Basic Information

Gene Symbol
hang
Assembly
GCA_949715965.1
Location
OX454323.1:10425217-10433638[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 0.0017 0.32 12.9 0.9 3 23 261 282 260 282 0.95
2 22 0.015 2.8 9.9 2.4 2 22 347 367 346 367 0.93
3 22 2.3 4.4e+02 3.0 1.1 3 21 377 395 376 396 0.94
4 22 0.04 7.8 8.5 0.2 1 22 435 456 435 458 0.90
5 22 7.3 1.4e+03 1.4 0.0 3 21 471 489 470 490 0.91
6 22 0.0047 0.91 11.4 1.1 2 23 569 591 568 591 0.93
7 22 7e-05 0.013 17.2 0.2 1 23 599 622 599 622 0.96
8 22 0.07 14 7.7 1.7 3 23 636 656 634 657 0.93
9 22 0.072 14 7.7 3.3 1 23 660 682 660 682 0.97
10 22 0.0014 0.26 13.1 1.1 2 23 743 764 742 764 0.97
11 22 0.00011 0.021 16.6 4.3 2 23 811 833 810 834 0.95
12 22 0.0017 0.33 12.8 0.9 2 23 842 864 841 864 0.95
13 22 0.0011 0.2 13.5 0.1 1 23 877 900 877 900 0.93
14 22 0.00073 0.14 14.0 0.8 1 23 925 947 925 947 0.98
15 22 0.0014 0.27 13.1 0.9 1 23 955 978 955 978 0.96
16 22 6.8e-05 0.013 17.2 0.8 2 23 986 1007 985 1007 0.97
17 22 7.4e-05 0.014 17.1 0.6 2 23 1055 1076 1054 1076 0.97
18 22 3e-05 0.0058 18.4 0.1 1 23 1111 1133 1111 1133 0.97
19 22 3e-05 0.0058 18.3 1.8 1 23 1161 1184 1161 1184 0.91
20 22 0.23 44 6.1 0.4 2 23 1204 1225 1203 1225 0.93
21 22 0.00078 0.15 13.9 0.3 3 23 1239 1259 1239 1259 0.99
22 22 0.00078 0.15 13.9 1.3 1 23 1412 1434 1412 1434 0.97

Sequence Information

Coding Sequence
ATGACGGATGAACTGATCGTACGTGCGCGACAAAATTGCTGTCGCCTGTGCCTGGCTCCGGACAGTGAGTGTGTTCCCATTTTCACCAGCTTCGCAGCGGATAAGGAGCCTCTTTCGTCGAAAATTCATGCTTGTGTCAACATCAAGGTTAGCGAATCGGATCGATTGTCTGCACGGATATGCCACTCGTGCATAAGCTACCTGAACTCATGGCAGAGTTTCAAGAACCGATGCATAGCGTCGCAGATAAAGCAAAGGAACTGGCTGCAAATGGCAAAGAAGACCGTCAAGAAGCAGTTCGATAGCATGAGGGTCAACCAAAATGGACCTATGAGTGCATCGATTCTGCCAGCCACGACAAACGGTCAATCTCAATCTCCACCATCTGCGCTCAAAAACAGGCCAATGCCACTGCCGATCAAGATTAAGGAAGAACCCGAAGATATTGAGGAGGATGTCCCTGAGCCTGACGATAAATTGGAGCAAGAGAGTGAAGATAACATGAAAGTCGATCTTGATCCTTCACAGTTTCTGtctaaagaagaagaagaacaggAAGATGATGACGCTGTATCGCATCTCAGAAAGGGACAGGGACCTCAAATTTTAACATCACTTGGGCTAACGCATATAAATAGTGTGAACCCGTTTTCGTTTTTGAGCACAGAACTTGGCCATGACAAATCGTCGGTGACAAGCGATTTAAACGATACAACTGAATCGAATGCCGGCCCTTCAGTTATAGAGCAAGATCTAAATGATCCCAACGCGCTTCCATCTTGTAGAATATGTAAAGTCTCCTTCTCAACCCGAGCGAATGCAAAGCGTCACGAGCGTAACATTCATGGTAAATCTCTGGATTCTTCTATACCAAAAGTTAGCATAAAATCGAATCCTTCGAAAACGGGTAAATTTCCTCCAGAGATGCTAGGGATTTTCGATTAtcataaacctgaaaaataTCGTCATTTGTTGACtgaccaaaaaatcatgtatatTCGTCGCAATGAGGAGTTTCTGAAACAGTATCAGAACTTAACATGTAAATGTTGTCCGAAAACGTTTCCCACATACAAAACTTTTATGGCTCACATGAGGAAGAAGTACCAGACGTTGGCTAGAAACCTGTGTTTTAAATGCCTAAAACAGTTCCAGACTAAACCAATGTTTGTATCTCACCTAAAGAAGAGAAACTGTTTGAATCTGTACAAGGTTTACATGAATGATGAAACTATTCCAAAGTCAGGACCTTATCCATTGACAGAAAAGGTAGGAGCGAAGGATTTGCTCATGAACAAAGTGTATGAGTGCAAAATCTGCTCCAAAGGCTTAAGACTGAAAGTAGAATTCAGGGCGCATGTTTATGATGAACATGCTGAATTGATGAAGAAGGATGTCCCGCCTGGATCGTGTGGATTTTGTGGTCTCGAGGTTGAAGACCCTGTGGAGCGAAAGCGACACTACAATAACATGGAATGCATAGTGTTCTTAAAGTGTATCACATGTGAGGAGAAATTCGATTGTCACCAGAAGTTTATAGAGCATGTTTATGCAGAACATGTTATACAGAATAATAATGAAGAGGCCGATCAAAGCAGCATCATTGAATCTATTCCAGAGAGCAGAGAGGAACTTAAGGAACCTAAGGAACCTATTGCTCCGAAAGCATCTGATGGTAAATCAAGCGACCTGCGGCTTCCGCAAAGTTGCCAGATATGTGGTCAGCATTACAATAACTACAATAACGTACTTAGGCATATGGAAGCAAAACACCCTGACCAGTTACCGACAACCTACAAATGTACAAAATGTGATGTCGGCTATCCACGTCTTTCAATGCTCCGTAATCACATGTTGGAAGTACATCAGAGTAAACTTCCTAAAGTGAGGAGAGAGGGAATTTTCTGTCGCATGTGCTCAGAAACTTTTGAGACTCGCGATAAGTGGATTTCACACCAATCTGATCACCATTCACGCTATACTTGTTGTCAGTGCAATTACCAGAGTAAGAACTTGGAAGAGTTCAAGAATCATATTGAATTGCATCCGACATTAGCTTCAAAATCTTCAAGTACAACATCCAACCGATACGACTATATCATGAAGGATTTGCTTACCATAGTGAACGGTTGCCAGGAGCTTAATGAAGAAAGGGAGAGTGAGGATAAGCACCTGAAAAAGGAGACACCACCGGCGAAAAAGATTAAGCTGGAATCAGATTTTAAAGAATGCCAAATTTGTCACAGTGTTTTCACAAGTAATTTGGGGTTGTCGAATCATATGAGGGCGCACAATGCTCAGGATCAAGGTAAAAAATCTGGCCTATCCGGTGCGAAGATAATAACAACAGATATATCGCTGAAACATGAAAACGGACAAAAAGACGATGTGAAGAAGGAAGGAGAACCAGATGCCAGATTTAGGCGGATGCGATGCCGAATATGTCAGAGACGGTTTTCTACTAAAAAAAGTTACCGACGACACATGCTTATTGATCACCACGTCAAAAACGTACCCTTCATCAAATGTAGTGTTTGCCAGGCTGAATTTACCCATGAGAAAGGTCTGAAGGTTCACATGTTCAAGGCACACGGAACTGTTCTGACTGATGAAGTTATAGAAATTCAATTTGAATGTGATGTTTGTTCCACGGTTTACAGGAATGAGGAGCAGTTGAATGCCCATAAAGTATCAGTTCATGGATCAGAGGATATTGATGAGCCCATGCAAGAAATTTCTCCACCCGTCCCCTCGAATACTCCAAAGTATTGGTTCCAGTGCCGCTATTGCCCATCTAACTTTGATACAAATAAAAAGCTTGCGATTCACATAAACTCCCATGAAGAATTCGATTCCAATGACTACTCCTGCAAAGACTGCGGGAATGTCTACAGTGGAAGGAAGAGCTTATGGGTGCATAGGTACAAAAAACATCCTCTTATTCCTGATCCTTCTCCATGTAACTTATGCAACAAAACTTTCTTCGACAAGAATATGCTGGAACTTCATATAAAATCTCATAAGCAAGAGAAGGTGCTAAATAGTGATGGTATAAGAACACTCTCAGTGAATCAAAACGATACCCAGAGTTTTGCTGATGACGAGGATGATGATATTGAAGATTCTGTAGAGGAAAAGATAATAACACCGCTGGCGCAGGTCAGTTGCACTATTTGCACCGAGAAGTTTAGCGATGAGGATCTCTTCAGTAAACATATGCAAATGCACGAAAGTGAACTTTATACGGATAATCCTCTAGCTGCGATGTTTGATACTGAACCGGAAGATCCTAATAGATTCTTCATGAGCAGAATGGGAGAAGACGGAGCCTTTGTATGTGATCTTTGCCCAAAGAGCTTCCCTAATCTCACCGCCCTTAAGGTGCATCGAAATTGGCACTTTAGGAGTGACAGTAAACAAGCGACTGCAGACCCCAACGCAGTTTGGCGCGGGAATCCTAAGAAGAAAAAAGTAGCCTCACACCGTTGTCAGTATTGCAATTCAACATTCGTCAGCAGTAGCAATTTGCGTCGTCACATCGGCGAATTGCACAAGCGTGAAATCGCTAATGGTGTAGAGCCGCCAGAAGTATTCATTGAAAAGCACTTAGAGTgtcaaaaatgtaatttgaaGTTCCAAACGAAGATTGAGTGGGTGGAACACAAACTTGAGCACGTAAGGAACGCTAAGCATGATACCACATTTGAATGGGGCTGCGAAATTTGTGGCAAATTGGTGTCACGTAAAGAGCGATTGATCCAACACATGAACTCTCATTTGAGACGTGAAGAGCAGCAAAATGGTCATGTGAGTGGCGGAGATCCACTTAACAGTGAAGCAGGTTTCGAAAGCAATTCCCAGGATTCAGAAGGTTCCTCCAATGGTCAGCAAGAGGCTGCAAATGAAGATATCGATAATGATAACGAGAATGAGAACGAGAACGAGGACGAGAACGAGGACGAGAACGAGAACGACAATGAAGATGAAGTTGAAAACAAGGATAATGATAATGAGAAAAATGATGCCCCTGAAAAAAATTTGCCTAAAGGAGATGATGAGAATCACGCAGATGATGATGGTGATGATGAGGCGGATGACGAAAGTGACATCAATTCGACTAGCTCGGACGATGACAACGACGATAatgatgacgatgatgatgatgattcgGACTCTGATAAGAGCTCCAGCCAAGAGGAGGATGCAGAATATGAAGACGACAACGAGGGGCCCTACTCGTGTGACCTCTGTCAACTGTATTTTGAATCATCGAAGCAGTTGCAACGACATGTGACTAGTCACTTCCTTAACGGACCCGGATCAGTTACATTAACTGAGCTATCCAAAGAAAAGCAAACGCCTACGGAGAATGGGGATCGAACGGATACCTCCTCATAG
Protein Sequence
MTDELIVRARQNCCRLCLAPDSECVPIFTSFAADKEPLSSKIHACVNIKVSESDRLSARICHSCISYLNSWQSFKNRCIASQIKQRNWLQMAKKTVKKQFDSMRVNQNGPMSASILPATTNGQSQSPPSALKNRPMPLPIKIKEEPEDIEEDVPEPDDKLEQESEDNMKVDLDPSQFLSKEEEEQEDDDAVSHLRKGQGPQILTSLGLTHINSVNPFSFLSTELGHDKSSVTSDLNDTTESNAGPSVIEQDLNDPNALPSCRICKVSFSTRANAKRHERNIHGKSLDSSIPKVSIKSNPSKTGKFPPEMLGIFDYHKPEKYRHLLTDQKIMYIRRNEEFLKQYQNLTCKCCPKTFPTYKTFMAHMRKKYQTLARNLCFKCLKQFQTKPMFVSHLKKRNCLNLYKVYMNDETIPKSGPYPLTEKVGAKDLLMNKVYECKICSKGLRLKVEFRAHVYDEHAELMKKDVPPGSCGFCGLEVEDPVERKRHYNNMECIVFLKCITCEEKFDCHQKFIEHVYAEHVIQNNNEEADQSSIIESIPESREELKEPKEPIAPKASDGKSSDLRLPQSCQICGQHYNNYNNVLRHMEAKHPDQLPTTYKCTKCDVGYPRLSMLRNHMLEVHQSKLPKVRREGIFCRMCSETFETRDKWISHQSDHHSRYTCCQCNYQSKNLEEFKNHIELHPTLASKSSSTTSNRYDYIMKDLLTIVNGCQELNEERESEDKHLKKETPPAKKIKLESDFKECQICHSVFTSNLGLSNHMRAHNAQDQGKKSGLSGAKIITTDISLKHENGQKDDVKKEGEPDARFRRMRCRICQRRFSTKKSYRRHMLIDHHVKNVPFIKCSVCQAEFTHEKGLKVHMFKAHGTVLTDEVIEIQFECDVCSTVYRNEEQLNAHKVSVHGSEDIDEPMQEISPPVPSNTPKYWFQCRYCPSNFDTNKKLAIHINSHEEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPLIPDPSPCNLCNKTFFDKNMLELHIKSHKQEKVLNSDGIRTLSVNQNDTQSFADDEDDDIEDSVEEKIITPLAQVSCTICTEKFSDEDLFSKHMQMHESELYTDNPLAAMFDTEPEDPNRFFMSRMGEDGAFVCDLCPKSFPNLTALKVHRNWHFRSDSKQATADPNAVWRGNPKKKKVASHRCQYCNSTFVSSSNLRRHIGELHKREIANGVEPPEVFIEKHLECQKCNLKFQTKIEWVEHKLEHVRNAKHDTTFEWGCEICGKLVSRKERLIQHMNSHLRREEQQNGHVSGGDPLNSEAGFESNSQDSEGSSNGQQEAANEDIDNDNENENENEDENEDENENDNEDEVENKDNDNEKNDAPEKNLPKGDDENHADDDGDDEADDESDINSTSSDDDNDDNDDDDDDDSDSDKSSSQEEDAEYEDDNEGPYSCDLCQLYFESSKQLQRHVTSHFLNGPGSVTLTELSKEKQTPTENGDRTDTSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_01461339;
80% Identity
-