Dpro017333.1
Basic Information
- Insect
- Drosophila prosaltans
- Gene Symbol
- bab1
- Assembly
- GCA_018151275.1
- Location
- JAECWY010000550.1:5456349-5460774[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6e-18 1.1e-14 54.1 0.0 1 43 55 98 55 100 0.95 2 2 2.8 6.4e+03 -2.8 0.2 7 18 182 192 181 192 0.81
Sequence Information
- Coding Sequence
- ATGATGGAGAATTCTCATGCCTGGATGGGTGCCACCGGATCAACACTGGCAGCAGATAGCTATCAATATCAATTGCAATCGATGTGGCAAAAATGCTGGAACACCAATCAAAACCTAATGCATCATATGCGATTCCGGGAACGTGGACCATTGAAATCTTGGCGACCGGAAACAATGGCCGAGGCCATATTTAGTGTCCTCAAGGAGGGTCTCTCCCTATCGCAGGCAGCACGAAAATATGATATACCGTATCCCACCTTTGTTCTATATGCAAATCGTGTCCATAATATGTTGGGACCATCCATTGATGGTGGTCCCGATCTGAGGCCCAAAGGCCGCGGTAGGCCACAACGTATTCTTCTGGGCATTTGGCCGGATGAGCATATCAAGGGTGTCATTAAGACTGTGGTATTCCGGGATGCCACCAAAGACATGAAGGATGATAGTACTCTGGGTGGACTCGGTGCTCATATGCCGCCCTATGGTCGTCATTCGCCCGTATTTCCTTTGCAGGATATGAGCCTAAGTTATCCGGGAGCTAGTGCCGCAGCGCTAGCTTGTTCAAATGGAATGGGCGGCGGTGGAGCTGGTGTGGGGGGCGGACCATCTGTTGTTGGCCCTGGCCCGGATCAGGGACAAATGTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGGAAGCGGGGCCGCCACCAGGACTCTTCAATTTGCCACCACATCTGGCTGGCAGTGGTCCGGTGTTGGGTAGAGGGAGCAGCATATCGCCAGCATTGAGCAGCGGCTCGGGGCCAAGGCATGCGCCACCCTCATCACCCTGCGACAAGGAGTCCGCTGTCTGA
- Protein Sequence
- MMENSHAWMGATGSTLAADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDATKDMKDDSTLGGLGAHMPPYGRHSPVFPLQDMSLSYPGASAAALACSNGMGGGGAGVGGGPSVVGPGPDQGQMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEAGPPPGLFNLPPHLAGSGPVLGRGSSISPALSSGSGPRHAPPSSPCDKESAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00618322;
- 90% Identity
- iTF_00555770; iTF_00555006;
- 80% Identity
- -