Eata000468.1
Basic Information
- Insect
- Eumaeus atala
- Gene Symbol
- lrrfip2
- Assembly
- GCA_017140195.1
- Location
- JAOYMN010050549.1:28501-38656[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-75 6.2e-71 239.5 25.4 1 297 102 385 102 388 0.88 2 2 1 2.3e+04 -7.9 17.7 1 44 384 427 384 462 0.63
Sequence Information
- Coding Sequence
- ATGGGGAACAGATCGGAACTAGCTACACCCGAGAACAGCGAAGACGAGACCGGAGATGCCTTCACCGACGGCGACTTTGGAGACTCCGACGATGCCACTATTATAGAGCGGAGTCCTGAATCAAAACTACCCGTCAACGAGACTATTAATGCTGGAGTCAAGACCGTCGAGAACGGGGTCGTGAATGGACACTCGGATTCGGAGGAGAACGGAAATGGGTTCGAAGTGAACGAGGGAGATCGGAGAGACTCGCACGGCAGCACGAGCTCTATTGTGGACATCCTCGGAGATCAGCTAAATCATGCGGAGCAGCGACTCGCGGCAAGACGTGCGGCGCGGGCGGAGGCGCGCGAGATCCGCATGCGCGAGCTGGAGCGACTGCAGCGTGAGCAGGAGGACCATGCCGACAAGGCGTACGACATGCACGCCGAGACAGTGGGGCGGAGGGCGGGCGGGCGGCTGACGGCTCTGAGTCCCGGGGTCCTGCACTCCCCGCGCCGCAGTTCGGAAGACTCTGACGATGTGCTCAGCGTGAAGGACCTCAGACACGAACTTAAGGAGGTGGAGGAGAAGTTCCGCAAGGCGATGATACTGAACGCGCAGCTCGATAACGACAAGGCAGCGCTCGCCTACCAGCTCGAGCTGCTCAAGGACCGCATGGAGGAGCTGCAGGAAGAGTACGCGCAGTTACAGAGAGAGCATCGCGAGAAGTGCTCTGCGCACGAGCGGCTGAAGCGCGAGCACGCGGCCACGGAACAGGAGGTGACGCTGGCGCGAGACGCAGTGCGCGCGCGGGATTCGGCTGCCGCCGCCGCAGGCTACACGTTCGTGGACGCCGCCTCCGTCCCGGACGCGCCGGACAGCGGCGAATCGCACGGCGCAGTGCCGCCGCTGGCGCTCGTGAGCCACGCCACCCAGCGCTTGCTCGACGACGCGGGAGAAGGCACACTCGATGTGCGGCTGCAGAACTTGGTGAGCTCGAAGCAGGCGCTGGAGGGCGAGCTGCGTAAGCTCAAGTTGCAGCTCAACGAGGAGCGCGCCGCGCGGCAGAACGGCGCCGCCTCGCGTATCGACCGCGACCACGAGACCGAGCTGGAAAGCTTACGGAAGACTGTATCGGAGGCCAAGAGTCGTGCGGCGCGCGCGGAGGCCGAGGCGGCGCTGCAGGCGGCCGCCGTGGCGCGGCTAGAGGCGCAGGTGGCGCGTCTGCGAGCTCGCCACGACCAGCAGGACGAGAGTGAGGAGCTGCTGAAGCAGGAGCGCAGGCGCCTGCAGAGGGAGGCGCGAGAGGCGCTGAACCGCGTGGAGGAGTTGGAGACGGAGAACAGTCACCTGACCAAGCGCCTCGACAAGCTCAAGAACGCCAAGTCCCAGCTGCTCAAGGACCTGTGA
- Protein Sequence
- MGNRSELATPENSEDETGDAFTDGDFGDSDDATIIERSPESKLPVNETINAGVKTVENGVVNGHSDSEENGNGFEVNEGDRRDSHGSTSSIVDILGDQLNHAEQRLAARRAARAEAREIRMRELERLQREQEDHADKAYDMHAETVGRRAGGRLTALSPGVLHSPRRSSEDSDDVLSVKDLRHELKEVEEKFRKAMILNAQLDNDKAALAYQLELLKDRMEELQEEYAQLQREHREKCSAHERLKREHAATEQEVTLARDAVRARDSAAAAAGYTFVDAASVPDAPDSGESHGAVPPLALVSHATQRLLDDAGEGTLDVRLQNLVSSKQALEGELRKLKLQLNEERAARQNGAASRIDRDHETELESLRKTVSEAKSRAARAEAEAALQAAAVARLEAQVARLRARHDQQDESEELLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSQLLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00261881; iTF_00925734; iTF_00786809;
- 90% Identity
- iTF_00261881;
- 80% Identity
- -