Eins000825.1
Basic Information
- Insect
- Eupithecia insigniata
- Gene Symbol
- lrrfip2
- Assembly
- GCA_947859395.1
- Location
- OX401997.1:15184623-15195560[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-72 5.7e-68 229.8 20.8 1 271 72 330 72 354 0.87 2 2 0.58 1.4e+04 -4.6 12.3 119 169 364 414 348 426 0.65
Sequence Information
- Coding Sequence
- ATGCGCAAGCGCCTCTTTTGCGCCACTATATCCCGTAGCCCGCATGTAACGGTGTGCTTAGCTCAGCTCGACGCCTTTGTCACCCGCATAATTTTGAGAACAATCCCCATGCTACCCCTAGCATGGGGATTGTTGCCCCCTAGCATGTTGAGAGTGGTTGTGTCAGATTTATCTGTTCTGGAAAATGTTAGAACTTGGATGAATGAAGCTAAGGCGGAACAACGCCTAGCAGCTCGAAGAGCGGCGCGCGCCGAGGCTCGCGAGATCCGTATGAGAGAGTTGGAGCGACAGCAGAGAGAACAAGAGGACCATGCTGACAAGGCGTATGACATGTATGCAGAGACGGTCGGCAGACGGGGTCCTCGGCTGGCGGCGCTCAGTCCGGCGATCTCGCATTCACCGCGGCGGAGTTCAGAAGACTCGGTGGACGAGTCCTTTAGTATCAAAGACCTGAGGCACGACCTAAAAGAAGTAGAAGAAAAGTTCCGAAAGGCGATGATCCTCAACGCCCAGCTGGACAACGACAAGGCGTCGCTGGGCTACCAGCTCGAGCTGCTGAAGGACCGGATCGACGAGCTGCAGGAGGACTACGCACAGTTGCAGCGAGAACACCGAGAGAAGTGTTCACTCCACGAGCGGCTGAAACGCGAGCACGTTTGTGTGGAGCGCGAGCTGACCGCGGCGAGGGACGCCGTGCGGGCGCGCGACGCAGCCGCCGCCGCCGCCGGTCGCGTGTTCTGTGAGGCGCCACCCGGCGCGCAGGCCGCCGGCTTCGGGGACGTGCCGCCGCTAGCACTGCTCACGCAGGAGGTGGATCAACTGCTGGGCGACGGAGAGGCCACGCTTGACGTACGGTTGCAGAATCTGGTCACCGCAAAGCAGTCTCTAGAAAGCGAAGTGCGCAAACTGAAGTTGACATTAAACGAGGAACGCGCCGCGCGACAGAACGGCGTCGCGTCGCATCACGACGAGCACTATGAGAACGAATTGGAGAGTCTCCGCAAGGTGGCGCTAGAAGCGAAGGCGCGGGCGGCGCGCGCGGAGGCCGAGGCGGCGCTACAGGCGGCGGCCAGCGTGCGGCTTGAGGCGCAAGTACAGAGGCTTCGGCAGCGGCAGGGCGATCACGATGAGACCGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGCGCGAGAGGCACTCAACCGGGTTGAAGAGTTGGAGACGGAGAACAGCCACCTCACCAAGCGACTTGATAAACTGAAAAACGCTAAATCTGCACTCCTCAAGGACCTGTGA
- Protein Sequence
- MRKRLFCATISRSPHVTVCLAQLDAFVTRIILRTIPMLPLAWGLLPPSMLRVVVSDLSVLENVRTWMNEAKAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRGPRLAALSPAISHSPRRSSEDSVDESFSIKDLRHDLKEVEEKFRKAMILNAQLDNDKASLGYQLELLKDRIDELQEDYAQLQREHREKCSLHERLKREHVCVERELTAARDAVRARDAAAAAAGRVFCEAPPGAQAAGFGDVPPLALLTQEVDQLLGDGEATLDVRLQNLVTAKQSLESEVRKLKLTLNEERAARQNGVASHHDEHYENELESLRKVALEAKARAARAEAEAALQAAASVRLEAQVQRLRQRQGDHDETEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00697364;
- 90% Identity
- iTF_00702919;
- 80% Identity
- -