Basic Information

Gene Symbol
ARID5B
Assembly
GCA_964017025.1
Location
OZ024777.1:8003180-8012375[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.3e-23 5.7e-20 71.9 0.0 2 89 240 325 239 325 0.95
2 2 0.068 1.7e+02 3.1 0.2 32 85 987 1041 971 1045 0.71

Sequence Information

Coding Sequence
ATGAGTTTCAAAGGATCCGCTAGAGACGGCCAAAAGCCAgACGAAGTTCTAACGATCTCGGAAAAAGTGGTGGTGCGCGTCCACGATCTGGTGACGTGGTTAGCCCCGTCGGTCGAGTGGTCCTGGGGCCGGGAAATCTCGATACCACAGTCGCCGAAGCCGTCGCCGGAGAACAACAGCCCTCAGAAGTACGATGCCCCGTATCCGCAGGTACTCACGGAGCCCGGGATCGATTTCTCGGACGTTGACAAACAGGAAAAGGAATTCGAGAGCAATCTCACGACGACAAAGAAGCAGGATGGCTTCTCGTCACAACCGAGGGTGGTCGTCCTGTCGTATCCGAGGTACTGTCGTTATCGGGCCCTACTTCGGAGACTCGAAGGCGCTGAGCCCTCGTGGCTGTGCTCTTCGGTCGCCGCGGCACTCGGAGGATTCACCGCACTTCCGGGAACTAGAGTTCTCTTCTGCAGGGACACATTCGACTATCCGGATCTTGAGACTCACGAGCTTCTGTGTAATCACCTAGcacCAAAGCTCAAGGGAAGGCCACGAAGAAAGCGGAAAAAACGTAGCGTTTCTCCCGGCGAGTCGAGCAACGAGAGCGAGGCTTCGGTGGCTTCGACGTCGAGAGGCGCGTCCTCGAACTCGAGCCTCGTGCCTGCCCTTAGACCACCGTCCTCCGGTGTTCGTCGCAGCGAGAGAAACACGAGCGCCGAGGAGAAGAGGTTCCTCACGGATGTCCACGGTTTCATGAGCTCGCGTGGTACGCCCGTCGGAAAGATGCCTTTGCTGGGCTACAGACAGATCGATCTCTTCCTATTTTATACAAAAGTCCAGAAGTTCGGTGGTTACGATACCGTGAGCGCCGGACGTCTCTGGAAAACGGTGTACGACGACATCGGTGGTAACACGGGATCCACGAGTGCCGCTACGATAACCCGAAGACACTACGAGAGGTTGCTGTTGCCCTACGAGAGGCATCAAAGAGGCGAGGAGACCAAGGTTAGGCCTACTCACGGAAGGCGAACGAAATCGAGCAGTCTGTCCGACGATTCGATCGAGTTTAAGTCGGAAATCGCAAGGACATGCACGTCGGAGACGCCACCACCGATGGAAGCGCCGACGGCCGCTTCACCGGTTCCACCAATCCCGTCAATCTTATCCTCATCGccgTTCCTACCTGGCGACAAGCCAAAGACTGAGGGCGGCAAGACATCGTCCCTGCGTAGCGTTAGAGTTAAGCCCGAGCGTCTGAAATCCTTGAACACGATAATAGCTAACAGTACACCAGTCGTTAATCAGAATAGTCAACTGCCAAGTCCGAGTCCGCCACCGTCGTCGAACACGTCGAATTCGTCGACGACCTCGAGCACGCCGAGCACGACGCCatcgacgacgccgacgagCGGCGGTGCCGTTAGTCAGAGTGTCCTCGAGCTCCAGCTCAACAGTCCGTTGATATCCCAGCAAGTGCCAGCGTCGGTGTCGCCGACGGTTCTCCCGGTCACGGAGGTAACGACCAACGCGTCGACAGTCGTGACGTTGACACCGCCACCGGAGAAGGACATAAAGGAGATGAAGCTCGATCCCAAACCGACGACACTCTTGGCCCAGGGAAAAGAGAACATACCGCTGTTCGGTGAAAAACCCATGTTCGCCGAGAAAGCTCTCGTACCGCCAAAATCGCCGGAAGTGATAGATCTCGAGATGGAGAACGACACGAGCCGCGACAAGATCGTCATACCGAGCTTCAAGAAGAGAAAATTGGAGATCTTACGCGAGGGCGGTCTCGAGGTGACGGCGGTCGAGTTAGACGCGAGACCGAGCGTAATTCAAGCGACGATCATCCCTGCCGAATCGCCCTTGTCGGCGAAGAGCGAGGAGAAGAGCAGCAGTCAACAGCCGATCTCGGCCTCTCCGGCTCCGAGCTCCGTGCCCAAACTGATCTCAGTCACGGTGACGCCGGACATCGGTCACATGCTGCCGTCGCCGCACGAACAGCAATCGCTGAGCAACTCTCATCACCCCCAGCAACAAGCGAGACATCAAACACCGACTAAGCCGCCGCCCAATCATCACAATCATCGAGCATCGCCGATCAATcaaacaaacaacaacaacagcgcCGTTGcgaacaacaacagcagcagcggcagcacgGTGAACAGTCGTGTGATAAACGTCGGAAGTCCGAACAACGCGAGTCTCTTGCAGCTCTACGCGAACGCGGCGAACTCGATACCGCCGACGTCGTCGCCCTCGCCACCGGGCAATCATCGTTTCGTACCGCCGACACCGCCCAACGAGAGGATATCCGCCCCGCCGAAGGTCATGCAGTCGCGCTCCATATTCGCCCACAGCGAGAAAATGGTCTACGGCAATCCCAAAGATATTCTGATACCCCAGAagtatcatcatcatcatcctcACGTCCAGCAGGCCCAGCATCTCTCATCGCCGCAAAACATGAGCAACAACTTGTCCGCCGGTGGTATTTTGGATCTCACGCAGAGGCAATCGGAGCGCTCGTTCGCGAGGCCGAATCTCGAGATCGTCAGAGTGCCCGTTGTGCCGAGGCCGAATCCGTTGAATCTGGAGATGAAGAGTGTCGCGGCAAAGGAGAAACCCATCGAGGCGCCGGCGAGAAAAGCGCCGTTTCCCGGCTATCCCGGTATGCTCGACAGCAGAACGATGGCGTCGAACAACCTCGAGATAACGCTCGTCAATCCCAAACATCGAGGGATTCCCGGCACTCCGCCACAGGTCCATCAACCCTCGCCGAGCCCGCCGGCTGCGAGGCTTCACAACAACAGCGGCGCTGCTAACGTCAACAACGCGATCTCGAGTCAGCCGACGCAGAGGCGTCATCAGAACGGCAAGTATCCGTCGAGATCGGAGCCGGTCTCGCCATACGCGTCGAGAAAGCCTAGTCATCCGCCGGTTATTCCGAACGTGCCGAATCTTCATCACCTCAACAGCGCTGCTTACTCGTCGAGAACGGGCGGAatgcaacaacagcagcaacaacatcAGCAGCAACAGTTGCATCAACAGCAGCACATGTACGTCGACAAGAGAAAAGCTTCGAACAACTCGCTTCAGAATCATCATCACAGGAGAATaagcgagagcgagaaatCGTCGATGATTGCTCatcaacagcaacaacaacaacagcagcagcagcaacaacagcagcaacaacagcagcaacagcagcaacaacagcaacaccAAATGCAACAGCACAAAGTCAACGCCGCCCAGAGACAAGCGGACTCCTCACGAAGGCACAGCGTGCCGACGAGCATACCTTCGGGTTTCATACCCAATATTCCACAAAATTCACCAGCCTTCCTCTCGCAAATGCCAAACACGGCAAGCAAGTTTCTACCGATGCTCGATCCACTTTACTACTCGGCCTTCTACAACGGCCTCTTTCCCGCGCCGATACCGACCGGCGCCGCGCCGTATATACCGCCCGAGTTCAGCGCTTACTACAAGGAACTACTGGCCTCCTCCCAACCGAGACTCGCCATCGCCGGACAGCATCAACCCGCTGTACCGACGTCGAAGTAG
Protein Sequence
MSFKGSARDGQKPDEVLTISEKVVVRVHDLVTWLAPSVEWSWGREISIPQSPKPSPENNSPQKYDAPYPQVLTEPGIDFSDVDKQEKEFESNLTTTKKQDGFSSQPRVVVLSYPRYCRYRALLRRLEGAEPSWLCSSVAAALGGFTALPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSVSPGESSNESEASVASTSRGASSNSSLVPALRPPSSGVRRSERNTSAEEKRFLTDVHGFMSSRGTPVGKMPLLGYRQIDLFLFYTKVQKFGGYDTVSAGRLWKTVYDDIGGNTGSTSAATITRRHYERLLLPYERHQRGEETKVRPTHGRRTKSSSLSDDSIEFKSEIARTCTSETPPPMEAPTAASPVPPIPSILSSSPFLPGDKPKTEGGKTSSLRSVRVKPERLKSLNTIIANSTPVVNQNSQLPSPSPPPSSNTSNSSTTSSTPSTTPSTTPTSGGAVSQSVLELQLNSPLISQQVPASVSPTVLPVTEVTTNASTVVTLTPPPEKDIKEMKLDPKPTTLLAQGKENIPLFGEKPMFAEKALVPPKSPEVIDLEMENDTSRDKIVIPSFKKRKLEILREGGLEVTAVELDARPSVIQATIIPAESPLSAKSEEKSSSQQPISASPAPSSVPKLISVTVTPDIGHMLPSPHEQQSLSNSHHPQQQARHQTPTKPPPNHHNHRASPINQTNNNNSAVANNNSSSGSTVNSRVINVGSPNNASLLQLYANAANSIPPTSSPSPPGNHRFVPPTPPNERISAPPKVMQSRSIFAHSEKMVYGNPKDILIPQKYHHHHPHVQQAQHLSSPQNMSNNLSAGGILDLTQRQSERSFARPNLEIVRVPVVPRPNPLNLEMKSVAAKEKPIEAPARKAPFPGYPGMLDSRTMASNNLEITLVNPKHRGIPGTPPQVHQPSPSPPAARLHNNSGAANVNNAISSQPTQRRHQNGKYPSRSEPVSPYASRKPSHPPVIPNVPNLHHLNSAAYSSRTGGMQQQQQQHQQQQLHQQQHMYVDKRKASNNSLQNHHHRRISESEKSSMIAHQQQQQQQQQQQQQQQQQQQQQQQQQHQMQQHKVNAAQRQADSSRRHSVPTSIPSGFIPNIPQNSPAFLSQMPNTASKFLPMLDPLYYSAFYNGLFPAPIPTGAAPYIPPEFSAYYKELLASSQPRLAIAGQHQPAVPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00652463;
90% Identity
iTF_00905201;
80% Identity
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