Dtan015544.1
Basic Information
- Insect
- Drosophila tani
- Gene Symbol
- lrrfip2
- Assembly
- GCA_008042535.1
- Location
- VNJO01004770.1:6879-10664[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.4e-119 2.1e-114 382.2 18.1 1 299 29 326 29 327 0.96 2 2 0.041 9e+02 -0.8 3.4 218 241 353 376 329 400 0.51
Sequence Information
- Coding Sequence
- ATGGAAAGTGCCAGTACTGGTCGCCGAAGGAACAACATGCGAGTCAATGCGGAGGATAATGCACTAGATCAAATAACAAAGGAGGCGGAGGCACGACTTGCAGCGCGTCGACAAGCTCGTGCCGAGGCCCGCGAGATTCGTATGCGAGAGCTGGAGCGTCAAcagaaggagctggagctaaCGGCTGACCGGGTATTCGATATGCAAAGCACCActgccggcggcggcgcagGTGGTGGCGCAGATGCCCTCCTCTCGGCCCATCCCTCGCGCCTCGTCTACGGCGGACTGATAAATGTGGCCCGTGCATCAGTGTCGCGGCGCAGCAGCGAGGACTCTCTGGAGGATGACGGCCGAAGTTTTCGAGACTTCAAGCATGAGCTTAAAGACGTTGAGGAACGGTTTCGGAAAGCGATGATAACGAATGCCCAGCTGGACAACGATCGTGCTTCGCAGGCCTACGAGGTGAAACTGCTCAAGGACAAGTGCGAAATTATGCAGGAATCGTTTGCCCAACTGCAGCGCGAATTTAAGGAGAAGATGCGCGACTGCAATGCCCTCAAACGAAGCCTGGATCGCGCCAATCTCGAGCTAAAGCTAGTACAAGGACAGTTAAATGAGCGGGACTTGTTGATATCGGAGCAGGGCCTTCTGATTGTGGCTGTTGAGAACGAGGATGGCAGCGATGCCAAGCGGGCTCTGGTCAGTGTTGAGAACGCCAAGCTCTTGGCGTCCGTTCAGGGTTCTTTAGATGTTAGACTTAAAAAATTCAGTGACGAAAAACAGCGACTGCTTTCCGAGGTGCACAGTCTTCACGAGCAGCTTGATGCATACAAAAGTGAGGGCATGACTGGAGGATCTGGCAGCTTTGCACATGGTTCTTTTGGCGAAGACGATGATTACGAGGCTCAAAGGGAGTCAAACAAAATCATTTCAGACTATAAATATAAGCTGCAAAAGGCTGAACAAGAAATCGCCAATTTACAATCGAGTTTAGCACGTTCAGAGACTCAAGTCATTCGATACAAAAGCACTGCGGAAGCCGCCGAAAAGTCAGAGGCTGAATTAAAAGTCGAGCGCCGCAAGCTACAACGTGAGCATCGGGAAATACTGGAGAGATTGGAGGAAGCGGAGACGGCAAATAACCATTTGTTGAAACGTTtggataaattaaaaaacgcaAAGAGCGCCATTCTAAAAGACTTATGA
- Protein Sequence
- MESASTGRRRNNMRVNAEDNALDQITKEAEARLAARRQARAEAREIRMRELERQQKELELTADRVFDMQSTTAGGGAGGGADALLSAHPSRLVYGGLINVARASVSRRSSEDSLEDDGRSFRDFKHELKDVEERFRKAMITNAQLDNDRASQAYEVKLLKDKCEIMQESFAQLQREFKEKMRDCNALKRSLDRANLELKLVQGQLNERDLLISEQGLLIVAVENEDGSDAKRALVSVENAKLLASVQGSLDVRLKKFSDEKQRLLSEVHSLHEQLDAYKSEGMTGGSGSFAHGSFGEDDDYEAQRESNKIISDYKYKLQKAEQEIANLQSSLARSETQVIRYKSTAEAAEKSEAELKVERRKLQREHREILERLEEAETANNHLLKRLDKLKNAKSAILKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00336724;
- 90% Identity
- iTF_00527298; iTF_00533092; iTF_00489365; iTF_00593827; iTF_00617639; iTF_00594541; iTF_00524405; iTF_00561749; iTF_00482971; iTF_00480157; iTF_00531645; iTF_00541064; iTF_00525870; iTF_00488655; iTF_00612803; iTF_00491504; iTF_00571888; iTF_00478009; iTF_00492223;
- 80% Identity
- -