Dpin006702.1
Basic Information
- Insect
- Dendrolimus pini
- Gene Symbol
- LRRFIP2
- Assembly
- GCA_949752895.1
- Location
- OX457128.1:22829527-22843056[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.7e-78 1.6e-73 248.6 29.2 1 297 13 293 13 295 0.90 2 2 1 3.5e+04 -6.4 16.9 1 48 292 338 292 365 0.72
Sequence Information
- Coding Sequence
- ATGCGATACATGGATATGTATCGTATGGATACATGTGCAGAGCAGAGGCTAGCAGCGAGGAGAGCTGCTCGAGCGGAAGCTCGTGAAATTCGCATGAGAGAGTTGGAAAGACAACAGAGAGAACAAGAGGACCATGCCGACAAGGCGTATGACATGTATGCAGagACTGTTGGACGACGAGGTGGAACCAGGTTGGCGGCACTCAGTCCTGCAGCAGTGCTCTCGCCCCGAAGAAGTTCGGAAGATTCAGCAGACGATTCGTTTAACATTAAGGACCTTAGACACGAACTCAAAGAGGTTGAAGAGAAGTTCCGCAAAGCGATGATATTGAACGCGCAACTTGATAATGATAAAGCTGCGTTGGGATACCAGTTGGAGCTACTCAAAGACAGGATAGAGGAATTACACGAAGAATATGCCCAGTTACAACGTGAGCACAGGGAGAAGTGTTCGGTTCACGAGCGTTTAAAGCGCGAGCATGTGTCCGTGGAGCGGGAGCTGGAAGCTGCGAGGGCCGCGGTCAGGGCGAGGGACTTCGCCGCCGCCGAAGCGGGCTTCGCTTTCGTCGAGGCCTCCGTGCAGACGAGCACCGAGGACTTTGGGCCGGTGCCCCAGTTGGCGCTGGTCAGCCACCAGGCGGAGCAGCTGCTCAATGACGCCGGGGAGGGGACGCTGGATGTGCGGTTGCAGAAATTGGTCGGCTCTAAACAAGCTTTGGAGTCTGAGGTGCGCAAGCTGAAGCTGCAGTTGAACGAGGAGCGCGCAGCCAGGCAGAACGGCGTCGCAAACCACCACGACCAGGAGTACGAGAGCGAGCTGGAGTCGGCGCGCAAGTCGGCGAGCGAGGCGAAGGCGCGCGCGGCGCGCGCCGAGGCCGAGGCGGCGCTGCAGGCGGCGGCCGTGGCGCGGCTCGAGGCGCAGGTGGCGCGGCTGCGCGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCACCTCAAGCAGGAGAGGCGGAGGCTCCAGAGGGAGGCTCGCGAAGCCCTCAATCGAGTTGAAGAATTGGAGACCGAGAACAGCCATTTGACGAAACGACTCGACAAACTGAAGAACGCGAAGTCCGCATTGCTCAAGGACCTGTGA
- Protein Sequence
- MRYMDMYRMDTCAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRGGTRLAALSPAAVLSPRRSSEDSADDSFNIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSVHERLKREHVSVERELEAARAAVRARDFAAAEAGFAFVEASVQTSTEDFGPVPQLALVSHQAEQLLNDAGEGTLDVRLQKLVGSKQALESEVRKLKLQLNEERAARQNGVANHHDQEYESELESARKSASEAKARAARAEAEAALQAAAVARLEAQVARLRARQDHQDEHEEHLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00638662; iTF_00702919;
- 90% Identity
- -
- 80% Identity
- -