Dboc001466.1
Basic Information
- Insect
- Drosophila bocki
- Gene Symbol
- Lrrfip2_1
- Assembly
- GCA_008042715.1
- Location
- VNJY01002677.1:48987-52968[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.4e-119 7.2e-115 383.3 17.9 1 299 29 324 29 325 0.95
Sequence Information
- Coding Sequence
- ATGGAAAGTGCCAGTACTGGTCGCCGAAGGAACAACATGCGGGTCAATGCGGAGGACAATGCACTAGATCAAATAACGAAAGAGGCGGAGGCCCGGCTGGCAGCGCGTCGACAAGCTCGTGCCGAGGCCCGCGAGATCCGCATGCGGGAGCTGGAGCGACAGCAAAAGGAGCTGGAGCTAACGGCCGACCGTGTATTCGATATGCAAAGCACCACTGGCGTCGGTGCAGGCGGTGGCGACACACTCCTCTCGACGCATCCCTCGCGGCTTGTCTATGGCGGCCTGGTAAATGTGGCCCGTGCATCGGTATCGCGGCGTAGCAGTGAGGACTCATTGGAGGATGATGGCCGAAGTTTTCGTGACTTCAAGCATGAGCTTAAAGACGTTGAGGAACGGTTTCGGAAGGCGATGATAACGAATGCCCAGCTGGACAACGACCGTGCTTCCCAGGCTTACGAGGTGAAACTGCTCAAGGATAAATGCGAAATAATGCAGGAATCGTTTGCCCAACTGCAGCGCGAATTTAAGGAGAAGATGCGCGACTGCAATGCCCTCAAACGGAGCTTGGATCGGGCCAATCTCGAGCTGAAGCTCGTGCAAGGCCAGTTAAATGAGCGGGACTTGTTGATATCGGAGCAGGGCCTTCTGATTGTGGCTGTTGAGAACGAGGATGGCAGCGATGCCAAGCGGGCTCTAGTTAGTGTTGAGAACGCCAAGCTCTTGGCTTCCGTTCAGGGTTCTTTAGATGTTAGACTCAAAAAGTTCAGCGACGAAAAGAACAGATTGCTATCCGAGGTGCACAGTCTTCACGAACAGCTTGATGAATATAAAAGTGGAGGAATGGCTGGTGGATCTGGCAGCTTTGCACATGGTTCTTTAGGCGAAGACGATGATTACGAGGCTCAAAGGGAGTCAAACAAAATCATTTCAGACTATAAATATAAGCTGCAAAAGGCTGAACAAGAAATCGCCAATTTACAATCGAGTTTAGCACGTTCAGAGACTCAAGTCATTCGATACAAAAGCACTGCGGAAGCCGCCGAAAAGTCAGAGGCTGAATTAAAAGTCGAGCGCCGCAAGCTACAACGTGAG
- Protein Sequence
- MESASTGRRRNNMRVNAEDNALDQITKEAEARLAARRQARAEAREIRMRELERQQKELELTADRVFDMQSTTGVGAGGGDTLLSTHPSRLVYGGLVNVARASVSRRSSEDSLEDDGRSFRDFKHELKDVEERFRKAMITNAQLDNDRASQAYEVKLLKDKCEIMQESFAQLQREFKEKMRDCNALKRSLDRANLELKLVQGQLNERDLLISEQGLLIVAVENEDGSDAKRALVSVENAKLLASVQGSLDVRLKKFSDEKNRLLSEVHSLHEQLDEYKSGGMAGGSGSFAHGSLGEDDDYEAQRESNKIISDYKYKLQKAEQEIANLQSSLARSETQVIRYKSTAEAAEKSEAELKVERRKLQRE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00336724;
- 90% Identity
- iTF_00606300;
- 80% Identity
- -