Basic Information

Gene Symbol
Xbp1
Assembly
GCA_029101505.1
Location
JAPJRL010000015.1:17008996-17011957[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2e-17 1.3e-14 54.6 8.3 2 62 43 103 43 106 0.94
2 2 0.00057 0.61 10.8 0.4 33 55 88 110 87 114 0.91

Sequence Information

Coding Sequence
ATGAGCGCTCCGATTATTATCACCGTCCCCAACTACCTGGCGGTGGATGATATGGAGTCGAAGGTCGTAGTCGACGTGGCTCCTAATACACCGTCCAGGAAGCGAAGATTGGATCATCTGACATGGGAGGAGAAGATGCAACGAAAGAAGCTGAAGAATCGTGTCGCGGCCCAAACTTCCCGGGACAGGAAGAAGGCCAAGATGGATGAAATGGAGAGCAGAATCAAATACTTCATGGACACGAACGAGCGGTTGATTGCTGAAGTAGAGAACTTGAAGGAGATCAATGAGAGGCTGATCAGCGAGAACGCAACGCTGCGCAGCGAGGCGGCGGCTCGGACCGTCGCGGGTGCCCCGAGACCAGCAGAGTCTCATCCTCAGCAGAAGGAGGGGCCCCCGCCGGCGATCCGAGCGGCGCGCCTGCTGCTAGCGATGTGCCTCCTCTCGCAGAGCTCCTCGCACAGTTCGACTCCGAAGAGTACCTTGACACCCTGCACCAGCTCGCAGACTCCCTCCTCAAGGAGATTAGTGCAGATGTTGCAGGAGAGACTCCAGATGTCAAAGTCGGGCAAACTGGACAGTGCACTGAAGGAGTTCAAATGGTGGGGCCCGCAACAGAGCAACTGGAACCCAGTCAAAGTGTAG
Protein Sequence
MSAPIIITVPNYLAVDDMESKVVVDVAPNTPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESRIKYFMDTNERLIAEVENLKEINERLISENATLRSEAAARTVAGAPRPAESHPQQKEGPPPAIRAARLLLAMCLLSQSSSHSSTPKSTLTPCTSSQTPSSRRLVQMLQERLQMSKSGKLDSALKEFKWWGPQQSNWNPVKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00642084;
90% Identity
-
80% Identity
-