Dlow005349.1
Basic Information
- Insect
- Drosophila lowei
- Gene Symbol
- Mblk-1
- Assembly
- GCA_008121275.1
- Location
- CM017777.1:35711613-35724193[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.0077 15 5.2 0.0 1 25 300 324 300 325 0.91 2 2 8e-19 1.6e-15 56.4 0.0 1 43 790 833 790 835 0.95
Sequence Information
- Coding Sequence
- ATGGGTCGcaggaaatggaaaaattatCAAGAGCAAGCGACGCGCAGCCAACTGAATATCGAGGAGCAACAGCCAATAGCCACAGCCGGTTccgacgaggacgaggaatcgtccagccacaacaacaaggacaacagcaacagaaaccaCTGTAAACCAGAGAACCAGCACCACCGTTTAGAGCAGCAGTTTGAGGAGGATTTCGAAAACCAAACATCACACGATTCATCACGTACAGCAACACCCATAAGTATACCATCACCACCGCCAGAACCCAACGATTGGAGACCGTCGGACAAGTGCAATTTCTGTGTTAACGGTCGCCTGCTAACCGTGAACGCCCAGGGCCAATTGGTGGCCGAAACGGTggcacccacacccacagccacagcccacagcagcagcactactACCACCAGTAAAGGCCACATATACCACAACGGTCAAcacgacagcgacagcaactcGAGCGCATCGCTGCAGCAGTCTGGGGCACgcaacagcggcaacagcggCAACTCCCTGGAACTGTACAAGCTGCTTACCCAACGGGCAGCCAAAATGACATCAATGGACTCGATGGCCGCACAGCTGGCCCAGTTCTCGCTGCTGGCCGACTTCAATCTGATGAACTCTCTGGCcagccaacaacagcagcaacagcagcagcaacagcaacatccgCCACACAATTCGGTAACAACAACTACCTCAGAACTGCTATCTGCAGCAGCCATCAGTCCCGCACTCAAAGATacacccagtcccagtgccgATGCCCCGCTCGATCTTAGCAGCAAGCCATCGCCAAATTCATCGATTAGCGGCGATGTAAAGTCCATCAGAGCCCTCTCGGACTGTCCCACGCCCACGCCTTCGTCGGGGCGAAGGACCTACAGCGAGGAGGACCTGAACAGGGCCCTGCAGGATGTGACGGCCCACAAGCTGGCACCCCGCAAGGCGGCCAGCCAGCACCGCTCCAGCCTGATGAACAAGCTGGCGCACCACGAGCAGCGGCTCGAGCAGGAGGAGCCGGATGAGCCGGAGGACTCGGCGGACGAGGCTGAGCTGGACAGCAACGCCTCCACCCCGGCACCGGCCTATCCGGAGTTTGCCCAGCGCATCGCGGCCACGGCCCAGCTCCGCAAGCTGAGCAGCCACCTGTCCGAGCACAATGGCAGCGAGGATCTGGGCGAGGATCTGGAGAGCGGGGGCCAGCACTCGCCGAAACTGTCCAGGATACCAGGGCCCGCCAGTGCGGTggcccccatccccatcgaTACCAATGTACTGCTGCACACGCTCATGCTGGCGGCGGGCATCGGTGTGATGCCCAAGGTGGACGAGACCCAGACGGTGGGGGACCTGATCAAGGGCCTGCTGGTGGCCAATACCGGGGGCATTGTGAACGATGCGCTCATCAATCTGCTGGCCGCCAGTCAGCAGGAGACCAGCAACGGCAATGCCGCCAGcctgctcctccagcagcaccagcatcagcagcaccagcagcaattGAATGCCTTTCATCATCGCCTACCAAAGTCTGAAACGCCCGAGACGAGCTCCTCGTTGGACCCCAACGAGGCCAGCGAGGATCCCATACTGAAGATTCCGTCCTTCAAGGTCAGCGGGCCACCCAGCATCTCGCCCAGcatcagccacagccacagccaccatcagcagcagcagcaccaccatcagcagcagcaccaccatcaGCACCCACACCACCACAACAATcacagctccagcagcagctcccacgcccacgcccactcccacgcccacgcccactccaacagcagcagtcggAACGGGGGCGGGGGGAGGGAGCGCAGTCCGCACTCGGCCTCGCCGATGCTGGCCGCCGCTGTGTCCAACAGCAGCGCcagtgccgccgccgccgccggccTGCTCTCGGCCTCGCCCACCTCCATCCAGAAGATGATGGCCAGCAACATCCAGCGGCAGATCAACGAGCAGAGCAGCcacgaggcagcagcagcggcagcagcagttgcgGCAGCgacatccagcagcagcctgcGCAACGGCAGCACTAGCGCCGGCAGCGACTGCAGCAACAATGGGGCAGCAtccggcaacaacaacagcagcagcagcagctacaagAAGCCCAGCATCTCGGTGGCCAAGATCATTGGCGGCACGGACACCTCCCGCTTTGGGGCATCGCCGAACCTGCTctcccagcaccagcaccaccatgCGCACCTGCCCGCCGGCCATCATGCAGCAGCCGCGGCGGCGCACTCCCACCAGGCGCAGCTGAGCGCCCAGGAGGCGGCTGCCCTGGCAGCGGGCAAGGGAACGCGCCCCAAGCGTGGCAAGTACCGCAACTACGACCGGGACAGCCTGGTGGAGGCCGTCAAGGCGGTGCAGCGGGGCGAGATGTCCGTGCATCGGGCTGGGAGCTACTACGGCGTGCCCCATTCCACGCTGGAGTACAAGGTGAAGGAGCGGCACCTGATGAGGCCCCGGAAGCGCGAGCCCAAGCCCCAGCCGGACCTGGTCGGCCTGACGGGACCCGCCAACAAGGTGTGTCCGGAGAAGCTGAAGCCCGGCAACCACATCAACCACACGGGCAACCACCACGGCGTCGGCGGATCGAAGCTGAGCAATGCCCTCAAGAGCAACACCTCCTCCcaggcggcagcggcagcggcggcggccgccgcagcagcggccTCAGCAACGGTCCCCAACGGCCTCAAGCTCTTCGATGGGGTGGCGCCGCAGTTGGGCTTTCAGCCCAATATTTTTTGGCCCCAGCAGAATGCCGGCAATGCGTATGGCCTGGACCTGCACCGCATGGCGGAGGCCATGCGCCAGCAGACGAACCAGACGAACGCCCACGAACGGCCCATGAAGAGCGCCCTGGAGATAGCCGAGCACATGTACGACGGCATCATCCGCAAGACCCTGCAGTCGTCCGGCgatggcaatggaaatgggagcggcagcggcagcagcagcaacagcaacggacACGCCCTGGGCCATGGGCTGGGCCATCATGGCAATGCGCTGCTCGATCAGCTGCTGGTGAATAAGACGCCCCTGCCGTTCACCAACAATCAGAGCAACGACTACCGGGGGGCCACCTGTTCGAGCGGCGGGGGGGAGCGCATCAAGCGATCGGCCAGTCCCTTGGGCGTCTATGCGGATATCAAGAGGGAGCGTCTGAGTGCGGACAGTGCCAGCAGCGATGAGGAGAGGGATcgagagcgggagcgggatCGGGATCATGATCAttccagcaacaacaacaacaacaacagcgaccTGGCgcacaacaagaacaagagcagcagcagcaacaacaacggcaacagcagcaggaacaacaacaacaatggcaatggaagGAGCCGAATGACCTCCAGGGACTCGGACGCCACGGATGCCAGCAGCCTGAAGAGCGATCACAGCAGGCACCGGCACAGGCACAACAAAATGATGGATCTCAAtgggagcaacagcagcagcagccagaacgACGGTGATGGCGacggcgagggcgagggcgagacGACCCACTCGCAGATGcccagtcccaatcccagtggcagtcccaatcccaatccctgccccagtcgcagtcgcagtcctggctgcagcagcagcagcgtcggCGGCTCCATACTGCACGAGAAGCTGGCCCAGATCAAGGCcgagcagctggagcagcagcagcagcagcagttatAG
- Protein Sequence
- MGRRKWKNYQEQATRSQLNIEEQQPIATAGSDEDEESSSHNNKDNSNRNHCKPENQHHRLEQQFEEDFENQTSHDSSRTATPISIPSPPPEPNDWRPSDKCNFCVNGRLLTVNAQGQLVAETVAPTPTATAHSSSTTTTSKGHIYHNGQHDSDSNSSASLQQSGARNSGNSGNSLELYKLLTQRAAKMTSMDSMAAQLAQFSLLADFNLMNSLASQQQQQQQQQQQHPPHNSVTTTTSELLSAAAISPALKDTPSPSADAPLDLSSKPSPNSSISGDVKSIRALSDCPTPTPSSGRRTYSEEDLNRALQDVTAHKLAPRKAASQHRSSLMNKLAHHEQRLEQEEPDEPEDSADEAELDSNASTPAPAYPEFAQRIAATAQLRKLSSHLSEHNGSEDLGEDLESGGQHSPKLSRIPGPASAVAPIPIDTNVLLHTLMLAAGIGVMPKVDETQTVGDLIKGLLVANTGGIVNDALINLLAASQQETSNGNAASLLLQQHQHQQHQQQLNAFHHRLPKSETPETSSSLDPNEASEDPILKIPSFKVSGPPSISPSISHSHSHHQQQQHHHQQQHHHQHPHHHNNHSSSSSSHAHAHSHAHAHSNSSSRNGGGGRERSPHSASPMLAAAVSNSSASAAAAAGLLSASPTSIQKMMASNIQRQINEQSSHEAAAAAAAVAAATSSSSLRNGSTSAGSDCSNNGAASGNNNSSSSSYKKPSISVAKIIGGTDTSRFGASPNLLSQHQHHHAHLPAGHHAAAAAAHSHQAQLSAQEAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGPANKVCPEKLKPGNHINHTGNHHGVGGSKLSNALKSNTSSQAAAAAAAAAAAAASATVPNGLKLFDGVAPQLGFQPNIFWPQQNAGNAYGLDLHRMAEAMRQQTNQTNAHERPMKSALEIAEHMYDGIIRKTLQSSGDGNGNGSGSGSSSNSNGHALGHGLGHHGNALLDQLLVNKTPLPFTNNQSNDYRGATCSSGGGERIKRSASPLGVYADIKRERLSADSASSDEERDRERERDRDHDHSSNNNNNNSDLAHNKNKSSSSNNNGNSSRNNNNNGNGRSRMTSRDSDATDASSLKSDHSRHRHRHNKMMDLNGSNSSSSQNDGDGDGEGEGETTHSQMPSPNPSGSPNPNPCPSRSRSPGCSSSSVGGSILHEKLAQIKAEQLEQQQQQQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00603266;
- 90% Identity
- iTF_00580635;
- 80% Identity
- -