Ehec013136.1
Basic Information
- Insect
- Eurema hecabe
- Gene Symbol
- lrrfip2
- Assembly
- GCA_026213755.1
- Location
- JADANM010001810.1:1092434-1103295[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.3e-77 2e-72 244.5 22.1 1 298 41 334 41 336 0.89 2 2 0.046 1.1e+03 -1.0 4.5 134 230 369 402 340 411 0.49
Sequence Information
- Coding Sequence
- ATGTACACCAAGACAATACCCCATAACTCATTGACGTATGACTCGCGGGAAATGCTGGCTGTCTCAGTTATGAATCAGATGGTTTGCATGTTTGGAATACTCGGAGACCAACACAATCATGCGGAGCAAAGGCTGGCGGCGCGGCGGGCAGCTCGCGCTGAGGCCAGGGAGATCCGCATGCGAGAGCTTGAGAGGCAGCAGCGGGAACAGGAGGACCATGCTGACAAGGCTTACGACATGTATGCAGAGAGCGTCGGGCGCCGCGGCGGCACCAGGCTGGCGGCGCTCAGCCCCGGCGGGCTGCACTCGCCCAGGAGGAGCTCGGAGGACTCTGACGAAGTGCTCAGCATTAAGGATTTGAGGCATGAATTAAAAGAAGTTGAAGAGAAGTTCCGCAAGGCGATGATACTGAACGCGCAGCTGGACAACGACAAGGCGGCGCTCGGCTACCAGCTCGAGCTGCTCAAGGACCGGATAGAGGAGCTGCAGGAGGAGTACGCGCAGCTACAGCGCGAACACAAGGAGAAGTGCTCGGCGCACGAGCGGCTGAAGCGCGAGCACGCGTCGCTGGAGCGCGAGGTGGGCGCGGCGCGGGACGCCGTGCGCGCGCGCGACGCCGCCGCCGACCGCGCCGGATACGCCTTCGTCGAGGCGGGCGAGCTGCACGCCGAGGGCGAGGGGGGGCAGGGCGAGGGGGCGGGGGTGCAGGGCGAGGCGTTCGGGTCAGTGCCGCCGCTCGCGCTCGTGTCGCACCGCGCGCAGGCGCTGCTCGACGACAGCGGGGAGGGCACGCTAGATGTCCGGTTGCAAAACTTAGCAAACGCGAAACAAGCGCTGGAGTCGGAGGTGCGCAAACTGAAGCTGCAGTTGAACGAGGAGCGCTCGGCGCGACACAACGGCGTGGCCTCCGCGCACGACCTCGACTACGAGACTGAGCTGGAGGCGGCGCGCAAGGCGGTGTCGGAGGCGAAGGGGCGCGCGGCGCGCGCGGAGGCCGAGGCGGCGCTGCAGGCCGGCGCCGTCGCGCGCCTCGAGGGGCAGCTGCAGCGCCTGCGCGCGCACCACGACCTGCAGGACGAGCGCGAGCAGGCGCTCAAGCAGGACCGCCGCCGTCTGCAGCGCGAGGCTCGGGAAGCCCTGAACAGAGTTGAGGAGTTGGAGACGGAGAACAGTCACCTCACCAAGCGGTTGGACAAACTGAAGAATGCCAAGTCTGCGCTTCTCAAAGAGCTGTGA
- Protein Sequence
- MYTKTIPHNSLTYDSREMLAVSVMNQMVCMFGILGDQHNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAESVGRRGGTRLAALSPGGLHSPRRSSEDSDEVLSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELQEEYAQLQREHKEKCSAHERLKREHASLEREVGAARDAVRARDAAADRAGYAFVEAGELHAEGEGGQGEGAGVQGEAFGSVPPLALVSHRAQALLDDSGEGTLDVRLQNLANAKQALESEVRKLKLQLNEERSARHNGVASAHDLDYETELEAARKAVSEAKGRAARAEAEAALQAGAVARLEGQLQRLRAHHDLQDEREQALKQDRRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01193604; iTF_00358580; iTF_01562023;
- 90% Identity
- -
- 80% Identity
- -