Mimp055062.2
Basic Information
- Insect
- Mythimna impura
- Gene Symbol
- -
- Assembly
- GCA_905147345.1
- Location
- LR990368.1:15423658-15438405[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.8e-05 0.02 16.4 0.0 7 35 46 73 42 78 0.88 2 2 0.18 63 5.2 0.0 7 34 259 285 256 294 0.85
Sequence Information
- Coding Sequence
- ATGGACCATGGGATACCTCTAAACATCCACGCGAGACCACGCCTGGTAGGAAGACGGCCGAACGAGATCGTGAACATAGAGACTGACGTGTTCCAAGAGAAATCTTACAAGCAATATTCGTCGCAGCACCTTAGAGACGCCCTCATAGCTGTTAAAAAAGGATACAGCGTGTACGCAGCATCGAATAAGTATGGAGTCCCGAGAAAAACGTTGAGGAATTGGATGGAAAAGTATGATATTAAAAGTCAGTTTTCCAAAGGGAGACGTGGAGCCAGGACACAGATACTAGACCCGCTAGACCTCATGGTTGAGTCAAGGTCGGAGAAGTATGACGACACTTTAGAAGGCACGAGCAATGTTCCTTTTCTGTACCAGAAGTCACTTGCCTTACAGTGGCGCATTTTTCTACCAAACGaaaagtatgtagATTTCCCGATTGCAAACGTACAGTGTCAGTATGACAGTCCTTCAGACACGGAGACGGACAGGCACGGGCAGGTGGCAAGGCCACCGGACGATCATACGTACGACACGCGCGACGAACCACCCGCGTTCATCATACGACACGTCAATAATGCCCTACACCTCCAAAGCCCCCCACACTTCCGAGAGATAAGGCCTAAGATCATGACGATAGGCCCAGGTTCTTCGGCATCGGTCAACGTAATTCACGTGGGGGATCAAGCGCAGGCCAGCAGTATGCTGCTGCCCTCGCAACCCTCCTCGGAGTTTAGCATCAACAAGCGAATCCGTCGCAGCGAGGTGGTACTGCGCCAGGCAGCCGACTGCGTCAGCCGCGGCCTGACATTCCAGACTGTGTCAGAGCAGTTCAATATACCCATCTCTACTATACGATTCTTCATGGCAAGGAAGGGTATTCTTCCGCAACGTAGACGAGGCCGCAGTACTCAGccTACTCGACCCTGCAGTAGCCCAGAGCCTCCCTTTCACATGCAACACTTCAAACTACCCGACATGGTAGCATTGAGAGCTGATGACGAAGGCCCGCAGCCGCAGTAG
- Protein Sequence
- MDHGIPLNIHARPRLVGRRPNEIVNIETDVFQEKSYKQYSSQHLRDALIAVKKGYSVYAASNKYGVPRKTLRNWMEKYDIKSQFSKGRRGARTQILDPLDLMVESRSEKYDDTLEGTSNVPFLYQKSLALQWRIFLPNEKYVDFPIANVQCQYDSPSDTETDRHGQVARPPDDHTYDTRDEPPAFIIRHVNNALHLQSPPHFREIRPKIMTIGPGSSASVNVIHVGDQAQASSMLLPSQPSSEFSINKRIRRSEVVLRQAADCVSRGLTFQTVSEQFNIPISTIRFFMARKGILPQRRRGRSTQPTRPCSSPEPPFHMQHFKLPDMVALRADDEGPQPQ*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00667404;
- 90% Identity
- iTF_00425321;
- 80% Identity
- -