Basic Information

Gene Symbol
Xbp1_1
Assembly
GCA_963565745.1
Location
OY751442.1:5316979-5318547[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 4.1 6.1e+03 -1.5 0.0 15 25 28 38 27 39 0.77
2 3 1.4e-15 2.2e-12 48.0 7.2 2 52 43 93 43 96 0.96
3 3 0.00011 0.16 13.2 1.6 30 55 85 110 84 113 0.89

Sequence Information

Coding Sequence
ATGAGCGCACCGATCATCATAACTGTACCTAATAATTACCTGACGGTGGACGAAATGGAGTCGAAGGTTGTCGTCGACGTATCTCCACCAACGTCCAGGAAACGAAGATTGGACCATTTAACATGGGAGGAAAAGATGCAACGAAAGAAGTTGAAGAACAGAGTAGCGGCCCAGACATCAAGGGACAGGAAGAAGGCGAAAATGGATGAAATGGAtgccaaaatcaaaaaattcaTGGACATGAATGAAAGATTGATGGGAGAAGTCGAAAACCTGAAGGCAATGAACGAGAGGTTACTGAACGAAAATGCAACGCTACGCAGCGAAGCCGCGGCACGGGACGTCGCGGGAGCCCCGAGACCAGCAGAGTCTCTACCTCAGCAGAAGGTGGGGCCCCCGGCGGCGCTCCGTGCGGCGCGCGTGCTGCTGGCGATGTGTCTCCTCTCACAGACCTCCTCGCCCAGCTCGACTCCGACCACTTTGACCTCGATGCCCTCCATCAACTTGCAGACTCCCTCCTCCAGGAGATTGATGCAGGTGCTACAGGAGAGGCTGAAAATGTCCAAGTCCGGGAACTTGGAAGGTGCCCTGAAGGAGATCAAGTGGTGGGGCCCACAACAGAGCAACTGGAACCCGGTAAAAGTGAGCTCGTAG
Protein Sequence
MSAPIIITVPNNYLTVDEMESKVVVDVSPPTSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMDAKIKKFMDMNERLMGEVENLKAMNERLLNENATLRSEAAARDVAGAPRPAESLPQQKVGPPAALRAARVLLAMCLLSQTSSPSSTPTTLTSMPSINLQTPSSRRLMQVLQERLKMSKSGNLEGALKEIKWWGPQQSNWNPVKVSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00642084;
90% Identity
iTF_00164036;
80% Identity
-