Eoch032099.2
Basic Information
- Insect
- Eremobia ochroleuca
- Gene Symbol
- -
- Assembly
- GCA_949629135.1
- Location
- OX451412.1:292737-312151[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6e-05 0.011 16.5 0.0 7 35 46 73 42 78 0.88 2 2 0.14 33 5.3 0.0 7 34 242 268 239 278 0.85
Sequence Information
- Coding Sequence
- ATGGACCATGGGATTCCTTTAAACATCCATGCAAGGCCGCGACTAGTTGGAAGACGACCGAACGAGATTGTTAACATAGAAACTGATGTTTTTCAAGAGAAATCTTATAAGCAATATTCGTCGCAACACCTTAGAGATGCCCTAATCGCagttaaaaaaggttacagtGTATACGCCGCCTCAAATAAGTACGGAGTGCCAAGGAAAACTTTACGGAATTGGATGGAAAAGTATGATATTAAGAGTCAGTTTTCAAAAGGTAGGCGCGGGGCCAGGACGCAGATTCTGGACCCGTTAGATCTCATGGTTGAGTCGAGGGCCGAGAAATATGATGATACGTTaggtaactattttactaatcaacaAAACCTCACAAAAAAATCTCTACCAACAGACTTCCCGATAGCAAACGTGCAGTGTCAGTACGACAGTCCATCGGACACGGAACCCGACCGGCACGGAGCAATCACACGACCGCCGGACGACCACACGTACGACATGCGTGACGAGCCGCCTGCATTCATCATACGACAAGTTAATAATTCCCTACGCCTCCAGAACTCCCCACACTTCCGCGAGATCAGACCTAAGATCATGACGATAGGGCCGGGCCCGTCGGCGTCAGTCAACGTTATACATGTCGGGGACCAGGCGCAGCCTCCCAGTATGCCGTCAGAGTTCAACATCAACAAGCGGATCCGACGCAGTGAGGTTGTGTTACGTCAGGCCGCAGACTGCGTCAGTCGCGGGTTGACCTTCCAGACTGTCTCCGAGCAGTTTAATATACCTATATCTACTATACGATTCTTCATGGCGCGAAAAGGTATTCTGCCACGACGTAGACGAGGCCGCAGTACTCAGCCAACTCGGCCCTGCAGTAGTCCGGAGCCTCCCTTCCACATGCAACACTTCAAACTGCCCGACATGGTCGCGCTGAGAGCCGACGATGAAGACCAGCCATCGCAGTAA
- Protein Sequence
- MDHGIPLNIHARPRLVGRRPNEIVNIETDVFQEKSYKQYSSQHLRDALIAVKKGYSVYAASNKYGVPRKTLRNWMEKYDIKSQFSKGRRGARTQILDPLDLMVESRAEKYDDTLGNYFTNQQNLTKKSLPTDFPIANVQCQYDSPSDTEPDRHGAITRPPDDHTYDMRDEPPAFIIRQVNNSLRLQNSPHFREIRPKIMTIGPGPSASVNVIHVGDQAQPPSMPSEFNINKRIRRSEVVLRQAADCVSRGLTFQTVSEQFNIPISTIRFFMARKGILPRRRRGRSTQPTRPCSSPEPPFHMQHFKLPDMVALRADDEDQPSQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01285482; iTF_00039747; iTF_00043433; iTF_00907824; iTF_01440978; iTF_01439873; iTF_00425321; iTF_00121381; iTF_00124195; iTF_00447081; iTF_00042571; iTF_01094860; iTF_01093033; iTF_01534766; iTF_00685379; iTF_01531955; iTF_01533877; iTF_00758101; iTF_00446071; iTF_01246843; iTF_00120455; iTF_00745632; iTF_01031087; iTF_01026115; iTF_01525956; iTF_00172839; iTF_00036626; iTF_00363965; iTF_00037758; iTF_00040758; iTF_01532985; iTF_00928627; iTF_00711797;
- 90% Identity
- iTF_00425321;
- 80% Identity
- -