Basic Information

Insect: Eupithecia vulgata
Gene Symbol: -
Assembly: GCA_946478135.1
Location: CAMLCK010000091.1:4486627-4490161[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.16 12 7.3 3.0 1 23 252 275 252 275 0.94

2 18 0.00036 0.027 15.6 2.2 1 23 280 303 280 303 0.98

3 18 8.6 6.4e+02 1.8 1.6 2 23 307 328 306 328 0.93

4 18 0.0058 0.43 11.8 0.4 1 23 333 356 333 356 0.98

5 18 0.00022 0.017 16.2 1.4 2 23 420 442 419 442 0.96

6 18 0.00012 0.0088 17.1 1.2 1 23 448 471 448 471 0.96

7 18 0.00035 0.026 15.6 0.3 2 20 475 493 474 495 0.94

8 18 0.013 0.97 10.7 0.3 2 23 504 526 503 526 0.95

9 18 0.00055 0.041 15.0 1.5 1 23 531 554 531 554 0.96

10 18 0.0016 0.12 13.5 0.3 2 23 567 588 566 588 0.96

11 18 0.012 0.86 10.8 0.9 1 23 594 616 594 616 0.97

12 18 4.2 3.1e+02 2.8 0.2 2 16 622 635 621 641 0.74

13 18 9.1e-08 6.8e-06 26.9 0.4 2 23 653 674 653 674 0.97

14 18 7.8 5.8e+02 1.9 0.2 3 23 680 700 678 700 0.87

15 18 0.049 3.7 8.9 1.0 2 23 717 739 716 739 0.94

16 18 4.8e-06 0.00036 21.5 0.8 1 23 745 767 745 767 0.98

17 18 0.00076 0.057 14.6 6.7 2 23 774 795 773 795 0.96

18 18 0.02 1.5 10.1 3.6 1 23 801 824 801 825 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.16	12	7.3	3.0	1	23	252	275	252	275	0.94
2	18	0.00036	0.027	15.6	2.2	1	23	280	303	280	303	0.98
3	18	8.6	6.4e+02	1.8	1.6	2	23	307	328	306	328	0.93
4	18	0.0058	0.43	11.8	0.4	1	23	333	356	333	356	0.98
5	18	0.00022	0.017	16.2	1.4	2	23	420	442	419	442	0.96
6	18	0.00012	0.0088	17.1	1.2	1	23	448	471	448	471	0.96
7	18	0.00035	0.026	15.6	0.3	2	20	475	493	474	495	0.94
8	18	0.013	0.97	10.7	0.3	2	23	504	526	503	526	0.95
9	18	0.00055	0.041	15.0	1.5	1	23	531	554	531	554	0.96
10	18	0.0016	0.12	13.5	0.3	2	23	567	588	566	588	0.96
11	18	0.012	0.86	10.8	0.9	1	23	594	616	594	616	0.97
12	18	4.2	3.1e+02	2.8	0.2	2	16	622	635	621	641	0.74
13	18	9.1e-08	6.8e-06	26.9	0.4	2	23	653	674	653	674	0.97
14	18	7.8	5.8e+02	1.9	0.2	3	23	680	700	678	700	0.87
15	18	0.049	3.7	8.9	1.0	2	23	717	739	716	739	0.94
16	18	4.8e-06	0.00036	21.5	0.8	1	23	745	767	745	767	0.98
17	18	0.00076	0.057	14.6	6.7	2	23	774	795	773	795	0.96
18	18	0.02	1.5	10.1	3.6	1	23	801	824	801	825	0.95

Sequence Information

Coding Sequence: ATGGATGCATCAATTAAGAGCACTACAAAGAGACCTACTAAGAGAAGCCTTCAAGAGCAGCTGAACATAGAATGGCTAAAACAGCGCTTGAAGACAATTTTTCACTCCTCCCAGTACTGTTCCTTATGCCTCAAAACCGAAGGAGAATTCTACTCACTTGACAAGATGTTTGCGGCCAATGAGGAGCTATCTATGAGGCCGCTGAGAGAAGTGGTTAACTATGTTTTCAATTTTGATGTTGAGGAGTACATGTCGAGTGACATGATCTGTGAGCAATGTACTGAGAAGACAATACAATCTTTTATATTCATCTCAAACACCAAGAAATCATACCAAATACTTCGAAACTGTTTAAACGATTTGGAATCCAAAGTCGATGACATAAGCTGCACATTAGATAAACAAAACGACTATGAAAACTCCAACATAATGATTGTCATTGAATATGATGACGAGACTTGCAAACAATTGAAAGAACTGAATGCTGGGTGCAGCACTATCCTTACAGACAAACCTatcactaaaaataaagaattatgtgTTAAACACATACTGAGAgaatgtaatgaaaatattgGCCCGTTGATAATACCTACACCAAGAGTAGAAAAATACCCTAGAACCAATATTGGGAAGAGAAATAGTGCTGTGCAAGAAAAGGTACCAACACCAAATGTGACACTTAAAGAAGGCAAAATTGTCATAGAGCCTTTGGTTACAAACGCTATACCAGCATCACCAAGATTTAACACCTACTGCTGTACAACCTGTGACGATATCTTCACATCCTACAGATCTTTGAAAGAGCATGAAAAAGCTAAGCATAACTCGATAATTTACAAATGCAGGATTTGTGATAAAATCTACAACACCCAACAGTATTTAGATTATCATTATCGGTCTATGCATGATCAATCTAGATGCAAATTCTGTCAGAATCTATTCACAGCAGATAAATTCAATGAACATCTAAAAGAGATGCATGGAAATAACATCTACAGCTGTGGACAATGTGAATTGGTTTACTACGCAAAGGAGCAATTAGACACTCATCAAAGAACCACACACGGAATACTAATAGACAAAAATAGCAAGGTTTGTCTTATGTGTATGAAGAACATAACAGAATCAGAATTAAGCAACGTTAAAAGTCACAAATGCAAGTTCTCATGCCTGGAATGCCTTAAGTCACCGTGTATCCATTATAACTATTTAATGTCGTACAGAGAACAGATTTTGAATCATTCAACGTTAATACAGTGTCTGGATTGTGACTACACAACAAAAAGAAAGGAACATCTCATAACTCATGTCAACCGTGAACACTTGGATCACCATCCCTTCACTTGCGGTGACTGTGGAACGCAGTTCTACACTAAATTGTCCCTCAGAACTCACATAATGCAGTTCCATAAAGATCTGAAATGTCAGTACTGTGACGCCACTTTTAAGAACACAACACTCTTGCAAAGGCATCGTGCAGCTTGTAAGTTAATCAGTCGATTTCAGGAATGCCAAAAATGTGTAGCTTCTTTTGACACAGTTGAAGACTTGGAGAGGCACACCAAATTGAGCCATAGCGCAATTGTGTTCCCATGCTTGAAATGTAATAAAGAATTTCCCCTGAAATCTTCTTTACAAGAGCACCATCTAAAAGTGCACACTGGAATACAAACAAAGAAGAGAAGGAAGATTATAGAATGTACCTTATGTGATATAACATTCAGAAACCTCAAGGAAATGACTGAGCACGAGCAGTCACATGAGCCAGGGAAAGTGTACCCCTGCAAAGTGTGCCCCAAATCTTATCAAAGTCTTAAAGAAGTGTACATGCACAAACAAAGGCATTACACCAAGAAAATTCAATGTGCTGGCTGTAAAAAGTCAGTGATAAGCTCATATTACAACCAGCACAAGTTACGCTGCCCATACGTAAAGGAAGAAACCAGTGTAAACGTTTGCGACATCTGCGGCAAGGTTTTCTCAACACAGGCTAGTTTAAAAACGCACCAGCAAACCCACACAAGCCCTATACCATGTATACACTGTGGGAGGCGGATCAAACCGGCGTCCATGAAGCGCCATTTAGAAATATGGCACTCAAGTTACATTGGCTCCAACGAGACAAAATCTAGACATCTATTACTACACTGCGATGCCTGTAGCTATGTAACCCGAAAGAACAGTGACTATGAGAACCACATTAACAAAGTTCATTTGCAGATCAAGCCATACAGCTGTGATGTATGTGGAAAAGAGTTTTGTGGTAAGTCAAGGCTCGCTGAACATATGCGAATACATTCCACATCCCATGTCTGCTTTTGCCCGacatgtaataaaaaatttgcTAACAAAGTCTGTCTAAAAATGCATCTCAGACGTCACACGAATGAAAATCCTTACGAATGCAACATCTGCTCTGAAAAGTTCCGTTCTTCGAGTATAATGAAGACTCATAGATTGAAGAAGCACCATGATAAGACCATAGCCTGTCCTTTGTGCGATGCAATGTACCATTTAGTGGCAGAAATGAGGTTCCatgtaaaaaaaactcattGGAAGAGTCCTGAACCGTTTGATTATAAGAAAATCGTTTCTGAGGAGTATTACCATTTGTTCCAAGATAGGAGGCTCCAGAAACTGGGTGATGAAAATGGGTTACAGCCTGGTTATCTGTTATCATAA
Protein Sequence: MDASIKSTTKRPTKRSLQEQLNIEWLKQRLKTIFHSSQYCSLCLKTEGEFYSLDKMFAANEELSMRPLREVVNYVFNFDVEEYMSSDMICEQCTEKTIQSFIFISNTKKSYQILRNCLNDLESKVDDISCTLDKQNDYENSNIMIVIEYDDETCKQLKELNAGCSTILTDKPITKNKELCVKHILRECNENIGPLIIPTPRVEKYPRTNIGKRNSAVQEKVPTPNVTLKEGKIVIEPLVTNAIPASPRFNTYCCTTCDDIFTSYRSLKEHEKAKHNSIIYKCRICDKIYNTQQYLDYHYRSMHDQSRCKFCQNLFTADKFNEHLKEMHGNNIYSCGQCELVYYAKEQLDTHQRTTHGILIDKNSKVCLMCMKNITESELSNVKSHKCKFSCLECLKSPCIHYNYLMSYREQILNHSTLIQCLDCDYTTKRKEHLITHVNREHLDHHPFTCGDCGTQFYTKLSLRTHIMQFHKDLKCQYCDATFKNTTLLQRHRAACKLISRFQECQKCVASFDTVEDLERHTKLSHSAIVFPCLKCNKEFPLKSSLQEHHLKVHTGIQTKKRRKIIECTLCDITFRNLKEMTEHEQSHEPGKVYPCKVCPKSYQSLKEVYMHKQRHYTKKIQCAGCKKSVISSYYNQHKLRCPYVKEETSVNVCDICGKVFSTQASLKTHQQTHTSPIPCIHCGRRIKPASMKRHLEIWHSSYIGSNETKSRHLLLHCDACSYVTRKNSDYENHINKVHLQIKPYSCDVCGKEFCGKSRLAEHMRIHSTSHVCFCPTCNKKFANKVCLKMHLRRHTNENPYECNICSEKFRSSSIMKTHRLKKHHDKTIACPLCDAMYHLVAEMRFHVKKTHWKSPEPFDYKKIVSEEYYHLFQDRRLQKLGDENGLQPGYLLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00705410; iTF_00704387; iTF_00700421; iTF_00696806; iTF_00697705; iTF_00702316; iTF_00703315; iTF_00698685; iTF_00701438; iTF_00699487;
90% Identity: iTF_00699487;
80% Identity: -