Mrus019846.1
Basic Information
- Insect
- Machimus rusticus
- Gene Symbol
- hang
- Assembly
- GCA_951509405.1
- Location
- OX608051.1:25941571-25962346[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.0016 0.29 12.9 0.9 3 23 259 280 258 280 0.95 2 22 0.014 2.5 9.9 2.4 2 22 345 365 344 365 0.93 3 22 2.1 3.9e+02 3.0 1.1 3 21 375 393 374 394 0.94 4 22 0.0086 1.6 10.5 0.4 1 22 433 454 433 456 0.90 5 22 6.9 1.3e+03 1.4 0.0 3 21 469 487 468 488 0.91 6 22 0.0044 0.83 11.5 1.1 2 23 567 589 566 589 0.93 7 22 6.5e-05 0.012 17.2 0.2 1 23 597 620 597 620 0.96 8 22 0.54 1e+02 4.9 1.1 3 23 634 654 632 655 0.93 9 22 2.3 4.3e+02 2.9 3.4 1 23 658 680 658 680 0.97 10 22 0.0013 0.24 13.1 1.1 2 23 741 762 740 762 0.97 11 22 0.0001 0.019 16.6 4.3 2 23 810 832 809 833 0.95 12 22 0.0016 0.3 12.8 0.9 2 23 841 863 840 863 0.95 13 22 0.00037 0.069 14.8 0.1 1 23 876 899 876 899 0.96 14 22 0.00069 0.13 14.0 0.8 1 23 924 946 924 946 0.98 15 22 0.0013 0.25 13.1 0.9 1 23 954 977 954 977 0.96 16 22 8.2e-05 0.015 16.9 0.9 2 23 985 1006 984 1006 0.97 17 22 4.8e-05 0.009 17.6 0.5 2 23 1054 1075 1053 1075 0.97 18 22 2.8e-05 0.0052 18.4 0.1 1 23 1110 1132 1110 1132 0.97 19 22 2.8e-05 0.0053 18.4 1.8 1 23 1160 1183 1160 1183 0.91 20 22 0.21 40 6.2 0.4 2 23 1203 1224 1202 1224 0.93 21 22 0.00073 0.14 13.9 0.3 3 23 1238 1258 1238 1258 0.99 22 22 0.00073 0.14 13.9 1.3 1 23 1396 1418 1396 1418 0.97
Sequence Information
- Coding Sequence
- ATGACGGATGAATTAATTGTACGCGCGCGACAGAATTGCTGTCGCCTATGCTTGGCTCCGGACAGTGAGTGCGTTCCCATTTTCACCAGCTTCGCTGCGGATAAGGAGCCCCTTTCgtcgaaaatttattcttgtGTCAATATCAAGGTTAGCGAATCGGATCGATTGTCTGCACGAATATGCCACTCATGCATAAGCTATCTAAACTCATGGCAGAGTTTCAAGAACCGATGTATAGCGTCACAGATGAAGCAGAGAAATTGGTTGCAAATGGCAAAGAAAACCGTCAAGAAACAATTCGATAGCATGACCATTAAGCAAAGTGGACCTACGAATGTATCGACTTCGTCAGCTACGATAAATGGCCAGTCTCAGTCCCCACCATCTGCACTCAAAAACAGGCCAATgCCACTACCAATCAAGATTAAGGAAGAACCCGAAGATATTGAAGAAGATGTTCCTGAACCTGGGGAAAAAGTGGAGCAAGATAGCGAAGATAACATGAAAGTCGATATTGATCCTTCAAAGTTTTTGGCTAAAGAAGAAGAACAGGATGATGACACCATATCGCACTTCAGAAAGGGACAAGGACCACAAATTTTAACATCACTTGGGTTAACGCATATCAATAGTGTAAACCCTTTCTCATTTTTGagCACAGAACTTGGTCATGAAAAATCGCTGGTCACAAGCGATTTAAACGATACAACTGAATCGAATGCCAGCCCTTCAGTCATAGAGCAGGACCTTAATGATCCCAACGCGCTCCCATCTTGTAGAATATGCAAAGTCTCCTTTTCCACGCGAGCCAATGCAAAGCGTCATGAGCGTAACATTCATGGAAAATCCTTGGATTTGTCTACACCAAAAGTTAGTTTAAAACCGAATTCTTCAAAAACGGGAAAGTTTCCTGCAGAGATGCTAGGCATTTTCGATTATCACAAACCTGAAAAATATCGTCATTTGTTGACTgaccaaaaaattatgtatatacgTCGTAACGAGGAATTTCTTAAGCAGTATCAGAATTTAACATGTAAATGTTGCCCGAAGACGTTTCCCACatacaaaacttttatggCGCACATGAGGAAGAAGTACCAGACATTAGCTAGAAACTTGTGTTTTAAGTGTTTAAAACAGTTCCAGACTAAACCAATGTTTGTGTCTCACCTAAAGAAGAGAAACTGCTTGAATCTATATAAGGTCTATATGAACGATGAAACTATTCCAAAATCTGGGCCTTATCCATTGACGGAAAAGGTTGGAGCGAAGGACTTGCTCATGAACAAAGTCTATGAGTGCAAAATATGCTCTAAAAGTTTAAGACTGAAGGTGGAATTCAGAGCACATGTTTATGACGAACATGCTGAATTGATGAAGAAGGACGTCCCGCCTGGGTCCTGTGGTTTTTGTGGTCTTGAGGTCGATGACCCTGTGGAGCGAAAGCGACATTACAATAACATGGAATGTATAGTATTCCTTAAGTGTATTACTTGTGAAGAGAAATTCGATTGCTACCAGAAGTTCATAGAGCATGTTTATGAAGAACATGTTATACAGACTAATAGTGAAGAGATTGATCAAAGTAGCATTATTGAGTCTATTCCAGAGCCCAAGGAGGAACTTAAAGAGCCTAAGGAACTTATTGCACCAAAAGTATCTGATGGTAAATCAAGCGACCTGCGGCTGCCGCAGAGCTGCCAGATATGTGGTCAGcattataataattacaataatgtaCTTAGGCATATGGAAGCAAAACACCCGGATCAGTTGCCGACAACCTACAAATGTACTAAATGCGATGTCGGCTATCCACGTCTTTCAATGCTCCGGAATCACATGTTGGAGGTGCATCAAAGTAAACTTCCTAAGGTGAGGCGAGAGGGAATTTTCTGTCGTATGTGTTCGGAAACTTTTGAGGTTCGTGAAAAATGGATCTCGCATCAATCTGATCATCATTCACGTTACACCTGTTGTCAGTGCAATTACCAGAACAAGAACTTGGAAGAGTTCAAGAATCACATTGAATTGCATCCGACATTAGCTTCGAAATCCACAAGTACAATTTCCAACCGTTATGATTATATAATGAAGGATTTGCTTACTATCGTGAATGGTTGCCAAGAGCTTAATGAGGAAAGAGAGAGCGAGGATAAGCTACTGAAAAAGGAGGCACCACCGGCAAAAAAGATTAAACTTGAATCAGATTTTAAAGAATGCCAGATTTGCCATAGTGTTTTTACAAGTAATTTGGGTTTGTCGAATCATATGAGGGCGCACAATGCTCAGGATCAAGCAAAAAAATCTGGTTTATCCGGCGCAAAGATAATAACAACAGACATATCCCCAAAACCAGAAGGCGGAGGACATAAGGATGAGGTGAAGAAGGAAGGAGAACCTGATGCGAGGTTTAGGCGGATGCGATGCCGTATATGCCAAAGACGGTTTTCCACTAAGAAGAGCTATCGACGACATATGCTGATTGATCACCACGTCAAAAACGTGCCATTCATTAAATGCAGTGTTTGCCAAGCCGAATTTACCCATGAGAAAGGTCTCAAGGTTCACATGTTCAAGGCACATGGAACTGTTCTGACTGATGAAGTTATAGAAGTTCAATTTGAGTGTGATGTTTGCTCCACGGTATATAGGAATGAGGAGCAGTTGAATGCCCATAAATTATCAGTTCACGGATCAGAGGATATTGATGAACCCATGGAAGAAACTCTTCCGTCCGTTCCATCAAATACTTCGAAGTATTGGTTTCAGTGTCGCTATTGCCCATCGAACTTTGATACTAATAAGAAGCTTGCAATTCACATAAACTCTCATGAAGAATTCGATTCCAACGATTACTCCTGCAAAGACTGCGGAAACGTCTATAGTGGAAGAAAGAGCTTGTGGGTCCATAGGTACAAAAAACATCCTCTTATTCCTGATCCCTCGCCATGCACGCTTTGCAACAAAACTTTCTTTGACAAGAATATGTTAGAACTTCACATTAAGTCTCATAAGCAAGGGAAGGCGCTTAATAATGAGGGTATAAGAGCATCCTTAGTTGCTCAAAATGATACCCACAGTTTTGCCGATGACGAGGACGATGAAAATGAAGATAATGTAGAAGAGAAGGTAGTAGCACCGTTGGCGCAGGTCAGTTGCACTGTTTGCAACGAGAAGTTTAGCGATGAGGATCTTTTCAGTAAACATATGCAAATGCACGAAAGTGAGCTTTACACGGATAATCCTCTAGCTGCGATGTTTGATACGGAACCGGAAGATCCTAACAGATTTTTCATGAGTCGAATGGGAGAAGATGGAGCCTTTGTGTGTGATCTCTGCCCAAAGAGCTTTCCTAATCTCACTGCCCTTAAGGTGCATCGGAATTGGCACTTTAGGAGTGATAGTAAACAAGCGACTGCCGATCCTAACGCAGTTTGGCGCGGAAATccaaagaagaagaaaatagcCTCACATCGTTGTCAGTATTGCAATTCAACATTTGTCAGCAGTAGCAATTTGCGTCGTCACATTGGCGAATTGCACAAACGCGAAATCGCTAATGGTGTAGAGCCCCCAGaagtatttattgaaaagcaTTTAGAATGccaaaaatgcaatttgaaaTTCCAAACAAAGATTGAGTGGGTAGAACATAAACTAGAGCATGTCAGGAATGCGAAGCATGATACCACATTTGAGTGGGGCTGCGAAATTTGCGGCAAATTGGTTTCACGTAAAGAGCGATTGATCCAACACATGAACTCACATTTGAGACGCGAAGAGCAGCAAAATGGACATATGAGTGGTGGAGATCCATTGAATAGTGAAGCAGGTTTCGAGAGTAATTCTCAGGATTCAGAAGGTTCCTCCAATGATCAAAGAGATGTTGCAAATGAGGATATCGACAATGACAACGAAAATGAGGATGAAGTTGAAAATAAGGATGATGAAAAAAATGATGTCCCTGAAGAAAATTTGCCTGAAGTTGGTGATAATCACGTGAATGATGACGGTGATGATGAAGCGGATGACGAAAGTGACATTAACTCAAGTAGCTCCGATGACGGCAATGATGATAATGAGGATAATGAAGATAATGATAATGATGATGGTTCGGACTCCGATAGAAGTTCCAGTCAGGAAGAGGACGCAGAATTCGAGGACGACAATGAGGGACCCTATTCATGTGACCTCTGTCAACTTTACTTTGAATCATCGAAGCAACTGCAGCGACACGTGACTAGTCACTTTCTTAACGGACCCGGATCAGTTATGTTAACTGAGCTACCCAAAGAAAAACGATCGCCTATGGAAAATGGCGATCGAACTGATACCTCCTCATAG
- Protein Sequence
- MTDELIVRARQNCCRLCLAPDSECVPIFTSFAADKEPLSSKIYSCVNIKVSESDRLSARICHSCISYLNSWQSFKNRCIASQMKQRNWLQMAKKTVKKQFDSMTIKQSGPTNVSTSSATINGQSQSPPSALKNRPMPLPIKIKEEPEDIEEDVPEPGEKVEQDSEDNMKVDIDPSKFLAKEEEQDDDTISHFRKGQGPQILTSLGLTHINSVNPFSFLSTELGHEKSLVTSDLNDTTESNASPSVIEQDLNDPNALPSCRICKVSFSTRANAKRHERNIHGKSLDLSTPKVSLKPNSSKTGKFPAEMLGIFDYHKPEKYRHLLTDQKIMYIRRNEEFLKQYQNLTCKCCPKTFPTYKTFMAHMRKKYQTLARNLCFKCLKQFQTKPMFVSHLKKRNCLNLYKVYMNDETIPKSGPYPLTEKVGAKDLLMNKVYECKICSKSLRLKVEFRAHVYDEHAELMKKDVPPGSCGFCGLEVDDPVERKRHYNNMECIVFLKCITCEEKFDCYQKFIEHVYEEHVIQTNSEEIDQSSIIESIPEPKEELKEPKELIAPKVSDGKSSDLRLPQSCQICGQHYNNYNNVLRHMEAKHPDQLPTTYKCTKCDVGYPRLSMLRNHMLEVHQSKLPKVRREGIFCRMCSETFEVREKWISHQSDHHSRYTCCQCNYQNKNLEEFKNHIELHPTLASKSTSTISNRYDYIMKDLLTIVNGCQELNEERESEDKLLKKEAPPAKKIKLESDFKECQICHSVFTSNLGLSNHMRAHNAQDQAKKSGLSGAKIITTDISPKPEGGGHKDEVKKEGEPDARFRRMRCRICQRRFSTKKSYRRHMLIDHHVKNVPFIKCSVCQAEFTHEKGLKVHMFKAHGTVLTDEVIEVQFECDVCSTVYRNEEQLNAHKLSVHGSEDIDEPMEETLPSVPSNTSKYWFQCRYCPSNFDTNKKLAIHINSHEEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPLIPDPSPCTLCNKTFFDKNMLELHIKSHKQGKALNNEGIRASLVAQNDTHSFADDEDDENEDNVEEKVVAPLAQVSCTVCNEKFSDEDLFSKHMQMHESELYTDNPLAAMFDTEPEDPNRFFMSRMGEDGAFVCDLCPKSFPNLTALKVHRNWHFRSDSKQATADPNAVWRGNPKKKKIASHRCQYCNSTFVSSSNLRRHIGELHKREIANGVEPPEVFIEKHLECQKCNLKFQTKIEWVEHKLEHVRNAKHDTTFEWGCEICGKLVSRKERLIQHMNSHLRREEQQNGHMSGGDPLNSEAGFESNSQDSEGSSNDQRDVANEDIDNDNENEDEVENKDDEKNDVPEENLPEVGDNHVNDDGDDEADDESDINSSSSDDGNDDNEDNEDNDNDDGSDSDRSSSQEEDAEFEDDNEGPYSCDLCQLYFESSKQLQRHVTSHFLNGPGSVMLTELPKEKRSPMENGDRTDTSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00628566;
- 90% Identity
- iTF_01461339;
- 80% Identity
- -