Zces001322.1
Basic Information
- Insect
- Zerene cesonia
- Gene Symbol
- lrrfip2
- Assembly
- GCA_012273895.1
- Location
- CM022622.1:9625453-9650882[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-78 2.4e-74 250.2 19.9 1 297 76 363 76 366 0.88 2 2 1 1.6e+04 -7.0 12.1 124 170 382 428 370 440 0.51
Sequence Information
- Coding Sequence
- ATGATGGTTAAGTTGGGACTAGCGATGGTGGTGGGTGTGGCCCCGGCGCTGGTCTCGTGGTGGCGCGGCCACGGGCCGTGGCTGCAGCCGCTGGTGACGTCATCCCCTTGCCTCGAGCGGGCTAAGCCATGGCCCGCGAGACGGTCACCGTCCCTGTCTGATTGCTTGGAGAGCAGCGATGAGGACTCGGCTAGATCTGTCGTGTGCCATGTGAGGCCGAAAATGGCGGAGCAGCGGCTGGCTGCGCGGCGGGCTGCCCGGGCTGAGGCGCGCGAGATCCGCATGCGAGAGCTGGAACGGCAGCAGAGGGAACAGGAGGACCATGCCGACAAGGCTTACGACATGTATGCAGAAACTGTGGGACGTCGAGGTGGAGCCAGGTTAGCCGCGTTGAGCCCGGCCGGTCTCCACTCGCCCAGACGGAGTTCAGAGGATTCTGATGAAGTGCTCAGTATAAAAGACTTGAGGCACGAACTAAAAGAAGTGGAGGAGAAGTTCCGCAAAGCGATGATATTGAATGCTCAGTTGGATAACGACAAGGCGGCGCTCGCCTACCAGTTGGAGCTGCTCAAGGATCGGATAGAGGAGTTGCAGGAAGAATACGCGCAACTACAGCGTGAACACAAAGAGAAGTGCTCATCGCACGAGCGGCTGAAGCGCGAGCACGCGGCGCTCGAGCGCGAGCTGGGCGCGGCGCGCGACGCCGTGCGCGCGCGCgacgccgccgccgccgacgCGGGCTTCGCCTTCGTGGACGCGGGCGACGCGGCGCCCGCGGCCGCCGGGGGCGCCGGGGGCGCCGGGGGTGGGGGCGCCGTGCCCGCGCTCGCGCTCGTCTCGCACCAGTCGCAGGCGCTGCTGGAGGACGGGGGCGAGGGGACGCTGGATGTCCGGTTGCAGAATTTAGTGAATTCGAAGCAGGCATTAGAATCGGAAGTGCGCAAACTCAAACTGCAACTGAACGAGGAACGAGCGGCTCGACAGAACGGAGTAGCCTCACATCACGATCAGGACTATGAGAACGAAGTGGAGACGCTGCGCAAGTGCGTGTCGGAGGCGAAGgggcgcgcggcgcgggcggaGGCCGAGGCGGCGCTGCAGGCCGGCGCCGTGGCGCGCCTCGAGGCGCAGCTGCAGCGCCTGCGCGCGCACCACGACGCGCAGGACGAGCGCGAGCAGGAGCTCAAGCAGGAGCGCCGCCGCCTGCAGCGCGAGGCTAGGGAGGCGCTCAATCGCGTAGAAGAATTGGAGACGGAGAACAGCCACCTCACCAAGCGGCTGGACAAGCTGAAGAACGCCAAGTCCGCTCTGCTCAAGGAGCTGTGA
- Protein Sequence
- MMVKLGLAMVVGVAPALVSWWRGHGPWLQPLVTSSPCLERAKPWPARRSPSLSDCLESSDEDSARSVVCHVRPKMAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRGGARLAALSPAGLHSPRRSSEDSDEVLSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALAYQLELLKDRIEELQEEYAQLQREHKEKCSSHERLKREHAALERELGAARDAVRARDAAAADAGFAFVDAGDAAPAAAGGAGGAGGGGAVPALALVSHQSQALLEDGGEGTLDVRLQNLVNSKQALESEVRKLKLQLNEERAARQNGVASHHDQDYENEVETLRKCVSEAKGRAARAEAEAALQAGAVARLEAQLQRLRAHHDAQDEREQELKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00710225;
- 90% Identity
- -
- 80% Identity
- -