Eper011500.1
Basic Information
- Insect
- Eristalis pertinax
- Gene Symbol
- lrrfip2
- Assembly
- GCA_907269125.1
- Location
- OU026149.1:2368649-2378158[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-114 3.8e-110 367.7 31.0 1 299 156 446 156 447 0.92 2 2 0.09 1.4e+03 -1.9 4.1 220 244 475 499 451 520 0.46
Sequence Information
- Coding Sequence
- ATGTCGGAAGTGATGCAGCACACAAATGGCGCGATCTACGCTCCCCGGATCGCGGACACGGACACGGACAACGAGCAGGAGGAGACGAACAACAATTCAAAGGGTTCCCCGGGTTATGATGAAATCGGTGAGGAATTCGACTTTGGTGATAGTGAGCTCAGTGCGTTGAGCGGTGATGAGAGTGTTCCAGTGCGGGAAAAAGTGAACTCAAGTGATCGGTCGCTAGTGGTGAAACCTGTAAATCTATGCCTGGAACCGGCGAAAGATTTGCAAACCGATGCGTTCTGTCCAATTACGCCGCGAAAAATCGTCGACTGTGAGGGACAAGGGGGCAAGGCAGCGGTATCTGCCGGTGACGGTGAGAGTGCCTCGAATGGATACACCAGCGACGGAGTGGACAGCTATGCGGACGAGGAGGAAGATAACGGACTACTTGTGCACTTTTTAGGACAAGCCAATCAAATTGCTGAAGCGAGACTGGCAGCCAGACGGCAGGCACGTGCAGAAGCACGAGAAATTCGCATGCGCGAATTGGAACGCCAGCAAAAGGAACAAGAACAAAATGCCGATCGAGTATTTGATATGCAAACAGCTGCAGGCATTGATCCACTCGCTCGATCACGCCTCACAACAGGCAGTGTCACAGCGGTGGTCAATTCCATTCGTACCGGTTCGATGTCTTCCCGCCGAAGTAGTGAAGATTCACTGGAAGAGGAGGGACGCAGCTTACGTGATATTAGGCTTGAACTTAAGGATGTTGAGGAACGCTTTAGAAAGGCAATGATAGCCAATGCACAATTAGATAACGAACGAGCATCGCAATCCTATCAAATTCAACTGCTTAAGGATAAACTGGAAGAAATCGAAGAATCATTCTCCCAATTGCAACgtgaattcaaagaaaaaacGCGCGAATGCAATGCTCTAAAGCGAAACATTGACAAATTGACCGAAGAATTAAAGCTGGTCCATGGTCAGCTAACTGAACGTGATGCGCTCATAGCTGAACAGGGTTTGGTAATTGTAGCGGTAGAGAATGAGGATGGCTCAGATGCCAAACGTGCTCTAGTCACTATAGAGAATGCACAATTGTTAGGTTCTGTACAGGGTTCTCTCGATGTTCGACTTAAGAAGTTCAGCGAAGAGAAACAACAACTTCAGGCGGAAGTGCAAAATTTACAGGAacaattagaaaatgttaagaCGCAGGGACGAGGACGAGGCAATTCAATGAATGGTCCACTCGGATCTGATGACGATTATGAAGCTCAAAGGGAAGCAAACAAGATTATCTCCGATTACAAATATAAACTTCAAAAGGCGGAACAAGAAATCGCTAGTCTACAAGCCAGCTTAGCTAGATCAGAAACACAAGTTATACGATATAAGAGTACAGCGGAAGCGGCTGAAAAGGCCGAAGCCGAATTGAAGATCGAAAGGAGAAAACTGCAGCGAGAGAACCGTGAAGCAATGGAACGATTAGAAGAACTAGAAACCTCCAACAATCACCTTCTGAAACGACTAGATAAATTAAAGAATGCCAAGAGTGCGCTTCTCAAAGACCTCTGA
- Protein Sequence
- MSEVMQHTNGAIYAPRIADTDTDNEQEETNNNSKGSPGYDEIGEEFDFGDSELSALSGDESVPVREKVNSSDRSLVVKPVNLCLEPAKDLQTDAFCPITPRKIVDCEGQGGKAAVSAGDGESASNGYTSDGVDSYADEEEDNGLLVHFLGQANQIAEARLAARRQARAEAREIRMRELERQQKEQEQNADRVFDMQTAAGIDPLARSRLTTGSVTAVVNSIRTGSMSSRRSSEDSLEEEGRSLRDIRLELKDVEERFRKAMIANAQLDNERASQSYQIQLLKDKLEEIEESFSQLQREFKEKTRECNALKRNIDKLTEELKLVHGQLTERDALIAEQGLVIVAVENEDGSDAKRALVTIENAQLLGSVQGSLDVRLKKFSEEKQQLQAEVQNLQEQLENVKTQGRGRGNSMNGPLGSDDDYEAQREANKIISDYKYKLQKAEQEIASLQASLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMERLEELETSNNHLLKRLDKLKNAKSALLKDL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00315970;
- 90% Identity
- iTF_00672841;
- 80% Identity
- -