Basic Information

Gene Symbol
ARID5B
Assembly
GCA_963970395.1
Location
OZ019976.1:23566502-23580829[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.9e-24 5.5e-20 73.0 0.0 2 89 242 327 241 327 0.95

Sequence Information

Coding Sequence
ATGTTTGCAAGCTGGAAACTAGTTTACAATCTGGTGGTAGAAGACGAAGTGCTGACGATCTCAGAAAAGGTGGTGGTTCGCGTCCACGATCTGGTTACCTGGTTGTCTCCCACATTAGAATGGTCTTATGGACGAGAAATTGCAATTCCCCAGTCGCCAAAATTGGCGTCAGAGGACAACAACAGCCCTCAAAAATACGATGGAGCGTATCCCCAAGTCCTCACAGATCCAGGTATCGATTTTTCGGACGTTGATAAACAGCAGAAGGAATTCGAGACGACTCTTACTACGCCGAAGAAACCGGACAGCTTCGCGTTGCAACCGAGAGTGGTCGTGCTCTCATATCCGAGGTACTGCCGATATCGAGCCCTTCTTCGGAGGCTCGAAGGTACCGAACCTTCGTGGCTCGGTTCATCAGTCGCAGCGGCTCTCGGAGGTTTCACTGCACTTCCAGGAACAAGAGTACTCTTCTGCAGGGACACATTCGACTATCCAGACCTCGAAACTCACGAACTTCTCTGCAATCActtagCACCAAAACTGAAAGGAAGGCCAAGAAGAAAGCGCAAAAAGCGCAGCGTTTCACCTGGAGAATCGAGCAACGAGAGCGAAGCATCGGTCGCATCGACGTCACGTGGAGCGACGACAAATTTGAGCCTTGTGCCGGCTCTAAGACCACCATCCTCTGGTGTTCGTCGCAGCGAAAGAAACACAAGCGCCGAAGAGAAGAGGTTCGTCACCGACGTACACAGTTTCATGAGCTCGCGAGGTACACCCGTTGGAAAGATGCCGTTGCTGGGCTACAGGCAGATCGATCTCTTCCTATTTTATACGAAAGTACAGAAACACGGTGGTTACGATTCTGTGAGCGCTGGACGTCTCTGGAAATCGATTTACGATGACATCGGTGGAAACACGGGTTCCACTAGTGCCGCTACGATAACCCGGAGACACTACGAGAGGTTGCTGTTGCCATACGAGAGGCATCAGCGAGGCGAGGAGACGAAAGTGAGGCCTACGCACGGAAGGCGCACGAAATCCGGCAGTCTGTCCGAAGATTCGCTCGACGTTAAGCCGGAAATCGGAAGGACATGCACGTCCGAGACTCCACCACCACAGGAAGCGCCTACGGCTGCTTCCCCGGTTCCACCACTCCAGTCAATATTATCCTCATCGcCGTTCCTGCCTGGCGACAAGCCAAAGACTGAGGGCGGGAAGACATCGTCCCTGCGTAGCGTTAGAGTTAAACCGGAGCGTCTTAAATCGCTCAACACAATAATAGCAAACAGTACACCCGTTGTAAACCAAAACAGTCAACTGCCAAGTCCGAGTCCGCCGCCGTCGTCGAACACATCGGGTAACAACACGTCGACGTCGAACACGCCTAGCAATACGCCATCGACGACACCAACGAGTGGTAGCGGCGGTGGCGTTAGTCAGAGTGTTCTCGAGCGTCAGCTCAACAGTCCCTTGATATCTCAACAAGTGCCACCGTCGACGTCGCCCCCAGCGTTACCAGTGACGACGGTAACGACAAACGCGACGACAGTAGTGACGTTGACCCCGCCGCCGGAGAAGGACATGAAAGAGATGAAATTAGACCCAAAACCGGCAACGCTCTTAGCGCAAGGAAAGGAAAATATTCCATTATTCGGCGAGAAGCCTATATTCGCTGAAAAGGCTCTGGTACCGCCAAAATCCCCCGAAGTCATAGATCTTGAGATGGAAAATGACACAAGTCGCGACAAGATCGTTATACCGAGTTTCAAAAAGCGAAAATTGGAAATTCTTCGTGAAGGTGGCCTTGAAGTAACGGCCGTGGATCTCGACGCAAGACCAAGTGTAATACAAGCAACGATAACTCCCGTATCGGCGACTTCGCCGATTAAAACCGAGGAACAAAAAAGCAGTCAATCCTTTTCGGTTCCCACAACGCCAAACTCTGTACCTAAGCTGATTTCCGTGACGGTAACGCCGGACATCAGTCACATGTTGCCATCGCCTCAAGAGTCGCTAAATTCGAGTtctcagcagcaacaacagcatcaGCGACTTCCAACACCAACGAAAATGTCGAATAATCACAATCAGCCCGCTAACCAAATAAACAACAATAACAGTGCTGTTGCTAATAACAATAGTAATAATACTGTGAGCAGTAGAGTGATAAACGTCGGAAGTCCGAACAACGCGAGTTTGTTGCAACTTTACGCGAACGCCGCAACCGCTGCGGCAGCTTCGACGCCATCTACGTCGCCGTCGCCACCTGGTAATCATAGATTCGTACCGCCAACACCGCCCAACGAGAGGATAGCTGCCCCACCCAAAGTCACGCAATCTCGCTCAATATTCGCTAATACAGGCGACAAAATGGTCTACGGCAATCCTAAAGACATTCTGATACCCCAAAAGTATCATCACCCAATTCCGGCGCAACCGCAACATCATCCGGCTCCTCAAAACATGAGCAACACATCGAGCGGCGGAGTTCTCGATCTTACGCACAAACAATCTGCAGAACGATCTTTTGCGAGGCCCAATCTTGAAATCGTCCGAGTTCCCGTCGTTCCACGACCAAATCCCTTGAATTTGGAGATGAAAAATTCGATAAAGGACAAAACACTCGAGGCGCGAAAAGCTCCTTTTCCCGGATATCCGGGTATGCTCGATAGCAGAACTATGGCTTCAAATAACCTCGAGATCACGCTGGTGAATCCGAAACTTCGAGGGCATCCAGGCACGCCGCCGCAGGTTCACCAACCCTCGCCAAGTCCTCCAGCCGCGAGAATTCACAGTAACAACACGAATAACGTTAATAATACGTTGTCGAGTCAATCGACGCAGAGGCGCCATCAAAATGGTAAATATCCTTCGAGATCGGAGCCCGTGTCGCCTTACGCCTCGAGAAAGCCTAGTCATCCGCCGGTTATTCCAAACGTGCCGAATCTTCATCACCTCAACAATCAGCCTCATTCTTCGAGAACGAGCAGCattcaacaacaacaacagcaacaacaacacaTGTTCGCCGATAAGAGAAAAAATTCTGGTGATCCCaataatcatcatcatcatcatcatcgaagAATAAGCGAAAGCGAAAAATCGTCGATGTTAGCGCTACAGCAGCAGCTTCAGCAACATGAAATGCAGCAGCAACATCAGCAGCACAACAAAGCCGCCCAGAGACAGACGGACTCGGCGAGAAGACACAGCGTTCCTACGAGTATTCCGTCGGGCTTCATTCCCGCGGTGCCACAGAATTCACCCGCCTTCCTCTCGCAACTGCCCAATTCAGCAAGCAAGTTCCTACCGATGCTCGATCCATTGTACTACTCGGCGTTCTACAGCGGCCTCTTTCCGCCACCTATGACCGCGAACGCGACCCCTTACATACCACCTGAATTGAGCGCTTACTACAAGGAATTGCTAGCCTCGCAACCGAGACTCGCGGTCACCGGTCAGCATCAACCTGCTGTACCGACGTCCAAGTAG
Protein Sequence
MFASWKLVYNLVVEDEVLTISEKVVVRVHDLVTWLSPTLEWSYGREIAIPQSPKLASEDNNSPQKYDGAYPQVLTDPGIDFSDVDKQQKEFETTLTTPKKPDSFALQPRVVVLSYPRYCRYRALLRRLEGTEPSWLGSSVAAALGGFTALPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSVSPGESSNESEASVASTSRGATTNLSLVPALRPPSSGVRRSERNTSAEEKRFVTDVHSFMSSRGTPVGKMPLLGYRQIDLFLFYTKVQKHGGYDSVSAGRLWKSIYDDIGGNTGSTSAATITRRHYERLLLPYERHQRGEETKVRPTHGRRTKSGSLSEDSLDVKPEIGRTCTSETPPPQEAPTAASPVPPLQSILSSSPFLPGDKPKTEGGKTSSLRSVRVKPERLKSLNTIIANSTPVVNQNSQLPSPSPPPSSNTSGNNTSTSNTPSNTPSTTPTSGSGGGVSQSVLERQLNSPLISQQVPPSTSPPALPVTTVTTNATTVVTLTPPPEKDMKEMKLDPKPATLLAQGKENIPLFGEKPIFAEKALVPPKSPEVIDLEMENDTSRDKIVIPSFKKRKLEILREGGLEVTAVDLDARPSVIQATITPVSATSPIKTEEQKSSQSFSVPTTPNSVPKLISVTVTPDISHMLPSPQESLNSSSQQQQQHQRLPTPTKMSNNHNQPANQINNNNSAVANNNSNNTVSSRVINVGSPNNASLLQLYANAATAAAASTPSTSPSPPGNHRFVPPTPPNERIAAPPKVTQSRSIFANTGDKMVYGNPKDILIPQKYHHPIPAQPQHHPAPQNMSNTSSGGVLDLTHKQSAERSFARPNLEIVRVPVVPRPNPLNLEMKNSIKDKTLEARKAPFPGYPGMLDSRTMASNNLEITLVNPKLRGHPGTPPQVHQPSPSPPAARIHSNNTNNVNNTLSSQSTQRRHQNGKYPSRSEPVSPYASRKPSHPPVIPNVPNLHHLNNQPHSSRTSSIQQQQQQQQHMFADKRKNSGDPNNHHHHHHRRISESEKSSMLALQQQLQQHEMQQQHQQHNKAAQRQTDSARRHSVPTSIPSGFIPAVPQNSPAFLSQLPNSASKFLPMLDPLYYSAFYSGLFPPPMTANATPYIPPELSAYYKELLASQPRLAVTGQHQPAVPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2