Basic Information

Gene Symbol
hang
Assembly
GCA_947538895.1
Location
OX384543.1:37673346-37682064[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 0.0015 0.22 12.9 0.9 3 23 255 276 254 276 0.95
2 22 0.048 7.1 8.1 2.9 2 22 341 361 340 361 0.93
3 22 0.91 1.3e+02 4.1 1.2 3 21 371 389 370 390 0.94
4 22 0.019 2.8 9.4 0.2 1 22 429 450 429 452 0.90
5 22 6.6 9.8e+02 1.4 0.0 3 21 465 483 464 484 0.91
6 22 0.0043 0.63 11.4 1.1 2 23 557 579 556 579 0.93
7 22 6.3e-05 0.0093 17.2 0.2 1 23 587 610 587 610 0.96
8 22 0.67 99 4.5 1.1 3 23 624 644 622 645 0.93
9 22 2.2 3.3e+02 2.9 3.4 1 23 648 670 648 670 0.97
10 22 0.0012 0.18 13.1 1.1 2 23 731 752 730 752 0.97
11 22 9.9e-05 0.015 16.6 4.3 2 23 799 821 798 822 0.95
12 22 0.0016 0.23 12.8 0.9 2 23 830 852 829 852 0.95
13 22 0.00095 0.14 13.5 0.1 1 23 865 888 865 888 0.93
14 22 0.00066 0.098 14.0 0.8 1 23 913 935 913 935 0.98
15 22 0.0013 0.19 13.1 0.9 1 23 943 966 943 966 0.96
16 22 0.00062 0.092 14.1 0.5 2 23 974 995 973 995 0.96
17 22 4.7e-05 0.0069 17.6 0.5 2 23 1043 1064 1042 1064 0.97
18 22 2.7e-05 0.004 18.4 0.1 1 23 1099 1121 1099 1121 0.97
19 22 2.7e-05 0.004 18.4 1.8 1 23 1149 1172 1149 1172 0.91
20 22 0.2 30 6.2 0.4 2 23 1192 1213 1191 1213 0.93
21 22 0.0012 0.18 13.2 0.3 3 23 1227 1247 1227 1247 0.99
22 22 0.00034 0.05 14.9 1.4 1 23 1404 1426 1404 1426 0.97

Sequence Information

Coding Sequence
ATGACGGATGAACTGATTGTACGCGCGCGACAAAATTGCTGTCGCCTGTGCCTGGCCCCGGACAGTGAGTGTGTTCCCATTTTCACCAGCTTCGCCGCGGATAAGGAACCTCTTTCGTCGAAAATTCACGCTTGTGTCAACATCAAGGTTAGCGAGGCGGATCGATTGTCTGCACGGATATGCCATTCGTGCATAAGCTACCTGAACTCATGGCAGAGCTTCAAAAACCGATGCATAGCGTCGCAGATAAAGCAGAGGAACTGGCTACAAATGGCTAAAAAGACCGTCAAGAAACAGTTCGATAGCATGAGGGCTAACCAAAGTGGGCCCACAAGTGCATCGACTCCCACTACTAATGGTCAATCTCCACCATCTGCGCTCAAAAACAGGCCAATGCCACTACCGATCAAGATTAAGGAAGAACCGGAGGATATTGAAGAGGATGTCCCAGACGACAAAGTGGAGCAAGAGAGCGAAGATAACATGAAAGTTGATCTTGATCCTTCACATTTTTTGGCTAAAGATGACGAAGAACCGGAAGATGACGATGCTGTGTCACATCTTAGAAAGGGGCAGGGGCCACAAATTTTAACATCACTTGGGTTGACACATATCAACAGCGTGAACCCGTTTTCGTTTTTGAGTACAGAACTTGGCCATGACAAATCTCCGGTAACAAGTGATTTAAACGACACAACTGAATTAAACACCGGCCCAACTGTCATAGAGCAAGATCTTAATGACCCCAACGCGCTTCCATCGTGTAGAATATGTAAAGTTTCCTTCTCAACACGAGCCAATGCAAAACGTCACGAGCGTAACATTCATGGAAAATCTCTGGACTCGTCTATACCAAAAGTTAGCTTAAAACCGAATCCCACAAAGACGGGGAAGTTTACTCCAGAGATGCTAGGGATTTTCGACTATCACAAACCAGAAAAATATCGTCATCTGTTGACGGAGCAGAAGATCATGTACATTCGTCGAAATGAGGAATTCCTTAGGCAATACCAGAGTTTAACATGTACGTGTTGCTCGAAGACTTTTCCCACGTACAAAACCTTTATGGCTCATATGCGAAAGAAGTATCAAACTTTAGCTAGAAACTTGTGTTTTAAATGCTTGAAGCAATTCCAGACCAAGGCAATGTTTGTGTCGCATTTGAAGAAGAGAAACTGCTTGAATCTGTACAAGGTCTATATGAATGATGAAAGTATTCCGAAGTCAGGACCTTATCCCTTGTCGGAAAAGCTGGGAGCGAAAGACTTGCTCATGAACAAGGTCTATGAATGTAAAATATGCTCTAAGGCATTAAGGCTCAAAGTGGAGTTTAGGGCGCACGTTTATGACGAACATGCTGAACTGATGAAGAAGGATGTCCCGCCAGGGTCATGTGGATTCTGCGGTCTCGAGGTTGAAGACCCTGTGGAGAGAAAGCGACACTACAATAATATGGAGTGCATAGTGTTTCTCAAGTGTGTCACTTGTGATGAGAAATTCGATTGCCACCAAAAGTTTATAGAGCATGTCTATGCGGAACATGTAACTCAGAACAACAATGAGGAAATTGATCAAAGTAGTATCCCTGAAAGTACCCCTGAGCCTAAAGAGGAGCCTATTATTCCAAAAGCACCTGAGGGCAAATCAAGCGACCTGAGGCAGCCGCAAAGTTGCCAAATATGTGGACAGCATTACAACAACTACAATAATGTACTTAGACACATGGAGGCGAAGCATCCTGATCAGTTACCGACAACCTACAAATGCACCAAGTGTGACGTCGGTTATCCTCGTCTATCGATGCTCCGCAATCACATGTTAGAGGTGCATCAGAGTAAACTTCCTAAAGTTAGGAGGGAAGGGATTTTCTGCCGAATGTGTTCGGAGACTTTTGAGGGCCGCGAAAAGTGGATCTCGCACCAATCCGACCATCATTCACGTTATACCTGCTGCCAGTGTAATTACCAGAACAAGAACTTGGAAGAATTCAAGAATCATATTGAATTGCATCCGAATTTAGCCTCGAAGTCTACAAGTACTTCCTCCAACCGATACGACTACATCATGAAGGACTTGCTTACTATCGTCAACGGTTGCCAGGAGCTTAATGATGAAAAGGAGAGTGAGGATAAATCACTGAAAAAGGATTCACCACCGGCTAAGAAGATTAAGCTGGAATCAGATTTTAAAGAATGCCAAATTTGCCACAGCGTCTTTACCAGTAATTTAGGCTTGTCTAATCATATGAGGGCCCACAATGCCCAGGATCAAGGGAAAAAATCCGGTCTAGCTGGTGCGAAAATAATAACAACGGAAATATCTCTACACCAAGAAAATGGACAAAAAGATGAGCTAAAAAAGGAAGCAGAACCAGATGCTAGATTCCGGCGGATGCGATGTCGTATATGCCAAAGACGGTTTTCCACTAAAAAGAGCTATCGCAGGCATATGCTAATCGATCATCACGTCAAAAACGTGCCCTTCATCAAATGCAGTGTTTGTCAGGCTGAATTTACACATGAAAAAGGTCTTAAGGTTCACATGTTCAAAGCACATGGAACTGTCCTCACCGATGAAGTTATAGAAGTCCAGTTTGAGTGCGATGTTTGCTCAACTGTCTATAGGAATGAGGAACAGTTGAATGCTCATAAAGTATCTGTCCATGGCTCAGAAGATGTGGACGAGACTATGCAAGAAACTCTTCCACATGTCCCCCAGAATGCACCAAAGTATTGGTTCCAGTGCCGCTATTGCCCATCCAATTTTGATACTAATAAAAAGCTTGCAATTCACATAAACTCCCACGAAGAATTCGACTCAAATGACTATTCTTGCAAAGACTGCGGGAATGTTTACAGTGGAAGGAAGAGCTTGTGGGTTCACAGGTACAAAAAACATCCTCTTATACCTGATCCCTCACCATGCAACCTTTGCAACAAAATTTTCTTCGACAAAAATATGCTGGAGCTTCACGTTAAATCCCATAAAGAAGGGAAAGTACTCAACAGTGAGAGTGTAAGAGCATCCTCAGTAGCTCAGAACGATACCCAGAATTTCGCTGATGATGAAGAAGATGATGTTGAGGAAACCGTGGAAGAGAAGGTAATCACACCGCTGGCGCAAGTTAGTTGCACCGTTTGTAATGAGAAGTTTAGCGATGAAGACCTCTTCAGTAAACACATGCAGATGCACGAAAGTGAACTCTACACTGATAATCCTCTAGCTGCGATGTTTGATACAGAACCTGAAGACCCTAACCGGTTCTTCATGAGCAGGATGGGGGAGGATGGCGCATTTGTCTGTGATCTCTGTCCGAAAAGCTTTCCTAATCTCACCGCCCTCAAGGTTCATCGGAATTGGCACTTTAGGAGTGACAGCAAACAAGCAACCGCAGATCCCAATGCAGTTTGGCGAGGGAATCCAAAGAAGAAAAAAGTTGCCTCACATCGTTGTCAGTATTGTAATTCAACATTTGTCAGCAGCAGTAACTTGCGGCGTCACATTGGTGAATTGCACAAACGTGAAATTGCCAATGGAGTAGAACCTCCAGAAGTATTCATTGAAAAGCACCTAGAGTGCCAAAAATGCAACTTAAAGTTCCAAACTAAGATTGAGTGGGTGGAACATAAATTGGAGCATGTAAGAAATGCAAAGCATGACACCACATTCGAGTGGGGCTGCGAAATCTGCGGTAAATTAGTTTCACGCAAAGAGCGGTTGGTCCAGCACATGAACTCGCACATAAGACGTGAAGAGCAACAAAATGGACATGTTAGCGGGGGAGATCCTCTTAATAGTGAAGCAGGATTCGAGAGTAATTCTCAGGACTCGGGCTCCTCcaatgaccagcaagaggctgcaaacgaggataatgaggacaacgaggataatgatgataacgaggataatgaggataacgaggataacgaggataatgaggataatgaggataacgaggataatgaggataacgagaatgaggatgaaattgagaacaaagatgaaaaacatgatgcgcccgatgaagatatgcctcaagccgccgatgttgctaatcacacggacgacggtgatgacgaggcggacgacgaaggtgacatgaactctactagttcagatgatgacaatgacgatgatgatgattcggactccgacaagagctccagccaggaggaggacgaagagttcgaggacgacaacgaGGGGCCCTACTCGTGTGACCTCTGCCAACTGTTCTTTGAATCGTCAAAGCAGCTGCAGCGGCATGTGACTAGTCACTTTCTTAACGGACCCGGATCAGTTACATTAACTGAGTTATCCAAAGAAAAGCAAACGCCTACGGAGAATGGAGATCGAACTGATACCTCCTCGTAG
Protein Sequence
MTDELIVRARQNCCRLCLAPDSECVPIFTSFAADKEPLSSKIHACVNIKVSEADRLSARICHSCISYLNSWQSFKNRCIASQIKQRNWLQMAKKTVKKQFDSMRANQSGPTSASTPTTNGQSPPSALKNRPMPLPIKIKEEPEDIEEDVPDDKVEQESEDNMKVDLDPSHFLAKDDEEPEDDDAVSHLRKGQGPQILTSLGLTHINSVNPFSFLSTELGHDKSPVTSDLNDTTELNTGPTVIEQDLNDPNALPSCRICKVSFSTRANAKRHERNIHGKSLDSSIPKVSLKPNPTKTGKFTPEMLGIFDYHKPEKYRHLLTEQKIMYIRRNEEFLRQYQSLTCTCCSKTFPTYKTFMAHMRKKYQTLARNLCFKCLKQFQTKAMFVSHLKKRNCLNLYKVYMNDESIPKSGPYPLSEKLGAKDLLMNKVYECKICSKALRLKVEFRAHVYDEHAELMKKDVPPGSCGFCGLEVEDPVERKRHYNNMECIVFLKCVTCDEKFDCHQKFIEHVYAEHVTQNNNEEIDQSSIPESTPEPKEEPIIPKAPEGKSSDLRQPQSCQICGQHYNNYNNVLRHMEAKHPDQLPTTYKCTKCDVGYPRLSMLRNHMLEVHQSKLPKVRREGIFCRMCSETFEGREKWISHQSDHHSRYTCCQCNYQNKNLEEFKNHIELHPNLASKSTSTSSNRYDYIMKDLLTIVNGCQELNDEKESEDKSLKKDSPPAKKIKLESDFKECQICHSVFTSNLGLSNHMRAHNAQDQGKKSGLAGAKIITTEISLHQENGQKDELKKEAEPDARFRRMRCRICQRRFSTKKSYRRHMLIDHHVKNVPFIKCSVCQAEFTHEKGLKVHMFKAHGTVLTDEVIEVQFECDVCSTVYRNEEQLNAHKVSVHGSEDVDETMQETLPHVPQNAPKYWFQCRYCPSNFDTNKKLAIHINSHEEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPLIPDPSPCNLCNKIFFDKNMLELHVKSHKEGKVLNSESVRASSVAQNDTQNFADDEEDDVEETVEEKVITPLAQVSCTVCNEKFSDEDLFSKHMQMHESELYTDNPLAAMFDTEPEDPNRFFMSRMGEDGAFVCDLCPKSFPNLTALKVHRNWHFRSDSKQATADPNAVWRGNPKKKKVASHRCQYCNSTFVSSSNLRRHIGELHKREIANGVEPPEVFIEKHLECQKCNLKFQTKIEWVEHKLEHVRNAKHDTTFEWGCEICGKLVSRKERLVQHMNSHIRREEQQNGHVSGGDPLNSEAGFESNSQDSGSSNDQQEAANEDNEDNEDNDDNEDNEDNEDNEDNEDNEDNEDNEDNENEDEIENKDEKHDAPDEDMPQAADVANHTDDGDDEADDEGDMNSTSSDDDNDDDDDSDSDKSSSQEEDEEFEDDNEGPYSCDLCQLFFESSKQLQRHVTSHFLNGPGSVTLTELSKEKQTPTENGDRTDTSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00628566;
90% Identity
-
80% Identity
-