Basic Information

Insect: Eristalinus sepulchralis
Gene Symbol: lrrfip2
Assembly: GCA_944738805.1
Location: CALYJE010000198.1:370001-379242[+]

Transcription Factor Domain

TF Family: LRRFIP
Domain: LRRFIP domain
PFAM: PF09738
TF Group: Unclassified Structure
Description: LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 6.3e-114 1.2e-109 366.3 31.4 1 299 156 446 156 447 0.92

2 2 0.1 1.9e+03 -2.1 4.4 220 244 475 499 451 521 0.45

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	6.3e-114	1.2e-109	366.3	31.4	1	299	156	446	156	447	0.92
2	2	0.1	1.9e+03	-2.1	4.4	220	244	475	499	451	521	0.45

Sequence Information

Coding Sequence: ATGTCGGAAGTGATGCAGCACACGAACGGCGCGATCTACGCTCCGCGGATCATGAGTGACGAGGACGAGGAGCCAAATAACAACTCAAAGGGTTCCCCGGGTTATGATGAAATCGGTGAGGAATTCGACTTTGGTGACAGTGAGCTCAGTGCGTTAAGTGGTGACGAGTGCGTGACAGGAAAAGGCGCTAAAGTGAACTCAAGTGACGTGTGTGAGACCGTGAATGGGTCTACGAAACCCGCGAATCTAAGCCTGGAACCGGCGAAAGATGTGCCTACCGATGCGTTCTGTCCAATTACGCCGCGAAAAATAGTCGATTGCGAGGAAAGTGGCAAGGCAGCGAAGGCTGCCGGTGACGGTGAGAGTGCCTCAAATGGATACACCAGCGACGGCGCGGACAGCTATGCGGACGAGGAGGAAGATAACGGACTACTTGTGCACTTTTTAGGGCAAGCCAATCAAATCGCTGAAGCGAGACTGGCAGCCAGACGGCAGGCACGTGCAGAAGCACGCGAAATTCGCATGCGCGAATTGGAACGCCAGCAAAAGGAACAAGAACAAAATGCCGATAGAGTATTTGATATGCAAACAGCTGCTGGTATTGATCCACTCGCCCGATCACGCCTCACAACAGGCAGTGTCACAGCGGTGGTCAATTCCATTCGTGCCGGTTCGATGTCTTCCCGCCGAAGTAGTGAAGATTCACTGGAAGAAGAGGGCCGTAGCTTACGTGATATAAGGCTTGAACTTAAGGATGTTGAAGAACGCTTTAGAAAAGCAATGATAGCCAATGCACAATTAGATAACGAACGAGCATCGCAATCCTATCAAATTCAACTGCTTAAGGATAAACTGGAAGAAATTGAAGAATCATTCTCCCAATTGCAGCGTGAATTCAAAGAGAAAACACGCGAATGCAATGCTTTAAAGCGAAACATTGACAAATTGTCCGAAGAATTGAAGCTTGTTAATGGTCAGCTAACTGAACGTGATGCGCTCATAGCTGAACAGGGTTTGGTAATTGTAGCTGTAGAGAATGAGGATGGCTCAGATGCCAAACGTGCTCTAGTCACTATAGAGAATGCACAATTGTTAGGTTCTGTACAGGGTTCTCTCGATGTACGACTTAAGAAGTTCAGCGAAGAGAAACAACAACTTCAGGCAGAAGTGCAAAATTTACAGGAACAATTAGAAAATGTTAAGACACAGGGACGAGGACGAGGCAATTCAATGAATGGTCCACTCGGATCTGATGATGATTATGAAGCTCAAAGAGAAGCCAACAAGATTATCTCTGATTACAAATATAAACTTCAGAAGGCGGAACAAGAAATCGCTAGTCTACAAGCCAGCTTAGCTAGATCAGAAACACAAGTTATACGATATAAGAGTACAGCGGAAGCGGCTGAAAAAGCCGAAGCTGAATTGAAAATTGAAAGGAGAAAACTGCAGCGAGAGAACCGCGAAGCAATGGAACGATTAGAAGAACTAGAAACCTCCAACAATCACCTTCTAAAACGACTAGATAAATTAAAGAATGCCAAGAGTGCGCTTCTCAAAGAACTCTGA
Protein Sequence: MSEVMQHTNGAIYAPRIMSDEDEEPNNNSKGSPGYDEIGEEFDFGDSELSALSGDECVTGKGAKVNSSDVCETVNGSTKPANLSLEPAKDVPTDAFCPITPRKIVDCEESGKAAKAAGDGESASNGYTSDGADSYADEEEDNGLLVHFLGQANQIAEARLAARRQARAEAREIRMRELERQQKEQEQNADRVFDMQTAAGIDPLARSRLTTGSVTAVVNSIRAGSMSSRRSSEDSLEEEGRSLRDIRLELKDVEERFRKAMIANAQLDNERASQSYQIQLLKDKLEEIEESFSQLQREFKEKTRECNALKRNIDKLSEELKLVNGQLTERDALIAEQGLVIVAVENEDGSDAKRALVTIENAQLLGSVQGSLDVRLKKFSEEKQQLQAEVQNLQEQLENVKTQGRGRGNSMNGPLGSDDDYEAQREANKIISDYKYKLQKAEQEIASLQASLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMERLEELETSNNHLLKRLDKLKNAKSALLKEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00315970;
90% Identity: iTF_00672841;
80% Identity: -