Dani016586.1
Basic Information
- Insect
- Dryomyza anilis
- Gene Symbol
- lrrfip2
- Assembly
- GCA_951804985.1
- Location
- OX638132.1:59369570-59370757[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-108 2.4e-104 349.9 23.8 1 299 30 319 30 320 0.95 2 2 0.17 2.1e+03 -1.3 4.0 220 245 348 373 322 394 0.46
Sequence Information
- Coding Sequence
- ATGGACAGTGCAAACGCCGTGGGGCGACGCCGAGGTAGTTCGCGTGTTAATGCCGAAGACCAGGCGCTGGACCAGATTGCAAAAGAGGCAGAGGCGCGCCTTGCTGCACGTCGACAGGCACGGGCCGAAGCGAGAGAAGTGCGCATGCGTGAACTGGAGCGGCAGCAGAAACAGCTTGAACACAATGCCGATCGCGTCTTCGATATGCACACAGTTGCTGGATTGGACCCATTGGCACGCACGCGCCTAGTGTCTAGCGTAGGGGGCTCGCCGGTCACCCGAGCCAGTTCGATGTCGTCGCGACGCAGCAGCGAAGACTCACTGGAGGAGGAAGGTCGCAGCCTGCGCGACATGCGACACGAACTAAAGGATGTGGAGGAGCGCTTTCGGAAGGTTATGATAGCAAATGCGCAGCTGGACAACGACTGTGCAGCGCAGACGTATCAAATACAGCTGCTGAAGGACAAGTTGGAGGAGATCGGCGAGACGCATGCTCAACTGCAGCGCGAATTCAGAGACAAGTCAAGAGAGTTCGGTGTTTTGAAAAGGAATAACGAAAAATTTCAGGATGAATTAAAGCTGGTGCAGGGCCAGCTGCACGAACGTGACACGCTGATTGCTGAACAGGGTCTGGTCATTGTGTCGGTCGAAAACGAAGATGGCACAGACGCGAAACGCGCCCTAGTCACGGTGGATAATGCGCAGCTGTTGGGCTCGGTGCAGGGCTCCCTCGACATACGACTGAAGAAGTTCAGCGAAGAAAAGCAACAGCTGTTGGGTGAGGTGCAACAATTGCAGCAGCAGTTGGAGGGCTACAAAGCGCAGGGTAAGGGCAGAGCAAACTCTTTGAATGGGCCGTATGCAGCAGACGATGACGACTACGAAGCACAAAGAGAAGCCAACAAAATCATTGCCGACTTCAAATACAAGCTGCAGAAGGCCGAGCAGGAGGCTGCGAGTCTACAGGCCAGTTTGGCGCGCTCGGAAACACAGGTCATTCGCTATAAAAGCACAGCAGAGGCAGCTGAAAAGGCCGAAACTGAGTTGAAGATCGAACGTAGGAAATTGCAGCGCGAAAACCGCGAGGCCATGGAGCGCTTGGAGGAGCTGGAGACTTCCAACAATCACCTGCTGAAGCGCTTGGACAAATTGAAGAATGCCAAGAGCACGCTGCTCAAGGAGCTTTGA
- Protein Sequence
- MDSANAVGRRRGSSRVNAEDQALDQIAKEAEARLAARRQARAEAREVRMRELERQQKQLEHNADRVFDMHTVAGLDPLARTRLVSSVGGSPVTRASSMSSRRSSEDSLEEEGRSLRDMRHELKDVEERFRKVMIANAQLDNDCAAQTYQIQLLKDKLEEIGETHAQLQREFRDKSREFGVLKRNNEKFQDELKLVQGQLHERDTLIAEQGLVIVSVENEDGTDAKRALVTVDNAQLLGSVQGSLDIRLKKFSEEKQQLLGEVQQLQQQLEGYKAQGKGRANSLNGPYAADDDDYEAQREANKIIADFKYKLQKAEQEAASLQASLARSETQVIRYKSTAEAAEKAETELKIERRKLQRENREAMERLEELETSNNHLLKRLDKLKNAKSTLLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00366502; iTF_01415014; iTF_01181153; iTF_01181154;
- 90% Identity
- -
- 80% Identity
- -