Dobs005492.1
Basic Information
- Insect
- Drosophila obscura
- Gene Symbol
- Mblk-1
- Assembly
- GCA_018151105.1
- Location
- NW:527284-595288[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.005 9 5.8 0.0 1 24 359 382 359 383 0.89 2 2 8.2e-19 1.5e-15 56.3 0.0 1 43 827 870 827 872 0.95
Sequence Information
- Coding Sequence
- ATGGCGGACTGCTCGTTTGCCAGATGTCTGCAGGAGCGGCGGCTCATCAAGCGGGAGCTATCCAAGTGGTCCAAGGATATGCTGCACATTGTCGGCTTAGAACGTGTTGCTGAGGAATTTATGGGTCGcaggaaatggaaaaattatCAAGAGCAAGCGACGCGCAGCCAACTGAATATCGAGGAGCAACAGCCAATAGCTACAGCCGGTtccgacgaggacgaggaaccatacaacaaccacaaccacaacaagagcaacagaaacagaaaccactGTAAACCAGAGAACCACCACCACCGTTTAGAGCAGGAGTTTGAGGAGGATTTTGAGAACCAAACATCACACGATTCATCACGTACAGCAACACCAATAAGTATACCATCACCACCGCCAGAACCCAACGATTGGAGACCGTCGGACAAGTGCAATTTCTGTGTTAACGGTCGCCTGCTAACGGTGAACGCCCAGGGCCAATTGGTGGCCGAAACGGTGGCACCCACAGTCCACAACTGCAGCACAAGCAGTAAAAGTCACATATACCACAACGGTCAACACGACAGTGACAGCAATTCGAGCGCATCGCTGCAGCAACACAGCAATAACAGCAAGTCTGGGGCACGcaacattgttgctgctgctgcaagtgcaacaccaacaaccggcagcggcaccagcaacagcaccggcaccggcaccggcaactCCCTGGAACTGTACAAGCTGCTTACCCAAAGGGCAGCCAAAATGACATCAATGGACTCGATGGCCGCACAGCTGGCCCAGTTCTCGCTGCTGGCGGCTGACTTCAATCTAATGAACTCTCTGgccagccaacagcaacaacagcagcaacatccgcAACATAACTCGGTAACACCAACTACCTCAGAACTACTATCTGCAGCCGCCATCAGTCCCGCACTCAAAGATAcgcccagtcccagtgccgaTGCCCCGCTCGATCTTAGCAGCAAGCCATCGCCAAATTCATCGATTAGCGGCGATGTAAAGTCCATCAGAGCCCTCTCGGACTGTCCCACGCCCACGCCTTCGTCGGGGCGAAGGGCCTACAGCGAGGAGGACCTGAACAGGGCGCTGCAGGATGTGATGGCCAATAAGCTGGAGCCCCGCAAGGCGGCCCGCTCCAGCCTAATGAACAAGCTGGCGCACCACGAGCTCGAGCAGGAAGAGCCGGATGAGCCAGAGGACTCTGCAGACGAGGCTGAGGTGGACAGCAATGCTTCCACCCCGGCACCGCCCTATCCAGAGTTTGACCAACGCATCGCGGCCACGGCCCAGCTACGCAAACTGAGCAGCCACCTGTCCGAGCACAATGGCAGCGAGGATCTGGGCGAGGATCTGGAGAGCGGGGGTCAGCACTCGCCGAAGCTCTCAAGGATCCCTGGCCCCGCCAATGCGGTGGCTCCCGGCGGCCTGCCAATTCCCATCGATGCCAATGTTCTGCTGCACACTCTCATGCTGGCGGCTGGCATCGGTGTGATGCCCAAGCTGGACGAGACCCAAACGGTGGGGGACCTGATCAAGGGCCTGCTGGTGGCCAATACCGGGGGCATTATGAACGAGGCGCTCATGAATCTGCTGGCCGCCAGTCAGCAGGAGaacagcaatggcaatgccgCCAGCTtgctcctgcagcagcagcagcagcaacaccagcaccagcagcaattGAATGCCTTTCATCATCGCCTACCAAAGTCTGAAACGCCCGAGACGAGCTCCTCCCTGGATCCCAATGAGGCCAGTGAGGATCCGATACTGAAGATTCCGTCCTTCAAGGTCAGCGGGCCGGCCAGCATCTCGCCCAGCATcagtcacagccacaaccacagccacagtcaccatcagcagcatcagcagcagcagcaacaccaccaacatcaccatcaccaccacaACAATCACAGCTCCCACTCCAGCAGCAATAGGAACGGGGGCAGAGAGCACAGTCCACACTCGGCCTCGCCGATGCTGGCCGCCGCGGTGTCCAACAGCAGCGCCGCCAGTGCCGCCGCTGGTCTGCTCTCGGCCTCGCCCACCTCCATCCAGAAAATGATGGCCAGCAACATCCAGCGGCAAATCAACGAGCAGAGCAGCCAGGAGGCAGCGGCAATAGCGGCGGCcacatccagcagcagcctgcGCAACGGCAGCACCAGTGCCGGCAGCGACTGCAGCAACAATGGGGCAGCATccggcaacaacagcagcagcagctacaagaAGCCCAGCATTTCGGTGGCCAAGATTATTGGCGGCACGGACACCTCCCGCTTTGGGGCATCGCCGAACCTGCTCtcccagcaccagcatcacCATGCGCACCTGCCCGCCGGCcatcatgcagcagcagctgcggcgcACTCCCATCAGGCGCAACTGAGCGCCCAGGAGGCGGCTGCCCTGGCAGCGGGCAAGGGAACGCGCCCCAAGCGTGGCAAGTACCGCAACTACGATCGGGACAGCCTCGTGGAGGCCGTCAAGGCGGTGCAGCGCGGCGAGATGTCCGTGCATCGGGCCGGGAGCTACTACGGCGTGCCCCACTCCACGCTGGAGTACAAGGTTAAGGAGCGGCACCTGATGAGGCCGCGCAAGCGCGAACCCAAGCCGCAGCCGGACCTGGTCGGTCTGACGGGACCCGCCAACAAGGTGTGTCCGGAGAAGCTGAAGCCGGGAAACCACATCAACCACACGGGCAACCACCACGGCGTCGGCGGATCCAAGCTGAGCAATGCCCTCAAGAGCAACTCCTCCTCccaggcggcagcggcagcggcggcggctgcagcagcagcggcctcAGCAACGGCCCCCAATGGTCTCAAGCTGCCCCTCTTCGATGGGGGTGGACCGCAGTCCTTGGCCTTTCAGTCCAACATGTTTTGGCCCCAGCCGAATGCCGGCAATGCGTACGGCCTGGACCTGCACCGCATGGCGGAGGCCATGCGCCAGCAGACGAACCAGACGAACGCCCATGAGCGACCCATGAAGAGCGCCCTGGAGATAGCCGAGCACATGTACGATGGCATCATCCGCAAGACACTGCAGTCGTCCGGCGATGGAAATGGCAAcggaagcggcagcagcagcagcagcaacggacaCGCCTTGGGGCATGGCctgggccatggccatggcaatgCGCTGCTCGATCAGCTGCTGATTAATAAGACGCCCCTGCCGTTCACCAATAATCAGAGCAACGACTACAGGGCCACCTGTTCGAGCGGTGGCGGTGGGGAACGCATCAAGCGATCGGCGAGTCCCCTGGGCGTCTATGCGGATATCAAGAGGGAGCGTCTGAGTGCGGATAGTGCCAGCAGCGAtgaggagagggagagggaacgCGATCCTGATCattccagcaacaacaacaacaacaacagcgatcTGGCgcacaacaagaacaagagcaggaacagcaacaacaacggcaacagcaacagcaacagcaacaacaatggtaATGGAAGGAGCCGAATGACCTCCAGGGACTCGGATGCCACGGATGCCAGCAGCCTGAAGAGCGAGCAGAGTAGGCACAGGCCCAACAAAATGATGGATCTCAAtgggagcaacagcagcagcagccagaacgATGGTGACGGTGAGGGCGAGGCGACTCtgcccagtcccagtcccaatccCAGTGGCAGTCCCAATCCCTGTCCCAGTCGcactcgcagtcgcagtcctggctgcagcagcagcggtgtcGGCGGCGGCTCCATATTGCACGAGAAGCTGGCCCAGATCAAGGccgagcagctggagcagcagcagttatAG
- Protein Sequence
- MADCSFARCLQERRLIKRELSKWSKDMLHIVGLERVAEEFMGRRKWKNYQEQATRSQLNIEEQQPIATAGSDEDEEPYNNHNHNKSNRNRNHCKPENHHHRLEQEFEEDFENQTSHDSSRTATPISIPSPPPEPNDWRPSDKCNFCVNGRLLTVNAQGQLVAETVAPTVHNCSTSSKSHIYHNGQHDSDSNSSASLQQHSNNSKSGARNIVAAAASATPTTGSGTSNSTGTGTGNSLELYKLLTQRAAKMTSMDSMAAQLAQFSLLAADFNLMNSLASQQQQQQQHPQHNSVTPTTSELLSAAAISPALKDTPSPSADAPLDLSSKPSPNSSISGDVKSIRALSDCPTPTPSSGRRAYSEEDLNRALQDVMANKLEPRKAARSSLMNKLAHHELEQEEPDEPEDSADEAEVDSNASTPAPPYPEFDQRIAATAQLRKLSSHLSEHNGSEDLGEDLESGGQHSPKLSRIPGPANAVAPGGLPIPIDANVLLHTLMLAAGIGVMPKLDETQTVGDLIKGLLVANTGGIMNEALMNLLAASQQENSNGNAASLLLQQQQQQHQHQQQLNAFHHRLPKSETPETSSSLDPNEASEDPILKIPSFKVSGPASISPSISHSHNHSHSHHQQHQQQQQHHQHHHHHHNNHSSHSSSNRNGGREHSPHSASPMLAAAVSNSSAASAAAGLLSASPTSIQKMMASNIQRQINEQSSQEAAAIAAATSSSSLRNGSTSAGSDCSNNGAASGNNSSSSYKKPSISVAKIIGGTDTSRFGASPNLLSQHQHHHAHLPAGHHAAAAAAHSHQAQLSAQEAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGPANKVCPEKLKPGNHINHTGNHHGVGGSKLSNALKSNSSSQAAAAAAAAAAAAASATAPNGLKLPLFDGGGPQSLAFQSNMFWPQPNAGNAYGLDLHRMAEAMRQQTNQTNAHERPMKSALEIAEHMYDGIIRKTLQSSGDGNGNGSGSSSSSNGHALGHGLGHGHGNALLDQLLINKTPLPFTNNQSNDYRATCSSGGGGERIKRSASPLGVYADIKRERLSADSASSDEERERERDPDHSSNNNNNNSDLAHNKNKSRNSNNNGNSNSNSNNNGNGRSRMTSRDSDATDASSLKSEQSRHRPNKMMDLNGSNSSSSQNDGDGEGEATLPSPSPNPSGSPNPCPSRTRSRSPGCSSSGVGGGSILHEKLAQIKAEQLEQQQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00603266;
- 90% Identity
- iTF_00603266; iTF_00600977; iTF_00487220; iTF_00474426; iTF_00514812;
- 80% Identity
- -