Mvit025703.2
Basic Information
- Insect
- Mythimna vitellina
- Gene Symbol
- -
- Assembly
- GCA_949316375.1
- Location
- OX438712.1:9798480-9808498[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-05 0.0088 16.5 0.0 7 35 46 73 42 78 0.88 2 2 0.036 28 5.3 0.0 7 34 246 272 243 281 0.85
Sequence Information
- Coding Sequence
- ATGGACCATGGGATACCTCTAAACATCCACGCGAGACCACGCCTGGTAGGAAGACGGCCGAACGAAATCGTGAATATTGAGACTGACGTGTTCCAAGAGAAGTCTTACAAGCAATATTCGTCGCAGCACCTTAGAGACGCCCTCATAGCTGTTAAAAAAGGATACAGCGTGTACGCAGCATCGAATAAGTACGGAGTCCCGAGAAAAACATTGAGGAATTGGATGGAAAAGTATGATATTAAAAGTCAGTTTTCCAAAGGAAGACGTGGAGCCAGGACACAGATACTGGACCCGCTAGACCTCATGGTTGAGTCGAGGTCGGAGAAGTATGACGATACTTTGGAGCTAGCATTAAGAGCCAAAGAAAAGAATGTAAAATGTAGTCAAGATTTCCCGATCGCAAACGTACAGTGTCAGTATGACAGTCCTTCAGACACTGAAACGGACCGGCACGGGCAGGTGTCAAGGCCACCGGACGACCATACATACGACACGCGTGACGAACCACCCGCGTTCATTATACGACACGTCAATAATGCCCTACACCTCCAAAGCCCCCCACACTTCCGAGAGATAAGGCCTAAGATCATGACGATAGGACCGGGTTCTTCGGCATCGGTCAACGTAATTCACGTGGGGGATCAGGCGCAGGCCGGCAGTATGCTGCTGCCCTCGCAACCCTCCTCGGAGTTTAGCATCAACAAGCGAATCCGTCGCAGCGAGGTAGTACTGCGCCAGGCAGCCGACTGCGTCAGCCGCGGCCTGACATTCCAGACTGTGTCAGAGCAGTTCAACATACCCATCTCTACTATACGATTCTTCATGGCAAGGAAGGGTATTCTCCCGCAACGTAGACGAGGCCGCAGTACTCAGCCTACTCGGCCCTGCAGTAGCCCAGAGCCTCCCTTTCACATGCAACACTTCAAACTACCCGACATGGTAGCATTGAGAGCTGATGACGAAGGCCTGCAGCCGCAGTAG
- Protein Sequence
- MDHGIPLNIHARPRLVGRRPNEIVNIETDVFQEKSYKQYSSQHLRDALIAVKKGYSVYAASNKYGVPRKTLRNWMEKYDIKSQFSKGRRGARTQILDPLDLMVESRSEKYDDTLELALRAKEKNVKCSQDFPIANVQCQYDSPSDTETDRHGQVSRPPDDHTYDTRDEPPAFIIRHVNNALHLQSPPHFREIRPKIMTIGPGSSASVNVIHVGDQAQAGSMLLPSQPSSEFSINKRIRRSEVVLRQAADCVSRGLTFQTVSEQFNIPISTIRFFMARKGILPQRRRGRSTQPTRPCSSPEPPFHMQHFKLPDMVALRADDEGLQPQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00667404;
- 90% Identity
- iTF_00425321;
- 80% Identity
- -