Evul015949.1
Basic Information
- Insect
- Eupithecia vulgata
- Gene Symbol
- lrrfip2
- Assembly
- GCA_946478135.1
- Location
- CAMLCK010000079.1:843962-856431[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6e-72 6.6e-68 229.9 19.3 1 271 119 377 119 398 0.88 2 2 0.92 1.3e+04 -4.2 14.4 116 170 408 462 396 472 0.69
Sequence Information
- Coding Sequence
- ATGGGACATCGTACAGAAATGGCTACCCCAGACCATAGTGACGAAGAGAGCGGAGATGCCTTCACTGACGGGGACTTTGGGGACTCCGATGACGAGACTATCCTGGAACGCAGCGTGAACCAAACGTCTGATATTCCTATCAATGAAACTGTCAATGAAGAAGTTAAGCCAAAATTAACCAATGGTAATTCACAAAATAATGGTTATATAGAGCCCCATGATGAACCAAAAACTAACGGACGTATAAGTGAACCATCTAGTGATGTGGGAAGCAGCATTGCAGCCGTAAGACGGGATTCTCACGGCGATCAGAACCCTTCGATTGTCGGGATAATTGGAGACCAACACAGCCATGCGGAACAGCGGCTAGCAGCTCGAAGGGCGGCGCGCGCCGAGGCTCGTGAGATCCGCATGAGAGAGTTGGAGCGACAGCAGAGAGAACAAGAGGACCATGCTGACAAGGCGTATGACATGTATGCAGAGACGGTCGGCAGACGGGGTCCCAGGCTGGCGGCGCTCAGCCCCGCGGTCTCGCATTCACCGCGGCGGAGTTCTGAAGACTCCGTGGACGAGTCCTTTAGTATCAAAGACTTGAGGCACGACCTAAAAGAAGTAGAAGAAAAGTTCCGAAAGGCGATGATCCTCAACGCCCAGCTGGACAACGACAAGGCGTCGCTGGGCTACCAGCTCGAGCTGCTGAAGGACCGGATCGACGAGCTCCAGGAGGACTACGCACAGTTGCAGAGAGAACACCGAGAGAAGTGTTCGGTGCACGAACGGCTGAAACGCGAGCACGTTTGCGTGGAGCGCGAGCTAACCGCGGCGCGGGACGCCGTGCGGGCgcgcgacgccgccgccgccgccgccggccgcgTGTTCTGTGAGGCGCCGCCCGGCGCGCAGGCCGCCGGCTTCGGGGACGTGCCGCCGCTAGCACTGCTCACGCAGGAGGTGGACCAGCTGCTGGGCGATGGAGAGGCCACGCTAGACGTACGGTTGCAGAATCTGGTGATCGCAAAACAGTCTCTGGAAAGCGAAGTTCGCAAGCTGAAGCTGACACTAAACGAGGAACGCGCCGCGCGACAGAACGGCGTCGCGTCGCACCACGACGAGCATTATGAGAACGAATTGGAGAGTCTCCGCAAGGTGGCGCTAGAAGCGaaggcgcgggcggcgcgcgcggAGGCCGAGGCGGCGCTGCAGGCGGCGGCCAGCGCGCGGCTCGAGGCGCAGGTGCAGAGGCTGCGGCAGCGGCAGGAGAACCACGACGAGACCGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGCGCGAGAGGCACTCAACCGGGTTGAAGAATTGGAGACTGAGAATAACCACCTCACCAAGCGACTTGATAAACTGAAAAACGCTAAATCTGCCCTCCTCAAGGACCTGTGA
- Protein Sequence
- MGHRTEMATPDHSDEESGDAFTDGDFGDSDDETILERSVNQTSDIPINETVNEEVKPKLTNGNSQNNGYIEPHDEPKTNGRISEPSSDVGSSIAAVRRDSHGDQNPSIVGIIGDQHSHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRGPRLAALSPAVSHSPRRSSEDSVDESFSIKDLRHDLKEVEEKFRKAMILNAQLDNDKASLGYQLELLKDRIDELQEDYAQLQREHREKCSVHERLKREHVCVERELTAARDAVRARDAAAAAAGRVFCEAPPGAQAAGFGDVPPLALLTQEVDQLLGDGEATLDVRLQNLVIAKQSLESEVRKLKLTLNEERAARQNGVASHHDEHYENELESLRKVALEAKARAARAEAEAALQAAASARLEAQVQRLRQRQENHDETEEQLKQERRKLQREAREALNRVEELETENNHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00697364;
- 90% Identity
- iTF_00699186;
- 80% Identity
- -