Esub007236.1
Basic Information
- Insect
- Eupithecia subfuscata
- Gene Symbol
- lrrfip2
- Assembly
- GCA_963564075.1
- Location
- OY751100.1:1916797-1925273[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-72 3.7e-68 230.9 21.8 1 271 11 269 11 290 0.88 2 2 1 3.2e+04 -6.5 15.2 12 169 299 353 288 366 0.55
Sequence Information
- Coding Sequence
- ATGTTAGAACTTGGATTAATAGAGGATAAGGCGGAACAACGCCTAGCAGCTCGAAGGGCGGCGCGCGCGGAGGCTCGCGAGATCCGCATGAGGGAGTTGGAGCGGCAGCAGAGAGAACAGGAGGACCATGCAGACAAGGCGTATGACATGTATGCAGAGACGGTCGGCAGGCGGGCTCCTCGGCTGGCGGCTCTCAGTCCCGCGATCTCGCATTCGCCGCGGCGGAGTTCAGAAGACTCGGTAGACGAGTCCTTTAGTATCAAAGACTTGAGGCACGACCTAAAAGAAGTAGAAGAAAAGTTCCGAAAGGCGATGATCCTCAATGCCCAGCTGGACAACGACAAGGCGTCGCTGGGCTATCAGCTCGAGCTGCTGAAGGACCGGATCGACGAGCTGCAGGAGGACTACGCACAGTTGCAGCGAGAACACCGAGAGAAGTGTTCAGTCCACGAGCGGCTGAAACGCGAGCACGTTTGCGTGGAGCGCGAGCTAACCGCGGCGCGGGACGCCGTGCGGGCgcgcgacgccgccgccgccgccgccggccgcgtCTTCTGCGAGGCGCCGCCCGGCGCGCAGGCCGCCGGCTTCGGGGACGTGCCGCCGCTAGCACTGCTCACGCAGGAGGTGGACCAGCTACTGGGCGACGGAGAGGCCACGCTAGACGTACGGTTGCAGAATCTGGTCACCGCTAAGCAGTCTCTAGAAAGCGAAGTGCGCAAACTGAAGCTGACGTTAAACGAGGAGCGCGCCGCGCGACAGAACGGCGTCGCGTCGCATCACGACGAGCACTATGAGAACGAATTGGAGAGTCTCCGCAAGGTGGCGCTAGAAGCGaaggcgcgggcggcgcgcgcggagGCCGAGGCGGCGCTGCAGGCGGCGGCGAGCGCGCGGCTCGAGGCGCAGGTGCAGCGGCTGCGGCAGCGGCAGGGCGACCACGACGAGACCGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGCGCGCGAGGCCCTCAACCGGGTTGAAGAGCTGGAGACGGAGAATAGCCACCTCACCAAGCGACTTGATAAACTGAAAAACGCTAAATCTGCACTCCTCAAGGACCTGTGA
- Protein Sequence
- MLELGLIEDKAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRAPRLAALSPAISHSPRRSSEDSVDESFSIKDLRHDLKEVEEKFRKAMILNAQLDNDKASLGYQLELLKDRIDELQEDYAQLQREHREKCSVHERLKREHVCVERELTAARDAVRARDAAAAAAGRVFCEAPPGAQAAGFGDVPPLALLTQEVDQLLGDGEATLDVRLQNLVTAKQSLESEVRKLKLTLNEERAARQNGVASHHDEHYENELESLRKVALEAKARAARAEAEAALQAAASARLEAQVQRLRQRQGDHDETEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00432218;
- 90% Identity
- iTF_00705030; iTF_00700140;
- 80% Identity
- -