Egri006838.1
Basic Information
- Insect
- Ectropis grisescens
- Gene Symbol
- -
- Assembly
- GCA_017562165.1
- Location
- chr17:17611868-17654079[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.87 1.1e+03 -0.2 0.1 19 26 423 430 418 433 0.87 2 15 0.015 18 5.4 1.8 9 30 483 504 475 513 0.71 3 15 0.0055 6.7 6.8 1.7 6 37 508 539 505 540 0.74 4 15 0.025 31 4.7 2.9 5 33 535 559 533 569 0.81 5 15 0.033 40 4.4 2.2 15 33 572 591 559 597 0.72 6 15 0.0093 11 6.1 4.7 5 38 591 624 587 625 0.78 7 15 0.00098 1.2 9.2 0.7 5 38 619 652 617 658 0.85 8 15 0.052 63 3.7 5.3 6 38 648 680 643 686 0.82 9 15 0.022 27 4.9 4.9 17 38 686 708 676 714 0.84 10 15 0.035 43 4.3 2.4 6 30 704 728 703 742 0.74 11 15 0.039 48 4.1 3.8 18 38 743 764 731 765 0.81 12 15 0.0038 4.6 7.4 1.7 5 33 759 787 757 792 0.81 13 15 0.013 16 5.7 2.1 14 33 795 815 787 820 0.75 14 15 0.00098 1.2 9.2 3.6 6 38 816 848 815 849 0.84 15 15 0.00021 0.25 11.4 0.7 17 38 854 876 850 877 0.79
Sequence Information
- Coding Sequence
- ATGAACACGGAGCACCATAATATCAACCCGGGTGGTGGTCAACCTCCTGGGAGTTCAGAGTCTCAAGGACAAAGAGTGCAGGCTACACAACAGCAGCAACAAGGAAGTTTACCTGCCACGACGTCAGCCACGGATTTGCGAGTAAATACAGCAGCTGTAAATGTTGCTTTGTCCAGTGTAGCAAAGTATTGGGTATTTACGAACTTATTCCCTGGACCAATTCCGCAAGTCTCAGTTTATGGATTGCCTACCGGAACTAGAATTGAAAATGGAAAGCCTGTACAGGACATTGGCCAACATGCAAGCATACTTAATGGTGATCCAAACATCATATTGGGGCATCACAGTGGACAGTCACAAGTCACTGTGTCAGCGGGAGCACAACAGATACCTGTTTCACAAATCATTGCCACCCAATCAGGGCAAGGACAtgaaGCACTGGTTGCCCATAGCCAGCACAGCCAGGAGCTGTCGCAGCAGAGCTCTGGAAGCTCCCAGATTTCAGTCACCAGCCAAGCTAACCACCAGCAGGTACCCAATAACCGGGTGGAATTTGTACAACACCATAACATTGATATGGGTCATCACTCAACTCAACAACATATTCTACAACAGCAGCTAATGACAGCACGCCCTGACCATAATAATCAACAGATCCAACTAACGGTGAGTGAAGATGGCATTGTGACTGTCGTCGAGCCAGGGAACAGTAAGATGGTAGACAAGGAAGAACTACACGAGACCATCAAACTACCTTCTGATCACCCCTTGACGATCCACCAATTGCAACAAATTGTTGGCCAACAGCTTGGCTCACAAGTATTAGAAAACGTAGTCCGCATAGAGCAAGCGACGGGAGAGCCAGCCAACATTCTCGTCACCCATAACGCTGACGGGACGACCTCCATCGAAGCGAGCGCGTCAGACCCACTGGCTATCGTCAAGGATGAGAAGACGCAAGGCAAGATGGAAACTGCACAGTTCGCGATACCTGCAGAGATTAAAGATATTAAAGGCATTGACTTAAAGAGTGTCGGAGCAATGGGAATGGAGGGTGCCGTTGTGAAAATATCCACCGGAGCTGACCATGACATGACAGCCATGTACAAAGTGAACGTGGAAGACCTGTCGCAGCTGCTGGCGTATCACGAAGTCTTCGGGAAACTCAACACTGATGGCCAGgcacaaaataaaGGTGAATTGGAGATAGAAGTGCCTGGTTCGAGCCAGATGTCTGAAGCTGAATCATCGCCCGGACACCACGCCTGCGATATTTGCGGGAAGGTGTTTCAGTTCCGATATCAACTCATTGTACACAGgaGGTACCACGGTGAAAGCAAGCCCTACAGTTGCCAAGTCTGCGGCTCGTCTTTTGCCAATCCCGTCGAATTATCACGCCATGGAAAATGCCATCTTGcCGGGGATCCAGTGGAGAGGCACGCCAAGCGGATAGCCCAAGACAAACCCTACGCCTGCTCGACTTGCCATAAAACGTTTTCGCGGAAAGAACACCTCGACAACCACGTCAGGAGTCACACTGGGGAGACCCCATACAGATGCGAGTTCTGTGCGAAAACGTTTACTCGCAAAGAACACATGGTGAACCACGTGAGGAAACATACGGGCGAGACGCCGCACCGCTGTGATATCTGCAAGAAAAGCTTCACGAGGAAGGAGCATTTCATGAACCACGTCATGTGGCATACAGGTGAAACGCCCCACCGTTGCGACTTTTGTTCGAAGACGTTCACCCGCAAAGAGCACCTCCTGAACCATGTGAGACAGCATACGGGAGAATCTCCTCACCGATGCAACTACTGTTCGAAATCGTTCACGAGACGCGAACACCTTGTGAACCATGTTCGGCAGCATACGGGAGAGACACCGTTCCAGTGCGGGTATTGCCCCAAGGCGTTCACTCGGAAGGATCATCTCGTGAATCACGTGCGTCAACACACGGGAGAGTCCCCCCACAAGTGTTCGTTCTGCACCAAGTCGTTCACTCGGAAGGAGCACCTGACGAACCACGTCCGGCAGCACACGGGCGAGTCCCCGCACCGCTGCACATACTGCGCCAAGTCCTTCACCAGGAAAGAACATCTCACCAACCACGTCCGACAGCACACCGGCGAAACGCCGCACAAGTGCACGTATTGCCCGCGCGCGTTTTCGCGCAAAGAGCATCTCAACAACCACGTGAGGCAGCACACGGGCATCACTCCCCACGCCTGCTCCTATTGCAACAAGAGCTTCACCAGGAAGGAGCATCTTGTCAACCATGTCAGGCAACACACGGGCGAAACTCCGTTCAAGTGCACGTTCTGTTCGAAGtcgttctctcgcaaggagcacCTCACGAACCACGTGAACCTCCACACGGGCGAGACGCCGCACAAGTGTCCGTTCTGCACTAAGAGCTACTCCAGGAAAGAGCATCTCACTAACCACGTCAGGATCCACACGGGCGAATCGCCTCACCGGTGCGATTTCTGCCAGAAGACGTTTACCCGCAAGGAACACCTCTCGAATCACCTCAAACAGCACACCGGCGACGCGGCGTACACGTGCAAGATTTGTTCCAAGACTTTCACGAGAAAGGAGCAGTTGATTACACATATGAGGTCGCACACTTGCGGCGAGAAGCCGTACAGCTGCGAAGAGTGCGGCAAGTCGTTCCCACTGAAGGGGAACCTGATGTTCCACGAGCGGTCACACCACAAGGGCGGCGGGCCGCGCCCCCTTCCGCTGCGACGTCTGCTCGAAGGACTTCATGTGCAAAGGGCACTTGATATCGCACCGGCGCACGCACGCGGACGCGAGCGCGGCGCCGGCCGCGGAGACGctggccgcgcgcgcgcccgccggcGACGACTGCACGCCCAAGTGCGTCAAGCTCGAGACGGACCCCATCGAAAGCAAACCCAAaaTTGA
- Protein Sequence
- MNTEHHNINPGGGQPPGSSESQGQRVQATQQQQQGSLPATTSATDLRVNTAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIENGKPVQDIGQHASILNGDPNIILGHHSGQSQVTVSAGAQQIPVSQIIATQSGQGHEALVAHSQHSQELSQQSSGSSQISVTSQANHQQVPNNRVEFVQHHNIDMGHHSTQQHILQQQLMTARPDHNNQQIQLTVSEDGIVTVVEPGNSKMVDKEELHETIKLPSDHPLTIHQLQQIVGQQLGSQVLENVVRIEQATGEPANILVTHNADGTTSIEASASDPLAIVKDEKTQGKMETAQFAIPAEIKDIKGIDLKSVGAMGMEGAVVKISTGADHDMTAMYKVNVEDLSQLLAYHEVFGKLNTDGQAQNKGELEIEVPGSSQMSEAESSPGHHACDICGKVFQFRYQLIVHRRYHGESKPYSCQVCGSSFANPVELSRHGKCHLAGDPVERHAKRIAQDKPYACSTCHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFSRKEHLNNHVRQHTGITPHACSYCNKSFTRKEHLVNHVRQHTGETPFKCTFCSKSFSRKEHLTNHVNLHTGETPHKCPFCTKSYSRKEHLTNHVRIHTGESPHRCDFCQKTFTRKEHLSNHLKQHTGDAAYTCKICSKTFTRKEQLITHMRSHTCGEKPYSCEECGKSFPLKGNLMFHERSHHKGGGPRPLPLRRLLEGLHVQRALDIAPAHARGRERGAGRGDAGRARARRRRLHAQVRQARDGPHRKQTQN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00250683;
- 90% Identity
- iTF_00635599;
- 80% Identity
- iTF_00635599;