Eten000716.1
Basic Information
- Insect
- Eristalis tenax
- Gene Symbol
- lrrfip2_1
- Assembly
- GCA_905231855.1
- Location
- HG993128.1:2686167-2694099[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6e-113 6.3e-109 364.5 31.0 1 299 163 453 163 454 0.92 2 2 0.2 2.8e+03 -2.1 4.4 220 244 482 506 458 528 0.45
Sequence Information
- Coding Sequence
- ATGTCGGAAGTGATGCAGCACACAAATGGCGCGATCTTTGCTCCCCGAATCGCGGACAACGAGCAGGAGGAGACGAACAACAATTCAAAGGGTTCCCCGGGTTATGATGAAATCGGTGAGGAATTCGATTTTGGTGACAGTGAGCTCAGTGCGTTGAGCGGTGATGAGAATGAGTCTGTGCCTGTTGCGGAAAAGGCCGCCGGAGTGAACTCAAGTGATGCGTGTGAAACCGTAAATCGGTCGCTAGTGGCGAAACCGGCAAATCTATGCCTGGAACCGGCGAAAGATGCGCAAACCGATGCGTTTTGTCCAATTACGCCGCGAAAAATCGTCGACTGTGAGGAACAAGGGGGCAAGGCAGCGGTATCTGCCGGTGACGGTGAGAGTGCTTCCAATGGATACACCAGCGACGGAGTGGACAGCTATGCGGACGAGGAGGAAGATAACGGACTACTTGTGCACTTTTTAGGACAAGCCAATCAAATTGCTGAAGCGAGACTGGCAGCCAGACGGCAGGCACGTGCAGAAGCACGAGAGATTCGCATGCGCGAATTGGAACGCCAGCAAAAGGAACAGGAACAAAATGCCGATCGAGTATTTGACATGCAAACAGCTGCAGGCATTGATCCCCTCGCTCGATCACGCCTCACAACAGGCAGTGTCACAGCGGTGGTCAATTCCATTCGTACCGGATCGATGTCTTCCCGCCGAAGTAGTGAAGATTCACTGGAAGAAGAGGGACGCAGCTTACGTGATATTAGGCTTGAACTTAAGGATGTTGAGGAACGCTTTAGAAAGGCAATGATAGCCAATGCACAATTAGATAACGAACGAGCATCGCAATCCTATCAAATTCAACTGCTTAAGGATAAACTGGAAGAAATCGAAGAATCATTCTCCCAATTGCAACGTGAATTCAAAGAAAAAACACGCGAAGGCAATGCTCTAAAGCGAAACATTGACAAATTGACCGAAGAATTGAAGCTGGTTCATGGTCAGCTATCTGAACGCGATGCGCTCATAGCTGAACAGGGTTTGGTAATTGTAGCGGTAGAGAATGAGGATGGCTCTGATGCCAAACGTGCTCTAGTCACTATAGAGAATGCACAATTGTTAGGTTCTGTACAGGGTTCTCTCGATGTTCGACTTAAGAAGTTCAGCGAAGAGAAACAACAACTTCAGGCGGAAGTGCAAAATTTACAGGAACAATTAGAAAATGTTAAGACGCAGGGACGAGGACGAGGCAATTCAATGAATGGTCCACTCGGATCTGATGACGATTATGAAGCTCAAAGGGAAGCAAACAAGATTATCTCCGATTACAAATATAAACTTCAAAAAGCGGAACAAGAAATCGCTAGTCTACAAGCCAGCTTAGCTAGATCAGAAACACAAGTTATACGATATAAGAGCACAGCGGAAGCGGCTGAAAAGGCCGAAGCTGAATTGAAGATTGAAAGGAGAAAACTGCAGCGAGAGAACCGCGAAGCCATGGAACGATTAGAAGAACTAGAAACATCCAACAATCACCTTCTGAAACGACTAGATAAATTAAAGAATGCCAAGAGTGCACTTCTCAAAGAACTCTGA
- Protein Sequence
- MSEVMQHTNGAIFAPRIADNEQEETNNNSKGSPGYDEIGEEFDFGDSELSALSGDENESVPVAEKAAGVNSSDACETVNRSLVAKPANLCLEPAKDAQTDAFCPITPRKIVDCEEQGGKAAVSAGDGESASNGYTSDGVDSYADEEEDNGLLVHFLGQANQIAEARLAARRQARAEAREIRMRELERQQKEQEQNADRVFDMQTAAGIDPLARSRLTTGSVTAVVNSIRTGSMSSRRSSEDSLEEEGRSLRDIRLELKDVEERFRKAMIANAQLDNERASQSYQIQLLKDKLEEIEESFSQLQREFKEKTREGNALKRNIDKLTEELKLVHGQLSERDALIAEQGLVIVAVENEDGSDAKRALVTIENAQLLGSVQGSLDVRLKKFSEEKQQLQAEVQNLQEQLENVKTQGRGRGNSMNGPLGSDDDYEAQREANKIISDYKYKLQKAEQEIASLQASLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMERLEELETSNNHLLKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00315970;
- 90% Identity
- iTF_00671586; iTF_00672211; iTF_00670941;
- 80% Identity
- -