Eexi001024.1
Basic Information
- Insect
- Eupithecia exiguata
- Gene Symbol
- lrrfip2
- Assembly
- GCA_947086465.1
- Location
- OX352230.1:1690637-1711958[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.2e-73 1.8e-68 231.3 20.5 1 271 119 377 119 399 0.88 2 2 0.32 7e+03 -3.7 13.9 116 170 408 462 396 472 0.69
Sequence Information
- Coding Sequence
- ATGGGACATCGTACAGAAATGGCTACCCCAGACCACAGTGACGAAGAGAGTGGTGATGCCTTCACTGACGGGGACTTTGGGGACTCCGATGACGAGACTATCCTGGAACGCGGCGTGAACCAAACGTCTGATATTCCTATCAATGAAACTGTGAATGAAGAAGTTAACCAAAAATTAACCAATGGTAATTCCCAAAATAATAGTTATATAGAGTCCCATGATGAACCAAAAACTAACGGACGTATAAGTGAACCATCTTGTGATGTGGAAAGCAGCATTGCAGCCGTTAGGAGGGATTCTCACGGTGATCAGAACCCTTCGATTGTTGGGATTATTGGAGACCAGCACAGCCATGCGGAACAGCGGCTGGCAGCTCGAAGGGCGGCGCGCGCCGAGGCCCGTGAGATCCGCATGAGAGAGTTGGAGCGACAGCAGAGAGAACAAGAGGACCATGCTGACAAGGCGTACGATATGTATGCAGAGACGGTCAGCAGACGAGGTCCTAGGCTGGCGGCGCTCAGTCCCGCGATCTCGCATTCACCGCGGCGGAGTTCAGAAGACTCGGTGGACGAGTCCTTCAGTATCAAAGACTTGAGGCACGACCTAAAAGAAGTAGAAGAGAAGTTCCGAAAGGCGATGATCCTCAACGCCCAGCTGGACAACGACAAGGCGTCGCTGGGCTACCAGCTCGAGCTACTGAAGGATCGGATTGACGAGCTGCAGGAGGACTACGCACAGTTACAGCGAGAACACCGGGAGAAGTGTTCAGTGCACGAGCGGCTGAAACGCGAGCACGTTTGCGTGGAGCGCGAGCTAACCGCGGCGCGGGACGCCGTGCGGGCGCGCGACGCTGCCGCCGCCGCCGCCGGCCGCGTGTTCTGTGAGGCGCCGCCCGGCGCGCAGGCCGTCGGCTTCGGGGACGTGCCACCGCTAGCGCTACTCACGCAGGAGGTGGACCAGCTGCTGGGCGACGGAGAGGCCACGTTAGACGTACGGTTGCAGAATCTGGTCACCGCAAAACAATCTCTAGAAAGCGAAGTTCGCAAACTGAAGCTGACACTAAACGAAGAACGCGCCGCGCGACAGAACGGCGTAGCGTCGCACCACGACGAGCACTACGAGAACGAATTGGAGAGTCTCCGCAAGGTAGCGCTAGAAGCGAAGGCGCGGGCGGCGCGCGCGGAGGCCGAGGCGGCGCTGCAGGCGGCGGCCAGCGCGCGGCTCGAGGCGCAAGTGCAGAGGTTGCGGCAGCGGCAGGAAAACCACGACGAGACCGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGCGCGAGAGGCACTCAACCGGGTTGAAGAGTTGGAGACGGAGAATAACCACCTCACCAAGCGACTTGATAAACTGAAAAACGCTAAATCTGCCCTCCTCAAAGACCTGTGA
- Protein Sequence
- MGHRTEMATPDHSDEESGDAFTDGDFGDSDDETILERGVNQTSDIPINETVNEEVNQKLTNGNSQNNSYIESHDEPKTNGRISEPSCDVESSIAAVRRDSHGDQNPSIVGIIGDQHSHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVSRRGPRLAALSPAISHSPRRSSEDSVDESFSIKDLRHDLKEVEEKFRKAMILNAQLDNDKASLGYQLELLKDRIDELQEDYAQLQREHREKCSVHERLKREHVCVERELTAARDAVRARDAAAAAAGRVFCEAPPGAQAVGFGDVPPLALLTQEVDQLLGDGEATLDVRLQNLVTAKQSLESEVRKLKLTLNEERAARQNGVASHHDEHYENELESLRKVALEAKARAARAEAEAALQAAASARLEAQVQRLRQRQENHDETEEQLKQERRKLQREAREALNRVEELETENNHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00697364;
- 90% Identity
- iTF_00706033; iTF_00701084; iTF_00703984; iTF_00697364; iTF_00698334; iTF_00696489;
- 80% Identity
- -