Etri012189.1
Basic Information
- Insect
- Eupithecia tripunctaria
- Gene Symbol
- lrrfip2
- Assembly
- GCA_955876795.1
- Location
- OY041606.1:15702221-15721062[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.4e-72 1.9e-67 228.6 19.8 1 271 32 290 32 312 0.87 2 2 0.17 5.9e+03 -2.9 10.2 119 170 324 375 318 386 0.77
Sequence Information
- Coding Sequence
- ATGCGCAAGAGTCTATCGCGCTGCCGTTTCCGGCGCCCGCATTTAACGGTGTGCTTGACTCGGCTCGACACTTGTCGCCCGCATCATTTTGAGGCGGAACAACGCCTAGCAGCTCGAAGGGCGGCGCGCGCCGAGGCTCGCGAGATCCGCATGCGGGAGTTGGAGCGACAGCAAAGAGAACAGGAGGACCATGCTGACAAGGCGTATGACATGTATGCAGAGACGGTCGGCAGACGGGGTCCCCGGCTGGCGGCGCTCAGTCCAGCGATCTCGCATTCGCCGCGGCGGAGTTCAGAAGACTCGGTGGATGAATCCTTTAGTATCAAAGACTTGAGGCACGACCTAAAAGAAGTAGAAGAGAAGTTCCGAAAGGCGATGATCCTCAACGCACAGCTGGACAATGACAAGGCATCACTGGGTTACCAGCTCGAACTGCTGAAGGACCGAATCGACGAGCTACAGGAAGACTACTCACAGTTACAGCGAGAACACCGAGAGAAGTGTTCAGTCCACGAGCGGTTGAAACGCGAGCACGTCTGCGTGGAGCGCGAGCTAGTGGCGGCGCGGGACGCGGTGCGGGCgcgcgacgccgccgccgccgccgccggccgcgtCTTCTGCGAGGCGCCGCCCGGCGCGCAGGCCGCCGGCTTCGGGGACGTGCCGCCGCTAGCACTGCTCACGCAGGAGGTGGACCAACTGCTGGGCGACGGAGAGGCCACGCTAGACGTACGGTTGCAGAACTTGGTCACCGCAAAACAGTCTCTTGAAAGCGAAGTGCGCAAACTGAAGCTTACATTAAACGACGAACGCGCCGCGCGACAGAACGGCGTCACGTCGCATCACGATGAGCACTATGAGAACGAATTGGAGAGTCTCCGCAAGGTGGCGCTAGAAGCGAaagcgcgggcggcgcgcgcggaGGCTGAGGCGGCGCTGCAGGCGGCGGCGAGCGTGCGGCTGGAGGCGCAAGTGCAGCGGCTGCGGCAGCGGCAGGGCGACCACGACGAGACCGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGCGCGAGAAGCCCTCAACCGGGTTGAAGAGTTGGAGACAGAGAATAGCCACCTCACGAAGCGACTTGACAAACTTAAAAACGCTAAATCTGCACTTCTCAAGGACCTGTGA
- Protein Sequence
- MRKSLSRCRFRRPHLTVCLTRLDTCRPHHFEAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRGPRLAALSPAISHSPRRSSEDSVDESFSIKDLRHDLKEVEEKFRKAMILNAQLDNDKASLGYQLELLKDRIDELQEDYSQLQREHREKCSVHERLKREHVCVERELVAARDAVRARDAAAAAAGRVFCEAPPGAQAAGFGDVPPLALLTQEVDQLLGDGEATLDVRLQNLVTAKQSLESEVRKLKLTLNDERAARQNGVTSHHDEHYENELESLRKVALEAKARAARAEAEAALQAAASVRLEAQVQRLRQRQGDHDETEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00697364;
- 90% Identity
- iTF_00702919;
- 80% Identity
- -