Pcoq004802.1
Basic Information
- Insect
- Proctacanthus coquilletti
- Gene Symbol
- hang_1
- Assembly
- GCA_001932985.1
- Location
- MNCL01000063.1:589175-595934[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.0014 0.18 12.9 0.9 3 23 257 278 256 278 0.95 2 22 0.022 2.8 9.1 0.1 6 22 345 361 345 361 0.97 3 22 0.86 1.1e+02 4.2 1.2 3 21 371 389 370 390 0.94 4 22 0.018 2.2 9.5 0.2 1 22 429 450 429 452 0.90 5 22 6.3 7.8e+02 1.4 0.0 3 21 465 483 464 484 0.91 6 22 0.0053 0.66 11.1 1.2 3 23 561 582 559 582 0.93 7 22 5.9e-05 0.0074 17.2 0.2 1 23 590 613 590 613 0.96 8 22 0.78 97 4.3 1.1 3 23 627 647 625 648 0.93 9 22 0.013 1.6 9.9 4.0 1 23 651 673 651 673 0.98 10 22 0.0012 0.15 13.2 1.1 2 23 734 755 733 755 0.97 11 22 9.4e-05 0.012 16.6 4.3 2 23 803 825 802 826 0.95 12 22 0.0018 0.23 12.5 2.2 2 23 834 856 833 856 0.95 13 22 0.0009 0.11 13.5 0.1 1 23 869 892 869 892 0.93 14 22 0.00063 0.078 14.0 0.8 1 23 918 940 918 940 0.98 15 22 0.0012 0.15 13.1 0.9 1 23 948 971 948 971 0.96 16 22 0.00019 0.023 15.7 0.8 2 23 979 1000 978 1000 0.97 17 22 0.00013 0.016 16.2 1.2 2 23 1043 1064 1042 1064 0.97 18 22 7.9e-05 0.0099 16.8 0.1 1 23 1099 1121 1099 1121 0.97 19 22 2.6e-05 0.0032 18.4 1.8 1 23 1149 1172 1149 1172 0.91 20 22 2.3 2.8e+02 2.8 0.2 2 23 1192 1213 1191 1213 0.87 21 22 0.00066 0.082 13.9 0.3 3 23 1227 1247 1227 1247 0.99 22 22 0.00032 0.04 14.9 1.4 1 23 1376 1398 1376 1398 0.97
Sequence Information
- Coding Sequence
- ATGACGGATGAGTTAATTGTACGCGCGCGACAAAATTGCTGTCGTCTATGTCTGGCCCCGGACAGCGAATGTGTTCCAATTTTCACCAGCTTCGCAGCCGATAAGGAGCctctttcttcaaaaattcacGCTTGTGTCAACATCAAGGTTAGCGAGTCGGATCGATTATCTGCACGGATATGCCACTCTTGCATAAGCTACCTGAACTCATGGCAGAGCTTCAAGAACCGATGCATAGCATCGCAGATAAAGCAAAGGAACTGGCTGGATATGGCTAAGAAATCTGCTAAGAAGAAGTTCGATTATATGAGGGTGAACCGAAGCGGTCCCCGAAGTATATCGACTCCTCCAGCCGTGACAAATGGTCAATCACCACCGTCTGTGCTGAAAAACAATAGACCAATGCCACTGCCCATCAAGATCAAAGAGGAGCCAGAGGACATCGAAGAGGATGTCCCAGACGAGAAAGTGGAACAAGACAGTGAGGATAACATGAAAGTCGACCTTGATCCTTCAGAGTTTTTAGCGAAAGAAGAAGATGAAGCGGACGATGATGAGGCTGATTCACATCTCAGAAAGGGACAGGGACCACAGATTTTAACATCACTTGGATTAACACACATCAACAGTGTTAATCCATTTTCGTTTTTGAGCACAGAACTGGGTAATGATAAATCGCCAACAAGTGACCTAAACGACACATCTGAATGCAATGCAAGCGCCTCAGTTATAGAACAAGATTTCAGTGATCCAAATGCGCTTCCATCGTGTAGAATATGTAAAGTATCTTTCTCGACGCGAGCCAACGCGAAACGCCATGAACGTAATATTCATGGTAAGTCGTTGGATTCATCAACACCAAGAACTAGTATAAAATCGAATGCCTCCAAGAAGCTCACACCAGAAATGTTGGGAATTTTTGACTATCAGAAACCTGAAAAATATCGTCATCTCCTCACTGAACAGAAAATTATGTACATTCGTCGAAATGAGGAGTTCCTTAAACAGTATCAAACTTTAACGTGTATTTGTTGTCCGAAAACTTTCCCAACGTACAAAACCTTTATGGCTCATATGCGAAAGAAATACCAAACACTGGCTAGAAATTTGTGCTTTAAATGCTTGAAGCAATTCCAGACCAAAGCCATGTTTGTATCTCATTTGAAGAAACGAAATTGCTTGAATCTGTACAAGGTCTACTTGAATGATGACACTATTCCAAAGTCTGGGCCTCTTAATTTATCGGATAAGGTCGGTGCAAAAGATTTGCTTATGAACAAAGTCTACGAGTGTAAGATTTGTTCTAAGGCTTTGCGGCTGAAGGTGGAGTTTAGGGCGCATGTTTATGACGAACATGCTGAACTAATGAAGAAGGATGTCCCTCCTGGATCGTGCGGATTTTGTGGTCTTGAGGTTGACGATCCTGTGGAACGGAAGCGACACTACAACAATATGGAATGCATAGTGTTCCTAAAATGCATCACTTGCGAAGAGAAATTCGATTGCCATCAAAGGTTTATTGAACACGTTTATGCGGAACATGTGACCCAGAATAACAATGATGAAATGGATCAAAACAGTATCGTTGAACACATTCCTGAGCCTAAGGAGGAACCACCAGTAGTTGCACAAAAACAATCTGATGGTAAATCGGGTGAGAATTTAAGGCTGCCGCAAAATTGCCAGATATGTGGTCAGCATTACAACAACTACAATAATGTACTTAGGCATATGGAGGCGAAGCATCCTGATCAGTTACCGACAACATATAAATGTACCAAATGCGACGTAGGCTATCCACGTCTATCAATGCTCCGGAACCACATGCTAGAAGTGCACCAGAGCAAACTCCCGAAGACAAAGAGGGATGGGATATTCTGTCGAATGTGTTCGGAAACTTTTGAGGCACGAGACAAATGGATCACCCACCAATCTGATCATCATTCACGCTACACGTGCTGCCAGTGCAATTACCAAAGTAAGAATTTAGATGAATTCAAAAAGCACATTGAAATGCATCCGATATTAGCTTCAAACTCTGCAAATAATATGCCTGGTCGATACGACTATATCATGAAGGATCTGCTTACTATAGTCAATGGTTGTCAAGAGCTCAATAATGAAAGGGAAGATGAGGATAAACCTGGGAGAAAGGAAGTACCACCttcaaaaaagattaaattagaatcagattttaaagaatgcCAAATTTGCCATAGTGTGTTCACTAGTAATTTGGGTTTATCCAATCATATGAGAGCGCACAATGCTCACGAGCAAGGGAAGAAATCCGGTCTAGCTGGTGCAAAGATAATAACAACAGATATAGCTCTGAAGCCGGAGAGTGGGCCAAAGGATGAGGTAATGATAAAGAGGGAAGAGCCAGACGCTCGGTTCAGACGGATGCGCTGTCGCATATGTCAGAGACGGTTTTCCACCAAAAAGAGCTATCGTCGGCACATGCTAATCGACCATCACGTGAAAAACGTGCCTTTCATTAAGTGCAGTGTGTGTCACGCCGAGTTTACCCATGAGAAAGGTTTGAAGGTTCACATGTTCAAAGCGCATGGAACCGTTCTGACtgatgaaataattgaagtaCAATTCGAGTGCGATGTTTGCTCAACAGTATATAGAAACGAGGAACAACTGAATGCCCATAAGGTGTCAGTCCACGGTTCAGAGGACTTTGAAGAGCCCATAGAAGAATCTCCTCCATCCGTCCCTCCCAATAATACACCGAAGTATTGGTTCCAGTGTCGTTATTGTCCATCCAATTTtgatacaaataaaaagcttGCGATACATATTAACTCCCATGAAGAGTTCGACTCCAACGACTATTCTTGCAAAGATTGTGGGAATGTGTACAGTGGGAGGAAGAGCCTGTGGGTTcatagatataaaaaacatcCGCTTATCCCCGATCCGTCTCCATGCAACGTCTGTAAGAAGACGTTCTTCGACAAAAATATGTTGGAACTTCACGTGAAATCCCACAAGCATGGTGAAGGTGTAATAGCAACCTCTGCGGTTCAGAATGATACCCAGCATTTTGCTGATGATGAGGACGAAGATATTGAGGATAACATGGATGAGAAGGTAATCACGCATCAAGTACAGGTCAGTTGCACTGTCTGTCACGAGAAATTCAGTGACGAGGAACTCTTCAGTAAACACATGCAGGTGCACGAAAGTGAATTGTACACGGACAATCCTCTAGCCGCAATGTTCGATACCGAACCTGAAGACccgaacaaatttttcatgagCAGAATGGGAGAGGACGGTGCCTTTGTTTGTGATCTCTGTCCAAAGAGCTTCCCTAATATCACCGCTCTGAAGGTGCACCGAAATTGGCATTTTAGGAGTGATAGCAAACATGCGACGGCAGATCCCAACAGTGTTTGGCGAGGAAATccaaagagaaagaaattagcCACACATCGATGTCAGTATTGCAATTCGACTTTTGTTAGCAGTAGTAACTTGCGGCGTCATATTGGGGAATTGCACAAACGTGAACTGGCCAACGGAGTTGTGCCTCCAGAAGTGTTCATCGAAAAGCATCTGGAGTGCcagaaatgtaatttaaaattccaggCAAAGGTTGAGTGGGTCGAGCACAAAATAGAACACGTAAGGAATGCGAAACATGACACGACTTTTGAATGGGGTTGTGAAATCTGTGGCAAGTTGGTTTCACGGAAAGAGCGGTTGATTCAGCACATGAATTCACACTTGAGACGGGAAGAGCAAAATGGGCACGTAAGTGGCGGCGATCAGGTTAACAGTGAAGCAGGATTTGAGAGCAATTCCCAGGATTCGGTAGGTTCCTCAAATGACCAGCAAGAAGCTGCGAATGAGGAAAACGACGAAAATGAGAATGATGATGAAGGTGAGAATAAAGATGAGAAGAATAATGTCcgagaagaaaatattactcaGAACGAAGTGGGTAATCGGGATGAAGATGAAGGTGATGATGAGGAGGACGAGGATGAGAGCGATATGAACTCGACCAGCTCAGATGACAATAGCGATGATGATTCAGACTCGGACAAGAGTTCCAGCcaggatgatgatgatgaggaCAACGAGTTCGAAGATGATAACGAGGGGCCCTACTCTTGTGACCTTTGTCAACTTTTCTTTGAGTCATCAAAGCAGCTGCAAAGGCATGTGACTAGTCACTTCCTTAATGGACCCGGATCAGTTACATTGACCGAGCTatccaaagaaaagaaatcgcCTACGGAGAATGGGGATCGTACAGACGTATCTTCGTAG
- Protein Sequence
- MTDELIVRARQNCCRLCLAPDSECVPIFTSFAADKEPLSSKIHACVNIKVSESDRLSARICHSCISYLNSWQSFKNRCIASQIKQRNWLDMAKKSAKKKFDYMRVNRSGPRSISTPPAVTNGQSPPSVLKNNRPMPLPIKIKEEPEDIEEDVPDEKVEQDSEDNMKVDLDPSEFLAKEEDEADDDEADSHLRKGQGPQILTSLGLTHINSVNPFSFLSTELGNDKSPTSDLNDTSECNASASVIEQDFSDPNALPSCRICKVSFSTRANAKRHERNIHGKSLDSSTPRTSIKSNASKKLTPEMLGIFDYQKPEKYRHLLTEQKIMYIRRNEEFLKQYQTLTCICCPKTFPTYKTFMAHMRKKYQTLARNLCFKCLKQFQTKAMFVSHLKKRNCLNLYKVYLNDDTIPKSGPLNLSDKVGAKDLLMNKVYECKICSKALRLKVEFRAHVYDEHAELMKKDVPPGSCGFCGLEVDDPVERKRHYNNMECIVFLKCITCEEKFDCHQRFIEHVYAEHVTQNNNDEMDQNSIVEHIPEPKEEPPVVAQKQSDGKSGENLRLPQNCQICGQHYNNYNNVLRHMEAKHPDQLPTTYKCTKCDVGYPRLSMLRNHMLEVHQSKLPKTKRDGIFCRMCSETFEARDKWITHQSDHHSRYTCCQCNYQSKNLDEFKKHIEMHPILASNSANNMPGRYDYIMKDLLTIVNGCQELNNEREDEDKPGRKEVPPSKKIKLESDFKECQICHSVFTSNLGLSNHMRAHNAHEQGKKSGLAGAKIITTDIALKPESGPKDEVMIKREEPDARFRRMRCRICQRRFSTKKSYRRHMLIDHHVKNVPFIKCSVCHAEFTHEKGLKVHMFKAHGTVLTDEIIEVQFECDVCSTVYRNEEQLNAHKVSVHGSEDFEEPIEESPPSVPPNNTPKYWFQCRYCPSNFDTNKKLAIHINSHEEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPLIPDPSPCNVCKKTFFDKNMLELHVKSHKHGEGVIATSAVQNDTQHFADDEDEDIEDNMDEKVITHQVQVSCTVCHEKFSDEELFSKHMQVHESELYTDNPLAAMFDTEPEDPNKFFMSRMGEDGAFVCDLCPKSFPNITALKVHRNWHFRSDSKHATADPNSVWRGNPKRKKLATHRCQYCNSTFVSSSNLRRHIGELHKRELANGVVPPEVFIEKHLECQKCNLKFQAKVEWVEHKIEHVRNAKHDTTFEWGCEICGKLVSRKERLIQHMNSHLRREEQNGHVSGGDQVNSEAGFESNSQDSVGSSNDQQEAANEENDENENDDEGENKDEKNNVREENITQNEVGNRDEDEGDDEEDEDESDMNSTSSDDNSDDDSDSDKSSSQDDDDEDNEFEDDNEGPYSCDLCQLFFESSKQLQRHVTSHFLNGPGSVTLTELSKEKKSPTENGDRTDVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00628566;
- 90% Identity
- -
- 80% Identity
- -