Basic Information

Gene Symbol
Xbp1
Assembly
GCA_947172395.1
Location
OX359209.1:2791995-2796844[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.5e-17 2.1e-14 53.4 10.8 2 64 42 104 42 105 0.95
2 2 6.9e-05 0.058 13.6 0.7 32 55 86 109 85 114 0.91

Sequence Information

Coding Sequence
ATGAGCACGCCGATTATAATCACGGTGCCTAATTATCTGGCGGTGGATGATGAGTCGAAGGTTGTTGTCGACGTGGCGCCGAGTCCACCGTCCAGGAAACGAAGGCTGGATCATCTGACATGGGAGGAGAAGATGCAAAGAAAGAAGCTCAAGAACCGTGTGGCGGCACAGACCTCACGGGACAGGAAGAAGGCCAAAATGGATGAAATGGAAAGTCGGATCCAGCACTTCATGGACAAGAATGATCGGCTGATAGCGGAGGTGGAGAACTTGAAGGCGATGAACGAGAGGTTGCTCAGCGAGAACGCAGCGCTGCGCAGCGAGGCCGCGGCGCGGACCGTCGCGGGAGCCCCGGGACCAGCAGAGTCTCATCCTCAGCAGAAGGAGGGGCCCCCGCCGGCGCTCCGCGCGGCGCGCCTGCTGTTGACGATGTGTCTCCTCTCGCAGACCTCCTCGCACACCTCGACTCCGACGACTACCTCGACTCGCTGCACCAGCTCGCTGACTCCCTCCTCAAGGAGATTGATGCAACTGCTGCAGGAGAGGCTCACGATGTCAAAGTCGGGATCACTGGAGAGTGCGCTGAAGGAGCTGAAGTGGTGGGGCCCGCAGCAAAGCAACTGGAACCCGGTCAAAGTGGAGTCATAG
Protein Sequence
MSTPIIITVPNYLAVDDESKVVVDVAPSPPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESRIQHFMDKNDRLIAEVENLKAMNERLLSENAALRSEAAARTVAGAPGPAESHPQQKEGPPPALRAARLLLTMCLLSQTSSHTSTPTTTSTRCTSSLTPSSRRLMQLLQERLTMSKSGSLESALKELKWWGPQQSNWNPVKVES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00642084;
80% Identity
-