Tfer026367.1
Basic Information
- Insect
- Tetanocera ferruginea
- Gene Symbol
- lrrfip2
- Assembly
- GCA_958299015.1
- Location
- OY282642.1:88393076-88394248[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-107 2.9e-103 346.7 29.0 1 299 30 314 30 315 0.94 2 2 0.17 2.8e+03 -1.3 3.9 222 245 345 368 320 389 0.45
Sequence Information
- Coding Sequence
- atggataGTTCCAGTGCAATTGGAAGACGTAGAATAAATTCACGAGTCAATGCCGAGGACAAGGCACTGGACCAGATTGCAAAAGAGGCTGAAGCACGATTAGCCGCACGCCGGCAAGCACGTGCTGAGGCACGTGAAGTGCGCATACGTGAGTTGGAGCGTCAACAAAAAAAGTTGGAACAAAATGCTGATCGTGTATTTGATATGCACTCAGCCGCTGGACTTGATTCCATGTCTAGATCGCGACTTGTGGCTGGATCGCCGGTCACAAGAGCAAGTTCAATGTCATCACGTCGTAGCAGTGAAGATTCGTTAGAAGAAGAGGGCCGTAGCCTGCGTGACATGCGACACGAACTCAAAGATGTTGAGGAACGTTTCCGTAAAGTAATGATTGCGAATGCGCAGCTTGACAATGAATGTGCTTCGCAAACATATCAAATACAGTTGCTGAAAGACCAACTAGAAGAGGTGGGTGAGACTTACACTCAACTGCAGCGAGAGTTTAAAGATAAAACGCGTGATCATAGTGCGCTGAAACGTAATCTCGACAAACTAAATGAAGAGCTAAAATTGGTACAAGGGCAGCTTGAGGAACGTGACAAACTGATACAGGAACAAGGTCTTCTCATAGTATCAGTTGAAAATGTGGACGGCACTGATGCAAAACGCGCTCTAGTCACTGTGGATAATGCGCAGCTGTTGGGCTCTGTACAGGGTTCGCTGGATGTACGTCTCAAGAAGTTCAGCGAAGAAAAACAGCAGCTCATGGTCGAGGTTCAGAATTTGGAGCAGCAATTGGCAACTTATAAATCACGTGGAGGAAAATCAAACTCATTGAATGGACCCGCGGGCTtagatgatgattatgatgcacAAAGGGAGGCAAATAAAATCATATCGGACTACAAATACAAACTGCAGAAATCCGAACAAGAAGTCGCTAGTCTACAAGCCGGCTTGGCGCGTTCAGAAACCCAAGTTATACGCTATAAGAGCACCGCGGAAGCAGCAGAAAAAGCAGAAACGGAGTTGAAAATAGAACGAAGAAAGCTGCAGCGTGAAAATCGTGAAGCTATGGAACGTTTAGAAGAATTGGAAACATCAAATAATCATCTACTTAAACGTTTGGACAAACTGAAGAATGCGAAAAGTGCTCTGCTTAAAGAGCTCTGA
- Protein Sequence
- MDSSSAIGRRRINSRVNAEDKALDQIAKEAEARLAARRQARAEAREVRIRELERQQKKLEQNADRVFDMHSAAGLDSMSRSRLVAGSPVTRASSMSSRRSSEDSLEEEGRSLRDMRHELKDVEERFRKVMIANAQLDNECASQTYQIQLLKDQLEEVGETYTQLQREFKDKTRDHSALKRNLDKLNEELKLVQGQLEERDKLIQEQGLLIVSVENVDGTDAKRALVTVDNAQLLGSVQGSLDVRLKKFSEEKQQLMVEVQNLEQQLATYKSRGGKSNSLNGPAGLDDDYDAQREANKIISDYKYKLQKSEQEVASLQAGLARSETQVIRYKSTAEAAEKAETELKIERRKLQRENREAMERLEELETSNNHLLKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00624743;
- 90% Identity
- iTF_01181154;
- 80% Identity
- -