Tlin002074.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tromatobia lineatoria
Gene Symbol
ARID5B
Assembly
GCA_949699805.1
Location
OX453034.1:20243712-20253486[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.8e-24 3.5e-20 73.0 0.0 2 89 249 334 248 334 0.95

Sequence Information

Coding Sequence
ATGTGCAAAGCGAGACCTAAAGGCGCGGGTCTTTACCCTGCATTATTCTCACACATAACTTCTGCGGACGAAGTGCTGACGATCTCAGAAAAGGTTGTGGTTCGCGTCCACGATCTGGTTACATGGTTGTCTCCCACATTAGAGTGGTCGTATGGGCGGGAAATCGCAATTCCCCAGTCGCCAAAGTTATCGTCAGAGGACAGCCCTCAAAAATACGATGGAGCGTATCCCCAAGTCCTCACAGATCCTGGCATCGATTTTTCGGACGTTGATAAGCAGCAAAAGGAATTCGAGACCAATCTTACTACACCGAAATCACCACCGGACAGCTTCTCGTTGCAACCGAGGGTCGTCGTACTTTCGTATCCGAGGTACTGCCGATATCGAGCCCTCCTTCGAAGACTTGAGGGCACTGAACCATCGTGGCTCGGTTCCTCAGTCGCAGCCGCTCTCGGAGGTTTCACTGCACTTCCAGGAACAAGAGTACTCTTCTGCAGGGACACATTCGACTACCCGGACCTCGAAACTCACGAACTTCTCTGCAATCACTTAGcaCCAAAACTGAAGGGAAGGCCAAGAAGAAAGCGCAAAAAGCGCAGCGTTTCACCCGGCGAATCGAGCAACGAAAGTGAAGCATCGGTCGCATCGACGTCGCGAGGTGCGACGACCAATTTAAGTCTCGTGCCCGCTCTGAGACCACCGTCCTCAGGAGTTCGTCGTAGCGAGAGAAACACCAGCGCCGAAGAGAAGAGGTTCGTCACGGACGTACACAGTTTCATGAGCTCGCGAGGTACTCCCGTTGGGAAGATGCCGTTGCTGGGCTACAGGCAGATCGATCTCTTCCTATTTTATACGAAAGTACAGAAACACGGTGGTTACGATTCTGTGAGCGCTGGACGTCTGTGGAAATCGATTTATGATGACATCGGTGGAAACACGGGTTCCACTAGTGCCGCTACGATAACCCGAAGACACTACGAGAGGTTGCTGTTGCCATACGAGAGGCATCAACGAGGCGAGGAGACGAAAGTGAGGCCTACGCACGGAAGGCGCACGAAATCCGGCAGTCTGTCCGAAGATTCGCTCGACGTTAAGCCGGAAATCGGAAGGACATGCACGTCTGAGACTCCTCCACCACCGGAAGCGCCTACCGCCGCTTCCCCGGTTCCACCACTCCAGTCAATATTATCCTCATCGCCGTTCCTGCCTGGCGACAAGCCAAAGACTGAGGGCGGGAAGACATCGTCCCTGCGTAGCGTTAGAGTTAAACCGGAGCGTCTTAAATCGCTCAACACAATAATAGCAAACAGTACACCGGTTGTAAACCAAAACAGTCAACTGCCAAGTCCGAGTCCGCCGCCATCGTCGAATACATCGGGTAACAACACGTCGACGTCGAACACGCCTAGCAATACGCCATCGACGACACCAACGAGTGGCAGCGGTGGCGTTAGTCAGAGTGTTCTCGAGCGTCAGCTCAACAGTCCCTTGATATCTCAACAAGTGCCACCATCGACGTCGCCCTCACCGTTACCAGTGACGACGGTGACGACTAATGCGACGACAGTAGTAACGTTGACCCCTCCACCGGAGAAGGACATGAAAGAGATGAAATTAGACCCAAAACCGGCAACGCTATTAGCGCAGGGAAAGGAAAACATCCCCCTTTTCGGTGAGAAGCCAATATTCGCTGAAAAGGCTCTGGTACCCCCAAAATCCCCCGAAGTCATAGATCTGGAGATGGAAAATGACACGAGTCGCGACAAGATCGTTATACCGAGTTTCAAGAAGCGAAAACTGGAGATTCTACGCGAAGGAGGTCTCGAGGTAACCGCCGTGGATCTCGAAGCGAGACCAAGCGTTATACAAGCAACGATAACTCCCGTATCGGCGACATCGCCGATCAAAAACGAGGAACAAAAAAGCAGTCAGTCCTTTTCGGTTCCCACAACGCCAAACTCTGTACCTAAGCTGATATCCGTAACGGTTACGCCGGACATCAGTCACATGTTGCCATCGCCTCAAGAGTCGCAAAATTCGAGTtctcagcagcagcaacagcatcagCGACTTCCAACGCCAACGAAAACCTCCAATAATCACAATCAGCCCGCTAACCAaataaacaacaataacaatgcTGTTGTCAATAATAACAGCAATAATACTGTGAGCAGTAGAGTGATAAACGTCGGAAGTCCAAACAACGCGAGTTTGTTGCAGCTCTACGCGAACGCAGCGACGGCTGCGACGCCCTCTACGTCGCCGTCGCTTCCTGGCAATCACAGATTCGTCCCGCCAACGCCACCCAACGAAAGGATAGCTGCTCCACCAAAAGTCACCCAATCTCGCTCAATTTTCGCTAATACCGGCGACAAAATGGTCTACGGCAATCCTAAAGACATTCTGATACCCCAAAAGTATCATCATCCAATTCCGGCGCAACCGCAACATCATCCGGCTGCTCAAAACATGAGCAATCCCTCGAGCGGCGGAGTCCTCGATCTCACGCACAAACAAACTGCAGAACGATCATTCGCAAGGCCCAATCTCGAAATTGTTCGAGTTCCTGTGGTTCCGCGACCGAATCCCTTGAATTTGGAGATGAAAAATCTGATCAAGGACAAGACACTCGAGGCGCGAAAAGCTCCGTTTCCCGGATATCCGGGAATGCTCGACAGCAGAACTATGGCCTCGAATAATCTCGAAATCACGCTGGTTAATCCGAAACTCCGAGGACTTCCTGGTGCGCCGTCCCAGGTTCACCAACCTTCGCCCAGCCCGCCAGCCGCGAGAATTCACAGTAACAACACGAACAACGTTAATAATACGTTGTCGAGTCAGTCGACGCAGAGGCGTCATCAAAATGGTAAATATCCTTCGAGATCGGAGCCAGTGTCGCCTTACGCCTCGAGAAAGCCTAGTCATCCGCCGGTTATTCCAAACGTGCCGAATCTTCATCATCTAAACAATCAGCCTCACTCTTCGAGAACGAGCGGCatgcagcaacaacagcagcagcaacaacaacaacacatgTTCGTCGACAAGAGAAAAAATACTGGTGATCCCaataatcatcatcatcatcgaaGAATAAGCGAAAGCGAAAAATCGTCGATGTTAGCGCTACAGCAGCAGCTTCAGCAACACGaaatgcagcagcagcagcaacagcagcagcatcaacagcaCAATAAAACCGGCCAGAGACAGACGGACTCGTCGAGAAGACACAGCGTTCCTACGAGTATTCCGTCGGGCTTCATTCCCGCGGTGCCACAGAATTCACCCGCCTTCCTCTCACAACTGCCCAATTCAGCAAGCAAGTTCCTACCGATGCTCGATCCATTGTACTACTCGGCGTTCTACAGCGGCCTCTTTCCGCCACCTATGACCGCGAACGCGACCCCTTACATACCACCTGAATTCAGCGCTTACTACAAGGAATTGCTAGCCTCGCAACCGAGACTCGCGGTCACCGGTCAGCATCAACCTGCTGTACCGACGTCCAAGTAG
Protein Sequence
MCKARPKGAGLYPALFSHITSADEVLTISEKVVVRVHDLVTWLSPTLEWSYGREIAIPQSPKLSSEDSPQKYDGAYPQVLTDPGIDFSDVDKQQKEFETNLTTPKSPPDSFSLQPRVVVLSYPRYCRYRALLRRLEGTEPSWLGSSVAAALGGFTALPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSVSPGESSNESEASVASTSRGATTNLSLVPALRPPSSGVRRSERNTSAEEKRFVTDVHSFMSSRGTPVGKMPLLGYRQIDLFLFYTKVQKHGGYDSVSAGRLWKSIYDDIGGNTGSTSAATITRRHYERLLLPYERHQRGEETKVRPTHGRRTKSGSLSEDSLDVKPEIGRTCTSETPPPPEAPTAASPVPPLQSILSSSPFLPGDKPKTEGGKTSSLRSVRVKPERLKSLNTIIANSTPVVNQNSQLPSPSPPPSSNTSGNNTSTSNTPSNTPSTTPTSGSGGVSQSVLERQLNSPLISQQVPPSTSPSPLPVTTVTTNATTVVTLTPPPEKDMKEMKLDPKPATLLAQGKENIPLFGEKPIFAEKALVPPKSPEVIDLEMENDTSRDKIVIPSFKKRKLEILREGGLEVTAVDLEARPSVIQATITPVSATSPIKNEEQKSSQSFSVPTTPNSVPKLISVTVTPDISHMLPSPQESQNSSSQQQQQHQRLPTPTKTSNNHNQPANQINNNNNAVVNNNSNNTVSSRVINVGSPNNASLLQLYANAATAATPSTSPSLPGNHRFVPPTPPNERIAAPPKVTQSRSIFANTGDKMVYGNPKDILIPQKYHHPIPAQPQHHPAAQNMSNPSSGGVLDLTHKQTAERSFARPNLEIVRVPVVPRPNPLNLEMKNLIKDKTLEARKAPFPGYPGMLDSRTMASNNLEITLVNPKLRGLPGAPSQVHQPSPSPPAARIHSNNTNNVNNTLSSQSTQRRHQNGKYPSRSEPVSPYASRKPSHPPVIPNVPNLHHLNNQPHSSRTSGMQQQQQQQQQQHMFVDKRKNTGDPNNHHHHRRISESEKSSMLALQQQLQQHEMQQQQQQQQHQQHNKTGQRQTDSSRRHSVPTSIPSGFIPAVPQNSPAFLSQLPNSASKFLPMLDPLYYSAFYSGLFPPPMTANATPYIPPEFSAYYKELLASQPRLAVTGQHQPAVPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00652463;
90% Identity
iTF_00342929; iTF_00652463;
80% Identity
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