Basic Information

Insect: Cabera pusaria
Gene Symbol: -
Assembly: GCA_954871355.1
Location: OX940890.1:8933278-8971806[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.6e-05 0.0038 19.0 2.2 1 23 415 437 415 437 0.97

2 18 0.0053 0.76 11.8 0.7 1 20 443 462 443 465 0.94

3 18 2e-05 0.0029 19.4 5.6 1 23 484 506 484 506 0.98

4 18 9.3e-05 0.013 17.3 4.1 1 23 512 534 512 534 0.99

5 18 3.5e-05 0.0051 18.6 5.3 1 23 540 562 540 562 0.97

6 18 9.7e-05 0.014 17.2 6.7 1 23 568 590 568 590 0.97

7 18 9.6e-05 0.014 17.2 6.5 1 23 596 618 596 618 0.97

8 18 4.6e-07 6.7e-05 24.5 1.9 1 23 624 646 624 646 0.98

9 18 4.7e-05 0.0068 18.2 7.9 1 23 652 674 652 674 0.98

10 18 1.1e-05 0.0015 20.2 7.6 1 23 680 702 680 702 0.98

11 18 4.2e-06 0.0006 21.5 6.0 1 23 708 730 708 730 0.98

12 18 7.9e-06 0.0011 20.6 5.0 1 23 736 758 736 758 0.96

13 18 1e-05 0.0015 20.3 5.2 1 23 764 786 764 786 0.98

14 18 2.9e-06 0.00042 22.0 6.0 1 23 792 814 792 814 0.98

15 18 5.6e-05 0.0082 18.0 7.9 1 23 820 842 820 842 0.97

16 18 3.6e-06 0.00052 21.7 5.1 1 23 848 870 848 870 0.97

17 18 0.00072 0.1 14.5 0.3 1 23 877 899 877 899 0.97

18 18 0.0099 1.4 10.9 5.1 1 23 909 931 909 931 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.6e-05	0.0038	19.0	2.2	1	23	415	437	415	437	0.97
2	18	0.0053	0.76	11.8	0.7	1	20	443	462	443	465	0.94
3	18	2e-05	0.0029	19.4	5.6	1	23	484	506	484	506	0.98
4	18	9.3e-05	0.013	17.3	4.1	1	23	512	534	512	534	0.99
5	18	3.5e-05	0.0051	18.6	5.3	1	23	540	562	540	562	0.97
6	18	9.7e-05	0.014	17.2	6.7	1	23	568	590	568	590	0.97
7	18	9.6e-05	0.014	17.2	6.5	1	23	596	618	596	618	0.97
8	18	4.6e-07	6.7e-05	24.5	1.9	1	23	624	646	624	646	0.98
9	18	4.7e-05	0.0068	18.2	7.9	1	23	652	674	652	674	0.98
10	18	1.1e-05	0.0015	20.2	7.6	1	23	680	702	680	702	0.98
11	18	4.2e-06	0.0006	21.5	6.0	1	23	708	730	708	730	0.98
12	18	7.9e-06	0.0011	20.6	5.0	1	23	736	758	736	758	0.96
13	18	1e-05	0.0015	20.3	5.2	1	23	764	786	764	786	0.98
14	18	2.9e-06	0.00042	22.0	6.0	1	23	792	814	792	814	0.98
15	18	5.6e-05	0.0082	18.0	7.9	1	23	820	842	820	842	0.97
16	18	3.6e-06	0.00052	21.7	5.1	1	23	848	870	848	870	0.97
17	18	0.00072	0.1	14.5	0.3	1	23	877	899	877	899	0.97
18	18	0.0099	1.4	10.9	5.1	1	23	909	931	909	931	0.99

Sequence Information

Coding Sequence: ATGAATCCGGAACACCACAATATGAACACGGGTGGTGGTCAGCCTCCTGGGAATTCAGAGTCTCAGGGTCAAAGAGTGCAGGCTGCTCAACAACAGCAGCAAGGTAGCTTGCCCGCGACAACATCTGCCACGGATTTGAGAGTGAATACAGCAGCTGTAAACGTCGCTTTGTCAAGTGTTGCGAAGTATTGGGTGTTCACGAACTTATTTCCTGGACCAATCCCACAAGTGTCAGTTTATGGATTACCTACTGGTACCAGAATTGAAAATGGAAAACCTGTCCAGGATATTGGTCAACATGCGAGCATACTGAATGGTGATCCAAACATTATTCTTGGCCATCATGGAGGACAAACACAGGTGTCTGTGTCTGGGGCACAACAAATACCCGTCTCACAGATTATTGCCTCACAATCAGGACAAACACATGaaGCACTGGTGGCTCATAGCCAGCAGCAGGAGTTGCAGCAGGCAACAGCAGCCCAGATTTCAGTCTCTGCACAAAATCATCAGCAGGTACCCAATAGTCGGGTCGAATTTGTACAACACCATAACATTGATATGGGACATCATTCACAACAACATATTCTTCAGCAACAGCTAATGACGGCGCGTCCAGAACACACAAACCAACAGATTCAACTGACAGTTAGTGAAGATGGCATCGTCACGGTCGTGGAGCCCGGCAGCAGTAAGATGGTCGATAAGGAAGATCTTCATGAAACCATCAAGTTACCTTCGGACCACACCTTAACGGTTCACCAATTGCAACAGATTGTTGGACAACAGCTCGGCACTCAAGTACTAGAAAACGTAGTCCGCATAGAACAAGCAACGGGCGAACCAGCGAACATTCTAGTAACCCACAACGCTGACGGAACCACGTCGATAGAAGCGAGTGCCTCGGATCCTCTAGCCATCGTGAAGGATGAGAAAATTCAAGGAAAACTAGAATCGACGCAGTTTGCTATACCTGCTGAAATTAAAGATATTAAGGGCATTGATTTAAAGAGTGTCGGAGCAATGGGTATGGAAGGAGCAGTGGTCAAGATATCAACGGGAGCCGACCACGACATGACTGCCATGTACAAAGTCAACGTTGAAGATCTGTCACAACTACTAGCCTACCATGAGGTGTTCGGGAAACTCAACGCAGATGGACAGACGCAAAATAAGAACGATATTGAAATCGAAGTGCCGGGTACGAGTCAGATGTCAGATGCGGACTCTTCTCCCGGACACCATTCCTGTGATATTTGTGGAAAAGTATTCCAATTCCGATATCAACTTATTGTGCAcagACGGTACCACAGCGAGAGTAAACCCTACTCTTGTGAAGTTTGCGGCTCCTCCTTCGGCAACCCTGTAGAATTGTCGCGACATGGGAAATGCCACCTTGCCGGAGATCCAGCTGAGAGACACGCTAAGAGAATAGCCCAGGACAAACCTTACGCTTGCACTACTTGTCACAAGACGTTTTCGCGTAAAGAACATCTCGACAATCACGTACGGAGTCACACGGGAGAAACGCCCTATAGATGCGAGTTCTGCGCCAAAACGTTCACTCGCAAGGAGCATATGGTAAACCACGTCAGAAAACACACGGGCGAGACTCCACACCGATGCGACATCTGCAAAAAGAGCTTCACCAGAAAGGAACACTTTATGAACCACGTCATGTGGCATACGGGCGAAACGCCTCATCGCTGCGACTTTTGCTCCAAAACGTTTACTCGTAAGGAGCACCTACTAAACCACGTCAGACAACACACGGGCGAGTCTCCTCACCGATGCAACTTCTGCTCGAAGTCATTCACGAGACGAGAACATCTAGTTAACCACGTGAGACAACATACCGGGGAAACGCCGTTCCAGTGTGGATACTGCCCTAAAGCTTTCACTAGAAAGGATCATTTAGTGAATCacgtccggcagcacacaggtgAATCTCCGCACAAATGTTCATTCTGCACGAAATCCTTCACACGCAAGGAACATTTGACCAATCACGTGAGACAACACACGGGAGAATCACCGCATCGCTGCACTTATTGCTCCAAGTCATTCACCAGGAAGGAACATCTCACCAATCATGTCAGACAGCACACCGGTGAAACCCCGCACAAGTGCACGTTTTGCCCGCGCGCGTTCTCGCGCAAAGAACACCTCAACAACCACATGAGACAACACACGGGTATCACGCCGCACGCCTGCTCTTATTGCAACAAGAGCTTCACGAGGAAGGAGCATCTCGTCAATCATGTTCGGCAACACACTGGCGAAACTCCGTTCAAGTGCACGTTCTGTTCGAAGTCGTTTTCACGGAAGGAGCACCTGACCAACCACGTGAACCTCCACACTGGGGAAACGCCTCACAAATGTCCATTCTGCACTAAGACATTCTCCAGGAAAGAGCATCTCACTAATCATGTCAGAATCCACACGGGTGAATCACCCCACCGCTGTGATTTCTGCCAGAAGACATTCACTCGCAAGGAACACCTGACCAATCACCTGAAGCAGCACACGGGAGACACGGCGCATTCCTGCAAAGTTTGCTCGAAGGCGTTCACTAGGAAAGAACATCTTGTTACACATATGAGATCGCACAGTTGTGGCGAGCGACCGTATAGCTGTGGATGGTGCGGCAAGTCGTTCCCGTTGAAAGGCAACCTGATGTTCCACGAGAGATCTCATCAGAAGTCCAGCGCCGGCGCCCGACCCTTCCGCTGCGATGTCTGCTCTAAAGACTTCATGTGCAAAGGTCACTTAATATCACACCAACGTACACACGCGAATACGGACTCGGCGCCGACCGCTGAGGCGAAGACCGATGGCGTCGAGGAATGCTCCGCCAAGTGTGTCAAGATCGAGATCGACCCGCTAGCCTTGGAGAATAAACAACCTAAGATAGAGGAAGTGCACACTACGGAAACTATCATCGCTCCGCAAGTGTCTCCTGGAAACCCTACTGTGATGCAGATAAATAATCAAGAAGTACGAGCATCAACATCAAACGCTACCGGTATAACGACCGCAACATTCACCCACAGCGTCACAGGCCAACAGCACCTCCCCGGCGCGACGCTTGCCCACCATCCCGTCAGTGTAACCTACTAG
Protein Sequence: MNPEHHNMNTGGGQPPGNSESQGQRVQAAQQQQQGSLPATTSATDLRVNTAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIENGKPVQDIGQHASILNGDPNIILGHHGGQTQVSVSGAQQIPVSQIIASQSGQTHEALVAHSQQQELQQATAAQISVSAQNHQQVPNSRVEFVQHHNIDMGHHSQQHILQQQLMTARPEHTNQQIQLTVSEDGIVTVVEPGSSKMVDKEDLHETIKLPSDHTLTVHQLQQIVGQQLGTQVLENVVRIEQATGEPANILVTHNADGTTSIEASASDPLAIVKDEKIQGKLESTQFAIPAEIKDIKGIDLKSVGAMGMEGAVVKISTGADHDMTAMYKVNVEDLSQLLAYHEVFGKLNADGQTQNKNDIEIEVPGTSQMSDADSSPGHHSCDICGKVFQFRYQLIVHRRYHSESKPYSCEVCGSSFGNPVELSRHGKCHLAGDPAERHAKRIAQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCSKSFTRKEHLTNHVRQHTGETPHKCTFCPRAFSRKEHLNNHMRQHTGITPHACSYCNKSFTRKEHLVNHVRQHTGETPFKCTFCSKSFSRKEHLTNHVNLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCDFCQKTFTRKEHLTNHLKQHTGDTAHSCKVCSKAFTRKEHLVTHMRSHSCGERPYSCGWCGKSFPLKGNLMFHERSHQKSSAGARPFRCDVCSKDFMCKGHLISHQRTHANTDSAPTAEAKTDGVEECSAKCVKIEIDPLALENKQPKIEEVHTTETIIAPQVSPGNPTVMQINNQEVRASTSNATGITTATFTHSVTGQQHLPGATLAHHPVSVTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00635599; iTF_00635594; iTF_01208512;
90% Identity: iTF_01208512;
80% Identity: -