Basic Information

Gene Symbol
hang
Assembly
GCA_959613345.1
Location
OY390710.1:21876631-21884530[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 0.0015 0.28 13.0 0.9 3 23 80 101 79 101 0.95
2 22 0.013 2.5 10.1 2.4 2 22 166 186 165 186 0.93
3 22 2 3.8e+02 3.2 1.1 3 21 196 214 195 215 0.94
4 22 0.035 6.9 8.7 0.2 1 22 254 275 254 277 0.90
5 22 6.4 1.2e+03 1.6 0.0 3 21 290 308 289 309 0.91
6 22 0.0041 0.8 11.6 1.1 2 23 388 410 387 410 0.93
7 22 6e-05 0.012 17.4 0.2 1 23 418 441 418 441 0.96
8 22 1.3 2.6e+02 3.7 1.0 3 23 455 475 453 476 0.92
9 22 2.1 4.1e+02 3.1 3.4 1 23 479 501 479 501 0.97
10 22 0.0028 0.55 12.1 1.5 2 23 562 583 561 583 0.97
11 22 9.5e-05 0.019 16.8 4.3 2 23 631 653 630 654 0.95
12 22 0.0015 0.29 13.0 0.9 2 23 662 684 661 684 0.95
13 22 0.00034 0.067 15.0 0.1 1 23 697 720 697 720 0.96
14 22 0.00064 0.12 14.2 0.8 1 23 745 767 745 767 0.98
15 22 0.0012 0.24 13.3 0.9 1 23 775 798 775 798 0.96
16 22 5.9e-05 0.012 17.4 0.8 2 23 806 827 805 827 0.97
17 22 8.5e-05 0.017 16.9 1.6 2 23 875 896 874 896 0.97
18 22 2.6e-05 0.005 18.6 0.1 1 23 931 953 931 953 0.97
19 22 2.6e-05 0.0051 18.5 1.8 1 23 981 1004 981 1004 0.91
20 22 0.2 38 6.3 0.4 2 23 1024 1045 1023 1045 0.93
21 22 0.00068 0.13 14.1 0.3 3 23 1059 1079 1059 1079 0.99
22 22 0.0011 0.21 13.5 2.9 1 23 1232 1254 1232 1254 0.97

Sequence Information

Coding Sequence
ATGCTAATCTCGTGTACAGGGTTTTTAAACGACATAGCCTCTTCGTTTTCGGTTGCTCCTCCATACTTTGTGATTAAGAAAACAATGACAATGAATTTTGGAAATGGAGGAATTTTAAGCACAGAACTTGGGCATGAAAAATCGCTGGCAACAAATGATTTAAACGATACAACTGAATCGAATGCCGGCCCTTCAGTTATAGAGCAGGACCTTAATGATCCCAATGCGCTCCCATCTTGTAGAATATGCAAAGTCTCCTTTTCCACGCGAGCCAATGCAAAGCGTCATGAGCGTAATATTCATGGCAAATCCTTGGATTCGTCTACACCAAAAGTTAGTTTGAAACCGAATTCTTCAAAAACGGGAAAGTTTCCTCCAGAGATGTCAGGGATTTTTGATTATCACAGACCTGAAAAATATCGTCATTTGTTGACTgatcaaaaaattatgtatatacgtCGGAATGAGGAATTCCTTAAGCAGTATCAGAATTTAACATGCAAATGTTGCCCGAAGACGTTTCCCACATACAAAACTTTTATGGCTCATATGAGAAAGAAGTATCAAACATTAGCTAGAAACTTGTGTTTTAAGTGTCTAAAACAGTTCCAGACTAAACCAATGTTTGTGTCTCACCTAAAGAAGAGAAACTGTTTGAATTTGTATAAGGTCTATATGAACGATGAAACTATTCCAAAATCTGGGCCTTATCCATTGACGGAAAAGGTTGGAGCGAAGGACTTGCTTATGAACAAGGTCTATGAGTGCAAAATATGCTCTAAAGGCTTAAGACTGAAGGTGGAGTTCAGAGCCCATGTTTATGACGAACATGCTGAATTGATGAAGAAGGATGTCCCGCCTGGCTCGTGTGGCTTTTGTGGCCTTGAGGTCGAAGATCCTGTGGAACGAAAGCGGCACTACAATAACATGGAATGCATAGTTTTCCTTAAGTGCATCACTTGTGAGGAGAAATTCGATTGCTACCAGAAGTTCATAGAGCATGTATATGAAGAACATGTTATACAGAATAATAATGAAGAGATTGATCAAAGTAGCATTATTGAGTCTATTCCAGAGGCGAAGGAGGAACTTAAAGAGCCTAAGGAACTTAATATATCAAAAGCGTTTGATGGTAAATCAAGTGACTTGCGGCTCCCGCAAAGCTGTCAGATATGTGGGCAGCattacaataattacaataatgtACTTAGGCATATGGAAGCCAAACACCCGGATCAGCTGCCGACAACCTACAAATGTACCAAATGCGATGTCGGCTATCCACGTCTTTCAATGCTTCGGAATCATATGCTGGAGGTGCATCAGAGTAAACTTCCTAAGGTAAGACGAGAGGGAATTTTCTGCCGCATGTGTTCGGAGACTTTCGAGGCTCGTGAAAAGTGGATCTCGCATCAATCTGATCATCATTCACGCTATACCTGTTGCCAGTGTAATTACcaaaacaagaatttggaaGAGTTCAAGAATCATATTGAATTGCATCCGACATTAGCTTCGAAATCCACAAGTACAACTTCCAGCCGTTATGACTATATAATGAAGGATTTGCTTACCATAGTAAACGGTTGCCAAGAGCTGAATGAGGAAAGAGATAGCGAGGATAAGCTACTGAAAAAGGAGGCACCACCGGCAAAAAAGATTAAGCTCGAATCTGATTTTAAGGAATGCCAAATGTGCCATAGTGTGTTTACAAGTAATTTGGGCTTGTCGAATCATATGAGAGCACATAATGCTCAGGACCAAGGAAGAAAATCTGCTTTATCCGGTGCAAAGATAATAACAACAGATATAGCTCCAAAACAAGAAAACGGAGGACATAAGGATGAGGGGAAGAAGGAAGGAGAACCTGATGCTAGGTTTAGGCGGATGCGATGCCGGATATGTCAAAGACGGTTTTCCACTAAAAAGAGCTATCGACGACATATGCTGATTGATCACCACGTCAAAAACGTGCCTTTCATCAAATGCAGTGTTTGCCAAGCCGAATTTACCCATGAGAAAGGTCTCAAGGTTCACATGTTCAAGGCACATGGGACTGTCCTGACTGATGAAGTTATAGAAGTTCAATTTGAGTGTGACGTTTGCTCCACGGTATACAGGAATGAGGAGCAGTTGAATGCTCATAAATTATCAGTCCATGGATCAGAGGATATTGATGAACCCATGGAAGAAACTCCTCCTCCTATTCCATCGAATACTTCGAAGTATTGGTTCCAGTGCCGTTATTGCCCTTCGAACTTTGATACTAATAAGAAGCTTGCGATTCACATAAACTCTCATGAAGAATTCGATTCCAACGATTATTCCTGCAAAGACTGTGGAAACGTCTACAGCGGAAGAAAAAGCTTGTGGGTCCATAGGTACAAAAAACATCCCCTTATTCCTGATCCCTCACCATGCAACCTGTGCAACAAAACTTTCTTTGACAAAAATATGTTAGAACTTCACATTAAGTCTCATAAGAGAGAGAAGGTGCTGAATAACGACAGTATAAGATCATCATCAGTGGCTCAAAATGATACCCACATTTTTGCTGATGACGAGGAAGATGATATCGACGATACTATAGAGGAGAAAATAGTCACACCGCTGGCGCAGGTCAGTTGCACTGTTTGCCATGAGAAGTTTAGCGATGAGGATCTTTTCAGTAAACATATGCAAATGCACGAAAGTGAACTTTACACGGATAATCCTCTAGCCGCGATGTTTGACACGGAACCGGAAGATCCTAATAGATTTTTCATGAGCCGAATGGGTGAAGATGGAGCCTTTGTGTGTGACCTCTGCCCAAAGAGCTTTCCTAATCTGACTGCCCTTAAGGTGCATCGAAATTGGCACTTTAGGAGTGATAGTAAACAAGCGACTGCAGATCCCAACGCAGTTTGGCGTGGAAATccaaaaaagaagaaaatagcCTCACACCGCTGTCAGTATTGCAATTCAACATTCGTTAGCAGTAGTAATTTGCGCCGTCATATTGGTGAATTGCACAAACGCGAAATCGCTAATGGTGTAGAACCTCCAGAAGTATTCATTGAAAAGCACTTAGAATgccaaaaatgtaatttgaaattccaaacaaaGATTGAGTGGGTGGAACATAAATTGGAGCATGTAAGGAATGCAAAGCATGATACCACATTTGAGTGGGGCTgcgaaatttgcggcaaaTTGGTTTCACGCAAAGAACGATTGATCCAACATATGAACTCCCATTTGAGACGCGAAGAGCAACAAAATGGACATATAAGTGGTGGAGATCCACTGAACAGTGAAGCTGGTTTCGAGAGTAATTCTCAGGATTCAGAAGGTTCCTCCAATGATCAACAAGATACTGCAAATAATGATATCGACAATGATAACGAGAACGAAGTTGAAAATAAGGATGACGAGAAAAATGACATCCCTGAGGAAAATTTGCCTGAAGGCAGGGATAATAACGCAGATGATGACGGCGATGATGAAGCGGATGACGAAAGTGACATCAACTCGAGCAGCTCGGATGATGACAACGATGATCATGATGATAATGAGGATAATGAAGATAATGAAGATAATGATGATAACGATGATAACGATGATAATGATGATAACGATGATGATGATTCGGACTCTGATAAAAGTTCCAGCCAGGAGGAGGACGCAGAATTCGAAGACGACAATGAGGGGCCCTATTCGTGTGACCTCTGTCACCTTTACTTTGAATCATCAAAGCAGTTGCAGCGACATGTGACTAGTCACTTCCTTAACGGACCGGGATCAGTTATGTTAACTGAGCTATCCAAAGAAAAGCGAACGCCTACGGAAAATGGAGATCGAACTGATACCTCCTCATAG
Protein Sequence
MLISCTGFLNDIASSFSVAPPYFVIKKTMTMNFGNGGILSTELGHEKSLATNDLNDTTESNAGPSVIEQDLNDPNALPSCRICKVSFSTRANAKRHERNIHGKSLDSSTPKVSLKPNSSKTGKFPPEMSGIFDYHRPEKYRHLLTDQKIMYIRRNEEFLKQYQNLTCKCCPKTFPTYKTFMAHMRKKYQTLARNLCFKCLKQFQTKPMFVSHLKKRNCLNLYKVYMNDETIPKSGPYPLTEKVGAKDLLMNKVYECKICSKGLRLKVEFRAHVYDEHAELMKKDVPPGSCGFCGLEVEDPVERKRHYNNMECIVFLKCITCEEKFDCYQKFIEHVYEEHVIQNNNEEIDQSSIIESIPEAKEELKEPKELNISKAFDGKSSDLRLPQSCQICGQHYNNYNNVLRHMEAKHPDQLPTTYKCTKCDVGYPRLSMLRNHMLEVHQSKLPKVRREGIFCRMCSETFEAREKWISHQSDHHSRYTCCQCNYQNKNLEEFKNHIELHPTLASKSTSTTSSRYDYIMKDLLTIVNGCQELNEERDSEDKLLKKEAPPAKKIKLESDFKECQMCHSVFTSNLGLSNHMRAHNAQDQGRKSALSGAKIITTDIAPKQENGGHKDEGKKEGEPDARFRRMRCRICQRRFSTKKSYRRHMLIDHHVKNVPFIKCSVCQAEFTHEKGLKVHMFKAHGTVLTDEVIEVQFECDVCSTVYRNEEQLNAHKLSVHGSEDIDEPMEETPPPIPSNTSKYWFQCRYCPSNFDTNKKLAIHINSHEEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPLIPDPSPCNLCNKTFFDKNMLELHIKSHKREKVLNNDSIRSSSVAQNDTHIFADDEEDDIDDTIEEKIVTPLAQVSCTVCHEKFSDEDLFSKHMQMHESELYTDNPLAAMFDTEPEDPNRFFMSRMGEDGAFVCDLCPKSFPNLTALKVHRNWHFRSDSKQATADPNAVWRGNPKKKKIASHRCQYCNSTFVSSSNLRRHIGELHKREIANGVEPPEVFIEKHLECQKCNLKFQTKIEWVEHKLEHVRNAKHDTTFEWGCEICGKLVSRKERLIQHMNSHLRREEQQNGHISGGDPLNSEAGFESNSQDSEGSSNDQQDTANNDIDNDNENEVENKDDEKNDIPEENLPEGRDNNADDDGDDEADDESDINSSSSDDDNDDHDDNEDNEDNEDNDDNDDNDDNDDNDDDDSDSDKSSSQEEDAEFEDDNEGPYSCDLCHLYFESSKQLQRHVTSHFLNGPGSVMLTELSKEKRTPTENGDRTDTSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00628566;
80% Identity
-