Zorn015024.1
Basic Information
- Insect
- Zaprionus ornatus
- Gene Symbol
- bab1
- Assembly
- GCA_018904035.1
- Location
- JAEIFZ010000260.1:4855680-4857929[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-18 7e-15 54.4 0.0 1 43 55 98 55 100 0.95 2 2 1.6 4e+03 -2.4 0.8 9 17 212 223 203 231 0.50
Sequence Information
- Coding Sequence
- ATGATGGAAAACTCACACGCTTGGATGGGAGCTACAGGGTCCACGCTAGCAGCAGACAGCTACCAGTATCAGTTGCAGTCCATGTGGCAAAAGTGCTGGAACACCAATCAGAATCTCATGCATCATATGCGCTTTCGCGAACGTGGCCCTCTTAAATCGTGGCGTCCCGAGACCATGGCCGAGGCTATTTTCAGCGTACTCAAGGAAGGACTATCCCTGTCGCAGGCGGCACGCAAATATGACATACCCTATCCGACGTTCGTGCTCTATGCGAATCGAGTGCACAACATGCTGGGACCGTCCATCGATGGTGGCCCTGATTTGAGGCCCAAGGGACGAGGAAGGCCGCAGCGCATACTCTTGGGCATTTGGCCGGATGAGCACATCAAGGGCGTCATCAAGACGGTGGTTTTTCGCGACACCAAGGACATTAAGGACGACGGCATGGGCGGTCATATGCCGCCATACGGCCGGCATTCGCCCGTATTTCCTTTGCAGGACATGTCGCTAAGTTATCCCGGCGCTAGTGGCAGCGCAGCCAGTCTAAGCACCTTAGCCTGCCCCAACGGCATGGGCAGCGGGGGCGGAGTTGGCCCCGGCGATCAACAAATGTCCCAGGAGCAAATGTCGGCGGTGGCCGCTGTGGCCCACAATATACGTCAGCAGATGCAAATGGCCGCAGCAGCGCAGCATCAGCACGGGGAGGCGGGGCCGCCGCCAGGGCTCTTCAATTTGCCACCGCATTTGACAGTGGAACCCATTACCACGAGCGGCGAATAG
- Protein Sequence
- MMENSHAWMGATGSTLAADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDTKDIKDDGMGGHMPPYGRHSPVFPLQDMSLSYPGASGSAASLSTLACPNGMGSGGGVGPGDQQMSQEQMSAVAAVAHNIRQQMQMAAAAQHQHGEAGPPPGLFNLPPHLTVEPITTSGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00618322;
- 90% Identity
- iTF_01558215;
- 80% Identity
- -