Basic Information

Gene Symbol
XBP1
Assembly
GCA_015832385.1
Location
JACTOM010000897.1:465128-469126[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.7e-18 2.1e-15 57.1 9.0 2 64 43 105 43 106 0.96
2 2 0.00047 0.59 10.8 0.5 33 55 88 110 87 114 0.89

Sequence Information

Coding Sequence
ATGAGCGCACCGATAATAATTACCGTTCCTAATAATTACCTGGTGGATGAGGTGGAGTCGAAGGTGGTCGTCGACGTGGCATCCCACCCACCCTCCAGGAAGCGAAGATTGGACCATCTAACATGGGAGGAGAAGATGCAGCGGAAGAAGCTGAAAAACCGTGTGGCAGCTCAAACATCACGGGACAGGAAAAAGGCGAAGATGGACGAAATGGAGAGTAGGATCCAACACTTCATGGACACCAACGAGCGCCTGATAGAGGAGGTGGAGAACCTGAAGGCGATGAACGAGCGCCTGGTGAGCGAGAACGCAGCACTACGCAGCGAGGCCGCGGCGCGGACCGTCGCGGGAGCCCCGAGACCAGCAGAGTCTCTTCCTCAGCAGAAGGAGGGGCCCCCGGCGGCGATCCGCGCGGTGCGCCTGCTGCTGACGATGTGGCTCCTATCGAGGAACTCCTCGCGCATTTCCAGTCCGACGAGTACCTCGACACCCTGCACCAGCTCGCAGACTCACTCCTCAAGGAGATTGATGCTGCTGCTGCAGGAGAGGCTCCACATGTCCAAGTCGGGAACACTGGAGAGTGCACTGCAAGAACTGAAGTGGTGGGGCCCGCAGCAGAGCAACTGGAACCCAGTGAAGGTGGAGTCCTAG
Protein Sequence
MSAPIIITVPNNYLVDEVESKVVVDVASHPPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESRIQHFMDTNERLIEEVENLKAMNERLVSENAALRSEAAARTVAGAPRPAESLPQQKEGPPAAIRAVRLLLTMWLLSRNSSRISSPTSTSTPCTSSQTHSSRRLMLLLQERLHMSKSGTLESALQELKWWGPQQSNWNPVKVES*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2