Dwil018527.1
Basic Information
- Insect
- Drosophila willistoni
- Gene Symbol
- bab1
- Assembly
- GCA_018902025.1
- Location
- JAFEWB010000700.1:6859156-6862219[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.3e-18 1.1e-14 54.0 0.0 1 43 55 98 55 100 0.95 2 3 2.7 6.7e+03 -3.0 0.4 7 18 182 192 179 192 0.82 3 3 0.22 5.5e+02 0.5 0.2 15 23 217 225 215 233 0.81
Sequence Information
- Coding Sequence
- ATGATGGAGAATTCTCATGCCTGGATGGGTGCTACCGGATCCACGCTGGCAGCAGATAGCTATCAATATCAATTGCAATCGATGTGGCAAAAATGCTGGAACACCAATCAAAATCTAATGCATCATATGCGTTTCCGTGAGCGTGGTCCATTGAAATCCTGGCGTCCCGAAACGATGGCCGAGGCCATCTTTAGTGTCCTCAAGGAGGGACTCTCTCTGTCGCAGGCGGCACGCAAATATGATATACCATATCCCACCTTTGTTCTATATGCGAATCGTGTCCATAATATGCTTGGACCATCCATCGATGGAGGTCCCGATCTGAGGCCCAAGGGCCGTGGCCGGCCACAGCGCATTCTGCTTGGCATTTGGCCGGATGAGCATATCAAGGGTGTGATCAAGACTGTGGTGTTCCGTGATGCCACCAAGGAATTGAAGGATGACTCCGCTTTGGGATTGGGTGGTCATATGCCGCCCTATGGTCGTCATTCGCCCGTATTTCCCTTGCAGGACATGAGCTTAAGCTATCCGGGAGCTGCTAGCGCCGCAGCTCTGGCTTGTTCCAATGGCATGGGTGGCGGCGGAGCTGGAGTTGGTGTGGGAGTGGGAGGCGGTCCGTCGGTTGTCGGCGGACCCGGGCCGGATCAGGGCCAAATGTCACAGGAGACGGCAGCTGCTGTCGCCGCTGTGGCCCACAATATACGCCAGCAGATGCAGATGGCCGCTGCAGTGCAGCAGCAGCATCAGCATGGGGAAGCGGGACCGCCACCAGGGCTCTTCAATTTGCCACCACATCTGGCTGGCAGTGGTCCGGTGTTGGGTAGAGGGAGCAGCATTTCGCCAGCACTGAGCAGTGGCTCGGGCCCCAGGCATGCGCCACCCTCATCGCCCTGCGGTCCCGCCGCCCAGCCAGGATCGGATTATATGGGAACGAAGTGA
- Protein Sequence
- MMENSHAWMGATGSTLAADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDATKELKDDSALGLGGHMPPYGRHSPVFPLQDMSLSYPGAASAAALACSNGMGGGGAGVGVGVGGGPSVVGGPGPDQGQMSQETAAAVAAVAHNIRQQMQMAAAVQQQHQHGEAGPPPGLFNLPPHLAGSGPVLGRGSSISPALSSGSGPRHAPPSSPCGPAAQPGSDYMGTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00555006; iTF_00523618; iTF_00577704; iTF_00555770; iTF_01555339; iTF_01557487; iTF_01558215; iTF_01556756;
- 90% Identity
- iTF_00523618;
- 80% Identity
- -