Basic Information

Insect: Ectropis grisescens
Gene Symbol: -
Assembly: GCA_017562165.1
Location: chr17:17611868-17654079[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 2.5e-05 0.0014 19.0 1.4 1 23 421 443 421 443 0.96

2 17 0.002 0.11 13.0 0.9 1 20 449 468 449 471 0.94

3 17 1.9e-05 0.001 19.4 5.4 1 23 490 512 490 512 0.98

4 17 8.2e-05 0.0046 17.4 4.1 1 23 518 540 518 540 0.99

5 17 3.1e-05 0.0018 18.7 5.3 1 23 546 568 546 568 0.97

6 17 8.6e-05 0.0048 17.3 6.7 1 23 574 596 574 596 0.97

7 17 1.6e-05 0.00092 19.6 6.4 1 23 602 624 602 624 0.98

8 17 4.1e-07 2.3e-05 24.6 1.9 1 23 630 652 630 652 0.98

9 17 4.2e-05 0.0024 18.3 7.9 1 23 658 680 658 680 0.98

10 17 2.1e-05 0.0012 19.2 6.6 1 23 686 708 686 708 0.98

11 17 3.8e-06 0.00021 21.6 5.2 1 23 714 736 714 736 0.98

12 17 6.9e-06 0.00039 20.7 5.0 1 23 742 764 742 764 0.96

13 17 9.2e-06 0.00052 20.4 5.2 1 23 770 792 770 792 0.98

14 17 8.2e-06 0.00046 20.5 5.6 1 23 798 820 798 820 0.98

15 17 0.00012 0.0069 16.8 7.7 1 23 826 848 826 848 0.97

16 17 3.7e-08 2.1e-06 27.9 2.6 1 23 854 876 854 876 0.99

17 17 0.00019 0.01 16.2 1.2 1 23 883 905 883 906 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	2.5e-05	0.0014	19.0	1.4	1	23	421	443	421	443	0.96
2	17	0.002	0.11	13.0	0.9	1	20	449	468	449	471	0.94
3	17	1.9e-05	0.001	19.4	5.4	1	23	490	512	490	512	0.98
4	17	8.2e-05	0.0046	17.4	4.1	1	23	518	540	518	540	0.99
5	17	3.1e-05	0.0018	18.7	5.3	1	23	546	568	546	568	0.97
6	17	8.6e-05	0.0048	17.3	6.7	1	23	574	596	574	596	0.97
7	17	1.6e-05	0.00092	19.6	6.4	1	23	602	624	602	624	0.98
8	17	4.1e-07	2.3e-05	24.6	1.9	1	23	630	652	630	652	0.98
9	17	4.2e-05	0.0024	18.3	7.9	1	23	658	680	658	680	0.98
10	17	2.1e-05	0.0012	19.2	6.6	1	23	686	708	686	708	0.98
11	17	3.8e-06	0.00021	21.6	5.2	1	23	714	736	714	736	0.98
12	17	6.9e-06	0.00039	20.7	5.0	1	23	742	764	742	764	0.96
13	17	9.2e-06	0.00052	20.4	5.2	1	23	770	792	770	792	0.98
14	17	8.2e-06	0.00046	20.5	5.6	1	23	798	820	798	820	0.98
15	17	0.00012	0.0069	16.8	7.7	1	23	826	848	826	848	0.97
16	17	3.7e-08	2.1e-06	27.9	2.6	1	23	854	876	854	876	0.99
17	17	0.00019	0.01	16.2	1.2	1	23	883	905	883	906	0.95

Sequence Information

Coding Sequence: ATGAACACGGAGCACCATAATATCAACCCGGGTGGTGGTCAACCTCCTGGGAGTTCAGAGTCTCAAGGACAAAGAGTGCAGGCTACACAACAGCAGCAACAAGGAAGTTTACCTGCCACGACGTCAGCCACGGATTTGCGAGTAAATACAGCAGCTGTAAATGTTGCTTTGTCCAGTGTAGCAAAGTATTGGGTATTTACGAACTTATTCCCTGGACCAATTCCGCAAGTCTCAGTTTATGGATTGCCTACCGGAACTAGAATTGAAAATGGAAAGCCTGTACAGGACATTGGCCAACATGCAAGCATACTTAATGGTGATCCAAACATCATATTGGGGCATCACAGTGGACAGTCACAAGTCACTGTGTCAGCGGGAGCACAACAGATACCTGTTTCACAAATCATTGCCACCCAATCAGGGCAAGGACAtgaaGCACTGGTTGCCCATAGCCAGCACAGCCAGGAGCTGTCGCAGCAGAGCTCTGGAAGCTCCCAGATTTCAGTCACCAGCCAAGCTAACCACCAGCAGGTACCCAATAACCGGGTGGAATTTGTACAACACCATAACATTGATATGGGTCATCACTCAACTCAACAACATATTCTACAACAGCAGCTAATGACAGCACGCCCTGACCATAATAATCAACAGATCCAACTAACGGTGAGTGAAGATGGCATTGTGACTGTCGTCGAGCCAGGGAACAGTAAGATGGTAGACAAGGAAGAACTACACGAGACCATCAAACTACCTTCTGATCACCCCTTGACGATCCACCAATTGCAACAAATTGTTGGCCAACAGCTTGGCTCACAAGTATTAGAAAACGTAGTCCGCATAGAGCAAGCGACGGGAGAGCCAGCCAACATTCTCGTCACCCATAACGCTGACGGGACGACCTCCATCGAAGCGAGCGCGTCAGACCCACTGGCTATCGTCAAGGATGAGAAGACGCAAGGCAAGATGGAAACTGCACAGTTCGCGATACCTGCAGAGATTAAAGATATTAAAGGCATTGACTTAAAGAGTGTCGGAGCAATGGGAATGGAGGGTGCCGTTGTGAAAATATCCACCGGAGCTGACCATGACATGACAGCCATGTACAAAGTGAACGTGGAAGACCTGTCGCAGCTGCTGGCGTATCACGAAGTCTTCGGGAAACTCAACACTGATGGCCAGgcacaaaataaaGGTGAATTGGAGATAGAAGTGCCTGGTTCGAGCCAGATGTCTGAAGCTGAATCATCGCCCGGACACCACGCCTGCGATATTTGCGGGAAGGTGTTTCAGTTCCGATATCAACTCATTGTACACAGgaGGTACCACGGTGAAAGCAAGCCCTACAGTTGCCAAGTCTGCGGCTCGTCTTTTGCCAATCCCGTCGAATTATCACGCCATGGAAAATGCCATCTTGcCGGGGATCCAGTGGAGAGGCACGCCAAGCGGATAGCCCAAGACAAACCCTACGCCTGCTCGACTTGCCATAAAACGTTTTCGCGGAAAGAACACCTCGACAACCACGTCAGGAGTCACACTGGGGAGACCCCATACAGATGCGAGTTCTGTGCGAAAACGTTTACTCGCAAAGAACACATGGTGAACCACGTGAGGAAACATACGGGCGAGACGCCGCACCGCTGTGATATCTGCAAGAAAAGCTTCACGAGGAAGGAGCATTTCATGAACCACGTCATGTGGCATACAGGTGAAACGCCCCACCGTTGCGACTTTTGTTCGAAGACGTTCACCCGCAAAGAGCACCTCCTGAACCATGTGAGACAGCATACGGGAGAATCTCCTCACCGATGCAACTACTGTTCGAAATCGTTCACGAGACGCGAACACCTTGTGAACCATGTTCGGCAGCATACGGGAGAGACACCGTTCCAGTGCGGGTATTGCCCCAAGGCGTTCACTCGGAAGGATCATCTCGTGAATCACGTGCGTCAACACACGGGAGAGTCCCCCCACAAGTGTTCGTTCTGCACCAAGTCGTTCACTCGGAAGGAGCACCTGACGAACCACGTCCGGCAGCACACGGGCGAGTCCCCGCACCGCTGCACATACTGCGCCAAGTCCTTCACCAGGAAAGAACATCTCACCAACCACGTCCGACAGCACACCGGCGAAACGCCGCACAAGTGCACGTATTGCCCGCGCGCGTTTTCGCGCAAAGAGCATCTCAACAACCACGTGAGGCAGCACACGGGCATCACTCCCCACGCCTGCTCCTATTGCAACAAGAGCTTCACCAGGAAGGAGCATCTTGTCAACCATGTCAGGCAACACACGGGCGAAACTCCGTTCAAGTGCACGTTCTGTTCGAAGtcgttctctcgcaaggagcacCTCACGAACCACGTGAACCTCCACACGGGCGAGACGCCGCACAAGTGTCCGTTCTGCACTAAGAGCTACTCCAGGAAAGAGCATCTCACTAACCACGTCAGGATCCACACGGGCGAATCGCCTCACCGGTGCGATTTCTGCCAGAAGACGTTTACCCGCAAGGAACACCTCTCGAATCACCTCAAACAGCACACCGGCGACGCGGCGTACACGTGCAAGATTTGTTCCAAGACTTTCACGAGAAAGGAGCAGTTGATTACACATATGAGGTCGCACACTTGCGGCGAGAAGCCGTACAGCTGCGAAGAGTGCGGCAAGTCGTTCCCACTGAAGGGGAACCTGATGTTCCACGAGCGGTCACACCACAAGGGCGGCGGGCCGCGCCCCCTTCCGCTGCGACGTCTGCTCGAAGGACTTCATGTGCAAAGGGCACTTGATATCGCACCGGCGCACGCACGCGGACGCGAGCGCGGCGCCGGCCGCGGAGACGctggccgcgcgcgcgcccgccggcGACGACTGCACGCCCAAGTGCGTCAAGCTCGAGACGGACCCCATCGAAAGCAAACCCAAaaTTGA
Protein Sequence: MNTEHHNINPGGGQPPGSSESQGQRVQATQQQQQGSLPATTSATDLRVNTAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIENGKPVQDIGQHASILNGDPNIILGHHSGQSQVTVSAGAQQIPVSQIIATQSGQGHEALVAHSQHSQELSQQSSGSSQISVTSQANHQQVPNNRVEFVQHHNIDMGHHSTQQHILQQQLMTARPDHNNQQIQLTVSEDGIVTVVEPGNSKMVDKEELHETIKLPSDHPLTIHQLQQIVGQQLGSQVLENVVRIEQATGEPANILVTHNADGTTSIEASASDPLAIVKDEKTQGKMETAQFAIPAEIKDIKGIDLKSVGAMGMEGAVVKISTGADHDMTAMYKVNVEDLSQLLAYHEVFGKLNTDGQAQNKGELEIEVPGSSQMSEAESSPGHHACDICGKVFQFRYQLIVHRRYHGESKPYSCQVCGSSFANPVELSRHGKCHLAGDPVERHAKRIAQDKPYACSTCHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFSRKEHLNNHVRQHTGITPHACSYCNKSFTRKEHLVNHVRQHTGETPFKCTFCSKSFSRKEHLTNHVNLHTGETPHKCPFCTKSYSRKEHLTNHVRIHTGESPHRCDFCQKTFTRKEHLSNHLKQHTGDAAYTCKICSKTFTRKEQLITHMRSHTCGEKPYSCEECGKSFPLKGNLMFHERSHHKGGGPRPLPLRRLLEGLHVQRALDIAPAHARGRERGAGRGDAGRARARRRRLHAQVRQARDGPHRKQTQN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00250683;
90% Identity: iTF_00635594; iTF_00034004; iTF_00033114;
80% Identity: iTF_00635594;