Lnyc002054.1
Basic Information
- Insect
- Listrodromus nycthemerus
- Gene Symbol
- ARID5B
- Assembly
- GCA_963978505.1
- Location
- OZ021679.1:28437225-28443700[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-23 3.1e-20 72.3 0.0 2 89 241 326 240 326 0.95 2 2 0.41 7.7e+02 0.5 0.5 32 67 988 1028 972 1048 0.60
Sequence Information
- Coding Sequence
- atgataattaatttccgttTGTTTGTCTCGCGTGTGTTTCAGGACGAAGTTCTAACGATCTCGGAAAAAGTGGTGGTGCGCGTTCACGATCTGGTGACGTGGTTGGCACCGTCGGTCGAGTGGTCGTGGGGTCGTGAAATCTCGATAGCGCAATCGCCAAAGTCATCGGCCGAGAGCAACAGTCCTCAGAAGCCCGACGCCACGTTTCCGCAGGTCCTCACGGAGCCGGGAATCGATTTCTCGGATGTTGACAAACAGGAGAAGGAATTCGAGAACAATctcacgacgacgaagaagcaAGATGGGTTCTCGTCACAACCGAGGGTGGTCGTTCTGTCGTATCCGAGGTATTGTCGTTATCGGGCGCTTCTGCGAAGACTGGAAGGCGCTGAGCCTTCGTGGCTGTGCTCTTCGGTCGCCGCCGCGCTCGGAGGATTCACCGCACTTCCGGGAACGAGAGTTCTCTTCTGCAGAGACACATTCGACTATCCGGATCTCGAGACTCACGAGCTTCTGTGCAATCACCTAGCACCAAAGCTTAAAGGGAGGCCGCgaagaaagcgaaaaaaacgcAGCGTTTCTCCCGGCGAGTCGAGCAACGAGAGCGAGGCTTCGGTGGCTTCGACGTCGAGAGGTGCGTCCTCGAACTCGAGCCTCGTGCCTGCCCTTAGACCGCCGTCCTCCGGAGTTCGTCGCAGCGAGAGAAACACGAGCGCCGAGGAAAAGAGGTTCCTCGCGGATGTCCACGGTTTCATGAGCTCGCGGGGTACGCCCGTCGGAAAAATGCCTTTGCTGGGCTACAGGCAGAtCGATCTCTTCCTATTTTATACAAAAGTCCAGAAGTTCGGTGGTTACGATACCGTGAGCGCCGGTCGTCTCTGGAAAACTGTTTACGACGACATTGGTGGAAACACAGGATCTACGAGTGCCGCTACGATAACCCGAAGACACTACGAGAGGTTGCTGTTGCCTTATGAAAGGCATCAAAGAGGCGAGGAAACGAAGGTTCGGCCTACTCACGGAAGGCGAACGAAATCGAGCAGTCTGTCCGACGAGTCGACCGAATTCAAGTCGGAAATCGGAAGGACATGCACGTCGGAAACGCCACCACCGATGGAAGCGCCGACGGCCGCTTCACCGGTTCCACCAATACCGTCAATCTTATCCTCATCGccgTTCCTACCTGGCGACAAGCCAAAGACTGAGGGCGGCAAGACATCGTCCCTGCGTAGCGTTAGAGTTAAGCCCGAGCGTCTGAAATCCTTGAACACGATAATAGCTAACAGTACACCAGTCGTTAATCAGAATAGTCAACTGCCAAGTCCGAGTCCGCCACCGTCGTCGAACACgtcgaattcgtcgacgacCTCGAGCACGCCGAGCACAACGccgtcgacgacgccgacgagcGGCGGTGCCGTTAGTCAGAGTGTCCTCGAGCTCCAGCTCAACAGTCCGTTGATATCCCAGCAAGTGCCAGCGTCAGTGTCGCCGACGGTTCTCCCGGTCACGGAAGTGACGACCAACGCGTCGACAGTCGTGACGTTGACACCGCCACCGGAAAAGGACCTCAAGGAGATGAAGCTCGATCCCAAACCGACGACGCTTCTGGCCCAGGGAAAAGAGAACATACCGTTGTTCGGTGAGAAACCAATGTTCGCCGAGAAGGCTCTCGTACCGCCAAAATCACCCGAGGTGATAGATCTCGAGATGGAGAACGACACGAGCCGCGACAAGATCGTCATACCGAGCTTCAAGAAGAGAAAATTGGAGATCCTACGCGAGGGCGGTCTCGAGGTGACGGCTGTCGAGTTGGACGCGAGACCGAGCGTCATTCAAGCGACGATCATCCCCGTCCCTGCCGAATCTCCCTTATCGGCGAAGAGCGAGGAGAAGAGCGGCGGTCAACAGCCGATCTCGGCCTCTCCGGCTCCGAGCTCCATGCCCAAACTGATCTCCGTCACGGTCACCCCGGACATCGGTCACATGTTGCCGTCGCCCCACGAACAGCAATCTCTGTCCAATTCCCATCACCCCCAGCAACAAGCGAGACATCAAACACCGATCAAGCAGTCGTCCAATTATCACAATCATCGAGCATCGCCGATCAACcaaacaaacaacaacaacaacagcgtTATGGCGAACAACAACAGTAGCAACGCGATTAACAGTCGCGTAATAAACGTTGGGAGTCCGAACAACGCGAGTCTTCTGCAGCTGTACGCTAACGCGGCGAACTCGATACACCCAACATCGTCGCCCTCGCCACCGGGTAATCATCGTTTCGTACCGCCGACACCGCCCAACGAGAGGATATCCGCTCCGCCAAAGGTCACCCAGTCGCGCTCGATTTTCGCCCACAGCGAGAAAATGGTCTACGGCAATCCCAAAGATATTCTGATACCCCAGAAGTATCATCAACACCATCCTCACGTCCAGCAGGCGCAACGTCTCTCCTCGCCGCAAAACATGAGCAACAATTTATCTGCCGGTGGTATTTTGGATCTCACGCAGAAGCAATCCGAGCGCTCGTTCACCAGGCCGAATCTCGAGATTGTCAGAGTGCCCGTTGTGCCGCGACCGAATCCTTTGAATCTTGAGATGAAGAGTGTCACGACGAAGGAGAAACCCGTCGAGGCGCCGTCGAGAAAAATGCCTTTCCCCGGCTATCCCGGTATGCTCGACAGCAGAACGATGGCGTCGAACAACCTGGAGATAACGCTCGTCAATCCCAAGCATCGAGGAATTTCCGGCACTCCGCCGCAGGTCCATCAACCCTCGCCGAGTCCGCCCGCTCCGAGGCTTCACAACAGCGGCGCTTCTGGCGTCAACAATACGATCTCGAATCAGCCGCCTCAGAGGCGTCATCAGAACGGCAAATATCCGTCGAGATCGGAGCCGGTCTCCCCTTACGCGTCGAGAAAGCCTAGTCATCCGCCGGTTATTCCCAACGTGCCGAATCTTCATCACCTCAACAGCGCCGCTTACTCCTCGAGAACGGGCGGTatgcagcaacaacagcagcagcagcagcagcagcaacagttgCATCAACAGCAGCACATGAGAATAagcgagagtgaaaaatcgtcgatgatcGCTcatcaacagcagcaacagcagcaacaccaAATGCAACAGCACAAAGTCAATGCCGCTCAGAGGCAAGCGGACTCCTCACGAAGGCACAGCGTGCCGACCAGCATACCCTCGGGTTTCATACCCAATATTCCACAAAATTCATCAGCCTTCCTCTCGCAAATGCCAAACACGGCAAGCAAGTTTCTACCGATGCTCGATCCACTTTATTACTCGGGCTTCTACAACGGCCTCTTTCCCGCGCCGATACCGACCGGAGCCGCGCCGTACATACCGCCCGAGTTCAGCGCTTACTACAAGGAACTACTGGCCTCCTCCCAACCGAGACTCGCCATCGCCGGACAGCATCAACCCGCTGTACCGACGTCCAAGTAG
- Protein Sequence
- MIINFRLFVSRVFQDEVLTISEKVVVRVHDLVTWLAPSVEWSWGREISIAQSPKSSAESNSPQKPDATFPQVLTEPGIDFSDVDKQEKEFENNLTTTKKQDGFSSQPRVVVLSYPRYCRYRALLRRLEGAEPSWLCSSVAAALGGFTALPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSVSPGESSNESEASVASTSRGASSNSSLVPALRPPSSGVRRSERNTSAEEKRFLADVHGFMSSRGTPVGKMPLLGYRQIDLFLFYTKVQKFGGYDTVSAGRLWKTVYDDIGGNTGSTSAATITRRHYERLLLPYERHQRGEETKVRPTHGRRTKSSSLSDESTEFKSEIGRTCTSETPPPMEAPTAASPVPPIPSILSSSPFLPGDKPKTEGGKTSSLRSVRVKPERLKSLNTIIANSTPVVNQNSQLPSPSPPPSSNTSNSSTTSSTPSTTPSTTPTSGGAVSQSVLELQLNSPLISQQVPASVSPTVLPVTEVTTNASTVVTLTPPPEKDLKEMKLDPKPTTLLAQGKENIPLFGEKPMFAEKALVPPKSPEVIDLEMENDTSRDKIVIPSFKKRKLEILREGGLEVTAVELDARPSVIQATIIPVPAESPLSAKSEEKSGGQQPISASPAPSSMPKLISVTVTPDIGHMLPSPHEQQSLSNSHHPQQQARHQTPIKQSSNYHNHRASPINQTNNNNNSVMANNNSSNAINSRVINVGSPNNASLLQLYANAANSIHPTSSPSPPGNHRFVPPTPPNERISAPPKVTQSRSIFAHSEKMVYGNPKDILIPQKYHQHHPHVQQAQRLSSPQNMSNNLSAGGILDLTQKQSERSFTRPNLEIVRVPVVPRPNPLNLEMKSVTTKEKPVEAPSRKMPFPGYPGMLDSRTMASNNLEITLVNPKHRGISGTPPQVHQPSPSPPAPRLHNSGASGVNNTISNQPPQRRHQNGKYPSRSEPVSPYASRKPSHPPVIPNVPNLHHLNSAAYSSRTGGMQQQQQQQQQQQQLHQQQHMRISESEKSSMIAHQQQQQQQHQMQQHKVNAAQRQADSSRRHSVPTSIPSGFIPNIPQNSSAFLSQMPNTASKFLPMLDPLYYSGFYNGLFPAPIPTGAAPYIPPEFSAYYKELLASSQPRLAIAGQHQPAVPTSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00652463;
- 90% Identity
- iTF_01364413; iTF_00059230; iTF_00721033; iTF_00057706; iTF_00058464;
- 80% Identity
- -