Dsub010956.1
Basic Information
- Insect
- Drosophila subsilvestris
- Gene Symbol
- Mblk-1
- Assembly
- GCA_035043285.1
- Location
- JAWNNB010001746.1:1602401-1614322[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.0078 13 5.7 0.0 1 24 323 346 323 347 0.89 2 2 1.2e-18 1.9e-15 56.4 0.0 1 43 798 841 798 843 0.95
Sequence Information
- Coding Sequence
- ATGGGTCgcaggaaatggaaaaattatcaAGAGCAAGCGACGCGCAGCCAACTGAATATCGAGGAGCAACAGCCAATAGCTACAGCCGGTtccgacgaggacgaggacgaacCATACAACAAACACAACCATAACAAGAGCAACAGAAACCACTGTAAACCAGagaaccaccaccaccaccaccgttTAGAGCAGGAGTTTGAGGAGGATTTTGAGAACCAAACATCACACGATTCATCACGTACAGCAACACCAATAAGTATACCATCACCACCGCCAGAACCCAACGATTGGAGACCGTCGGATAAGTGCAATTTCTGTGTTAACGGTCGCCTGCTAACGGTGAACGCCCAGGGCCAATTGGTGGCCGAAACGGTGGCACCCACAGCCCACAACTGCAGTACAAGCAGTAAAGGCCACATATACCACAACGATCAACACGACAGTGACAGCAATTCTAGCGCATCGCTGCAACAACACAGCAATAACAGCAAGTCTGGGGCACGCaacattgctgctgctgcaagtgcaacaccaacaaccggcagcggcaccagcaccggcaccggcaccggcaacTCCCTGGAACTGTACAAGCTGCTTACCCAAAGGGCAGCCAAAATGACATCAATGGACTCGATGGCCGCACAGCTGGCCCAGTTCTCATTGCTGGCGGCCGACATCAATCTGATGAACTCTCTGgccagccaacagcaacagcagcaacagcaacagcagcaacatccgcAACATAACTCGGTAACACCAACTACCTCAGAACTACTATCTGCAGCCGCCATCAGTCCCGCACTCAAAGATAcacccagtcccagtgccgATGCCCCGCTCGATCTTAGCAGCAAGCCATCGCCAAATTCATCGATTAGCGGCGATGTAAAGTCCATCAGAGCCCTCTCGGACTgtcccacgcccacgcccacgccttCGTCGGGGCGAAGGGCCTACAGCGAGGAGGAACTGAACAGGGCCCTGCAGGATGTGATGGCCAATAAGCTGGAACCCCGCAAGGCGGCCCGTCCAAGCCTTATGAACAAGCTGGCGCACCACGAGCTCGAGCAAGAGGAGCCGGATGAGCCGGAGGACTCTGCAGACGAGGCTGAGGTGGACAGCAACGCTTCCACACCGGCACCGCCCTATCCAGAGTTTGACCAACGCATCGCGGCCACGGCCCAGCTGCGCAAACTGAGCGGCCACCTGTCCGAGCACAATGGCAGCGAGGATCTGGGCGAGGACCTGGAGAGCGGGGGGCAGCACTCGCCGAAGCTCTCAAGGATCCCAGGACCCGCCAATGCGGTGGCTCCCGGCGGCCTGCCAATTCCGATCGATGCCAATGTTCTGCTGCACACTCTCATGCTGGCGGCTGGCATCGGTGTGATGCCCAAGTTGGACGAGACCCAAACGGTGGGGGACCTGATCAAGGGCCTGCTGGTGGCCAATACGGGGGGCATTatgaacgaggcgctcatcaatcTGCTGGCCGCCAGTCAGCAGGAgaacagcaatggcaatgccgcCAGCttgctcctgcagcagcagcagcagcaacaccagcaccagcagcaattGAATGCCTTTCATCATCGCCTACCAAAGTCTGAAACGCCCGAGACGAGCTCCTCCCTGGATCCCAATGAGGCCAGCGAGGATCCCATACTGAAGATTCCGTCCTTCAAGGTCAGCGGGCCGGCCAGCATCTCGCCCAGCAtcagccacaaccacaaccacagccacagccaccatcagcagcagcatcagcagcaacagcagcagcagcaccaacatcaccatcaccaccacaaCAATCACAGCTCCCACTCCAACAGCAATCGGAACGGGGGCAGAGAGCACAGTCCACACTCGGTCTCGCCGATGCTGGCCGCCGCGGTGTCCAACAGCAGCGCcagtgccgctgccgccgccgccgccgccggccTGCTCTCGGCCTCGCCCACCTCCATCCAGAAGATGATGGCCAGCAACATCCAGCGGCAGATCAACGAGCAAAGCAGCCAGGAGGCAGCGGCAATAGCGGCGGCcacatccagcagcagcctgcGAAACGGCAGCACTAGTGCCGGCAGCGACTGCAGCAACAATGGGGCAGCATccggcaacaacagcagcagcagctacaagaAGCCCAGCATTTCGGTGGCCAAGATCATTGGCGGCACGGACACCTCCCGCTTTGGGGCATCGCCGAACCTGCTctcccagcaccagcatcaccATGCGCACCTGCCCGCCGGCcatcatgcagcagcagcagctgcggcgcACTCCCATCAGGCACAGCTGAGCGCCCAGGAGGCAGCTGCACTGGCAGCGGGCAAGGGAACGCGCCCCAAGCGTGGCAAGTACCGCAACTACGATCGGGACAGCCTCGTGGAGGCCGTCAAGGCGGTGCAGCGCGGCGAGATGTCCGTGCATCGCGCTGGGAGCTACTACGGCGTGCCCCACTCCACGCTGGAGTACAAGGTGAAGGAGCGGCACTTGATGAGGCCGCGCAAGCGCGAACCCAAACCGCAGCCGGATCTGGTCGGTCTGACGGGACCCGCCAACAAAGTGTGTCCGGAGAAGCTGAAGCCGGGCAACCACATCAACCACACGGGCAACCACCACGGCGTCGGCGGATCCAAGCTGAGCAATGCCCTCAAGAGCAACTCCTCCTCccaggcggcagcggcagcggcggcggccgcAGCAGCCGCGGCCTCAGCAACGGTCCCCAACGGCCTCAAGCTGCCGCTCTTCGATGGGGGGGGACCGCAGTCCTTGGCCTTTCAGTCCAATATGTTTTGGCCCCAGCCGAATGCCGGCAGTGCGTACGGCCTGGACCTGCACCGCATGGCGGAGGCCATGCGCCAGCAGACGAACCAGACGAACGCCCATGAGCAGCCCATGAAGAGCGCCCTGGAGATAGCCGAGCACATGTACGATGGCATCATCCGCAAGAGACTGCAGTCGTCCGGCGATGGGAATggaaacggcagcagcagcagcagcaacggacACGCCCTGGGGCATGGTctgggccatggccatggcaatgCGCTGCTCGATCAGCTGCTGATTAATAAGACGCCCCTGCCGTTCACCAACAATCAGAGCAACGACTACAGGGCCACCTGTTCGAGTGGTGGCGTAGGGGAGCGCATCAAGCGATCGGCGAGTCCCTTGGGCGTTTATGCGGATATCAAGAGGGAGCGTCTGAGTGCGGATAGTGCCAGCAGCGAtgaggagagggagagggaacGCGATCATGATCattccagcaacaacaacaacaacaacagcgatcTGGCgcacaacaagaacaagagcagcagcagcaacaacaagaacaacggaaacagcaacaacaatggtaATGGAAGGAGCCGAATGACCTCCAGGGACTCGGATGCCACGGATGCCAGCAGCCTGAAGAGCGAGCAGAGTAGGCACAGGCACAACAAAATGATGGATCTCAAtggaagcaacagcagcagcagccacaacgaTGGTGACGGTGAGGGCGAGGCGACCctgcccagtcccagtcccaatcccagtGGCAGTCCCAATCCCTGTCCCAGTCGCAATCGCAGTCCTggctgcagcaacagcggcgGCGTTGGCGGCGGCTCCATATTGCACGAGAAGCTGGCCCAGATCAAGGccgagcagctggagcagctggagcagcagcagttataG
- Protein Sequence
- MGRRKWKNYQEQATRSQLNIEEQQPIATAGSDEDEDEPYNKHNHNKSNRNHCKPENHHHHHRLEQEFEEDFENQTSHDSSRTATPISIPSPPPEPNDWRPSDKCNFCVNGRLLTVNAQGQLVAETVAPTAHNCSTSSKGHIYHNDQHDSDSNSSASLQQHSNNSKSGARNIAAAASATPTTGSGTSTGTGTGNSLELYKLLTQRAAKMTSMDSMAAQLAQFSLLAADINLMNSLASQQQQQQQQQQQHPQHNSVTPTTSELLSAAAISPALKDTPSPSADAPLDLSSKPSPNSSISGDVKSIRALSDCPTPTPTPSSGRRAYSEEELNRALQDVMANKLEPRKAARPSLMNKLAHHELEQEEPDEPEDSADEAEVDSNASTPAPPYPEFDQRIAATAQLRKLSGHLSEHNGSEDLGEDLESGGQHSPKLSRIPGPANAVAPGGLPIPIDANVLLHTLMLAAGIGVMPKLDETQTVGDLIKGLLVANTGGIMNEALINLLAASQQENSNGNAASLLLQQQQQQHQHQQQLNAFHHRLPKSETPETSSSLDPNEASEDPILKIPSFKVSGPASISPSISHNHNHSHSHHQQQHQQQQQQQHQHHHHHHNNHSSHSNSNRNGGREHSPHSVSPMLAAAVSNSSASAAAAAAAAGLLSASPTSIQKMMASNIQRQINEQSSQEAAAIAAATSSSSLRNGSTSAGSDCSNNGAASGNNSSSSYKKPSISVAKIIGGTDTSRFGASPNLLSQHQHHHAHLPAGHHAAAAAAAHSHQAQLSAQEAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGPANKVCPEKLKPGNHINHTGNHHGVGGSKLSNALKSNSSSQAAAAAAAAAAAAASATVPNGLKLPLFDGGGPQSLAFQSNMFWPQPNAGSAYGLDLHRMAEAMRQQTNQTNAHEQPMKSALEIAEHMYDGIIRKRLQSSGDGNGNGSSSSSNGHALGHGLGHGHGNALLDQLLINKTPLPFTNNQSNDYRATCSSGGVGERIKRSASPLGVYADIKRERLSADSASSDEERERERDHDHSSNNNNNNSDLAHNKNKSSSSNNKNNGNSNNNGNGRSRMTSRDSDATDASSLKSEQSRHRHNKMMDLNGSNSSSSHNDGDGEGEATLPSPSPNPSGSPNPCPSRNRSPGCSNSGGVGGGSILHEKLAQIKAEQLEQLEQQQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00611274; iTF_00471535; iTF_00473702; iTF_00480785; iTF_00600977; iTF_00487220; iTF_00563822; iTF_00474426; iTF_00580635; iTF_00574732; iTF_00514812; iTF_00535965; iTF_00517632;
- 90% Identity
- iTF_00563822;
- 80% Identity
- -