Lcor016957.1
Basic Information
- Insect
- Lysandra coridon
- Gene Symbol
- XBP1
- Assembly
- GCA_905220515.1
- Location
- HG992081.1:585186-587364[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-16 3e-13 50.2 8.1 2 52 43 93 43 94 0.97 2 2 6.2e-05 0.07 13.8 0.7 32 55 87 110 85 114 0.90
Sequence Information
- Coding Sequence
- ATGAGCGCACCGATCATCATAACTGTACCCAATAATTACCTGACGGTGGATGAAATGGAGTCGAAGGTTGTCGTCGACGTATCTCCTCCACCGTCCAGGAAACGAAGATTGGACCATTTAACATGGGAGGAAAAGATGCAACGAAAGAAGCTGAAGAACAGAGTTGCAGCGCAGACCTCGAGAGACAGGAAGAAGGCGAAAATGGATGAGATGGAGGCCAAGATCCAGAAATTCATGGACATGAACGAGAGATTGATGGGTGAAGTGGAGAACCTCAAAGCGATGAACGAGAGGTTACTGAGCGAGAACGCAGCGCTACGCAGCGAGGCCGCGGCACGGAACGTCGCGGGAGCCCCGAGACCAGCAGAGTCTCTACCTCAGCAGAAGGTGGGGCCCCCGACGGCGCTTCGTGCGGCGCGCGTGCTGCTGGCGATGTGTCTCCTCTCACAGACCTCCTCTCTCAGCTCGACTCAGACCACTTCGACCTCGACGCCCTCCATCAACTTGCAGACTCCCTCCTCCAAGAGATTGATGCAGGTGCTGCAGGAGAGGCTGAAAATGTCGAAGTCCGGGAACCTAGAAGGTGCCCTGAAGGAGATAAAGTGGTGGGGCCCACAGCAGAGCAACTGGAACCCAGTAGAAGTGAGCTCGTAG
- Protein Sequence
- MSAPIIITVPNNYLTVDEMESKVVVDVSPPPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEAKIQKFMDMNERLMGEVENLKAMNERLLSENAALRSEAAARNVAGAPRPAESLPQQKVGPPTALRAARVLLAMCLLSQTSSLSSTQTTSTSTPSINLQTPSSKRLMQVLQERLKMSKSGNLEGALKEIKWWGPQQSNWNPVEVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00642084;
- 90% Identity
- iTF_00164036;
- 80% Identity
- iTF_00164036;