Dsub003870.1
Basic Information
- Insect
- Drosophila subobscura
- Gene Symbol
- Mblk-1_1
- Assembly
- GCA_008121235.1
- Location
- NC:18592566-18643678[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.013 24 4.3 0.0 1 24 354 377 354 378 0.83 2 2 7.1e-19 1.3e-15 56.3 0.0 1 43 819 862 819 864 0.95
Sequence Information
- Coding Sequence
- ATGGCTGACTGCTCGTTTGCCAGATGTCTGCAGGAGCGGCGTCTCATCAAGCGGGAGCTCTCCAAGTGGTCCAAGGATATGCTGCATATTGTGGGCTTAGAACGTGTTGCTGAGGAATTTATGGGTCgcaggaaatggaaaaattatcAAGAGCAAGCGACGTGCAGCCAACTGAATATCGAGGAGCAACAGCCAATAGCTACAGCCGGTTccgacgaggacgaggcaccatacaacaaccacaacaagagcaacagaagCCACTGTAAACTAGagaaccaccaccaccgtTTAGAGCAGAAGATTGAGGAGGATTTTGAAAACCAAACATCACACGGCTCATCACGTACAGCAACACCCATTAGTATACCATCACCACCGCCAGAACCCAACGATTGGAGACCGTCGGACAAGTGCAATTTCTGTGTTAACGGTCGCCTGCTAACGGTGAACGCCCAGGGCCAATTGGTGGCCGAAACGGTggcacccaccacccacaacTGCAGTACCAGCAGTAAAAGCCACATAAACCACAACGGTCAACACGACAGTGACAGCAATTCGAGCGCATCGCTGCAACAACACAGCAATACCAGCAAGTCTGGGGCACGcaacattgctgctgctgcaagtgcaatAGCAACAACCGGCACCGACAGCGGTACCGGCAACTCCTTAGAACTGTACAAGCTGCTTACCCAACGGGCAGCCAAAATGACATCAATGGACTCGATGGCCGCACAGCTGGCCCAGTTCTCACTGTTGGCGGCCGACTTCAATCTGATGAACAGTCTggccagccaacagcagcagcaacagcaacagcagcagcaccagcaacatcCGCAACATAACTCGGTAACACCAACTACCTCAGAACTACTATCTGCAGCCGCCATCAGTCCCGCACTTAAAGATacacccagtcccagtgccgaTGCCCCGCTCGATCTTAGCAGCAAGCCATCGCCAAATTCATCGATTAGCGGCGATGTAAAGTCCATCAGAGCCCTCTCGGACTGTCCCACGCCCACGCCTTCGTCGGGGCGAAGGGCCTACAGCGAAGAGGACCTGAACCGGGCCCTGCAGGATGTGATGGCCAACAAGCTGGAACCCCGCAAGGCGTCCCGCTCCAGCCTGATAAACAAGCTGGCGCACCACGAGCTCGAGCAGGAAGAGCCGGAAGAGCCGGAGGACTCTGCAGACGAAGCTGAGGTGGACAGCAACGCTTCCACCCCAGCACCGCCCTATCCAGACTTTAGCCAACGCATCGCGGCTACGGAGCAGCTCCGCAAACTTAGCACCCACCTGTCCGAGCACAACGGCAGCGAGGACTTGGGCGAGGATCTGGAGAGTGGGGGACAGCACTCGCCGAAGCTCTCAAGGCATGCAGGACCCGCCAATGCGGTGGCTCCTGGTGGCCTGCCAATCCCCATCGATGGCACTGTTCTGATGCACACTCTCATGCTGGCGGCTGGCATCGGCGTTATGCCAAAGCTGGACGAGACCCAAACGGTGGGGGAACTGATCAAAGGCCTGCTGGTGGCCAACTCCGGAGGCATTATGAACGAGGCGCTCATCAATCTGCTGGCCGCCAGtcagcaggacagcagcaatggcaatgccgcCAGcttgctcctccagcagcagcaacaccagcaccagcagcaattGAATGCCTTTCATCATCGCCTACCAAAGTCTGAAACGCCCGAGACGAGCTCCTCCCTGGATCCCAATGAGGCCAGCGAGGATCCCATACTGAAGATTCCGTCCTTCAAGGTCAGCGGGCCGGTCAGCATCTCGCCCagcatcagccacagccacagccacaacctcaaccaccaccaacagcagcagcagcagcaacagcacccacatcaccatcaccaccacaaCAATCACAGCTCCCACTCCAACAGCAATCGGAACGGGGGCAGAGAGCACAGTCCACACTCGGCCTCGCCGATGCTGGCTGCCGCGGTGTCcaacagcagcgccagtgccgccgctgccggcCTGCTCTCGGCCTCGCCCACCTCCATCCAGAAAATGATGGCCAGCAACATCCAGCGGCAGATCAacgagcagagcagccaggAGGCAGCGGCAATAGCGGCGGccacatccagcagcagcctgcgGAACGGCAGCACTAGCGCCGGCAGCGattgcagcaacaatgggCCAGCCTcgggcaacaacagcagcagcagctacaagaAGCCCAGCATTTCGGTGGCCAAGATCATTGGCGGCACGGACACCTCCCGCTTTGGAGCATCGCCGAACCTGCTctcccagcaccagcatcaccaTGCGCACCTGCCCGCCGGAcatcatgcagcagcagctgcggcgcACTCCCATCAGGCGCAGCTGAGTGCTCAGGAGGCGGCTGCCCTGGCAGCGGGCAAGGGAACGCGTCCCAAGCGTGGCAAGTACCGCAACTACGATCGGGACAGCCTGGTGGAGGCCGTCAAGGCGGTGCAGCGTGGCGAGATGTCCGTGCATCGGGCTGGGAGCTACTACGGCGTGCCCCACTCCACGCTGGAGTACAAAGTGAAGGAGCGGCACTTGATGAGGCCACGCAAGCGCGAGCCCAAGCCGCAGCCAGACCTGGTCGGTCTGACGGGACCCGCCAACAAGATTTGTCAGGAAAAGCTAAAACCGGGGAACCACATCAACCACACGGGCAACCACCATGGCGTCGGCGGATCCAAGCTGAGCAATGCCCTCAAGAGCAATTCCTCCTCccaggcggcagcggcagcagcggcggcagcagcagcagcggcctcAGCAACGGCCCCCAACGGACTGAAGCTGCCGCTCTTCGATGGGGCTGGACCGCAGTCCTTGGCCTTTCAGTCAAATATGTTCTGGGCCCAGCCGAACGCCGGCAGCGCGTTTGGCATGGACCTGCACCGCATGGCGGAGGCCATGCGCCAGCAGACGAACCAGACGAACGCCCACGAGCGACCCATGAACAGCGCCCTGGAAATAGCCGAGCACATGTACGATGGCATCATCCGCAAGACCCTGCAGTCGTCCGGCGATGGGAATGGAAacgggagcggcagcagcagcagcagcaacggacACGCCCTGGGCCATGGAttgggccatggccatggcaatgcGCTGCTCGATCAGCTGCTGGTGAATAAGACGCCCCTGCCGTTCACGAATAATCAGAGCAACGACTACAGGGCCACCTGTTCgagcggtggtggtggggaaCGGATTAAGCGATCGGCGAGTCCCTTGGGCGTCTATGCGGACATCAAGAGGGAGCGTCTGAGTGCGGATAGTGCCAGCAGCGATgatgagagggagagggagcgcgaTCATGATCattccagcaacaacaacaacaacaatagcgaTCTGGCgcacaacaagaacaagagcagcagcagcaacaacaacggcaacagcaacaacaatggaaacGGAAGGAGCCGAATGACCTCCAGGGACTCGGATGCCACGGATGCCAGCTCGCTAAAGAGCGAGCAGAgtaggcacaggcacaggcacaacaAAATGATGGATCTCAatgggagcaacagcagcagcagccagaacgAGGGTGACGGTGAGGGCGAGACGACTctgcccagtcccagtcccaatcccagtggCAGCCCCAATCCCTGTCCCAGTCGCAACCGCAGTcctgcctgcagcagcagcggcgtcagCGGTGGCGGCTCCATATTGCACGAGAAGCTGGCCCAGATTAAggccgagcagctggagcagcagcagttatAG
- Protein Sequence
- MADCSFARCLQERRLIKRELSKWSKDMLHIVGLERVAEEFMGRRKWKNYQEQATCSQLNIEEQQPIATAGSDEDEAPYNNHNKSNRSHCKLENHHHRLEQKIEEDFENQTSHGSSRTATPISIPSPPPEPNDWRPSDKCNFCVNGRLLTVNAQGQLVAETVAPTTHNCSTSSKSHINHNGQHDSDSNSSASLQQHSNTSKSGARNIAAAASAIATTGTDSGTGNSLELYKLLTQRAAKMTSMDSMAAQLAQFSLLAADFNLMNSLASQQQQQQQQQQHQQHPQHNSVTPTTSELLSAAAISPALKDTPSPSADAPLDLSSKPSPNSSISGDVKSIRALSDCPTPTPSSGRRAYSEEDLNRALQDVMANKLEPRKASRSSLINKLAHHELEQEEPEEPEDSADEAEVDSNASTPAPPYPDFSQRIAATEQLRKLSTHLSEHNGSEDLGEDLESGGQHSPKLSRHAGPANAVAPGGLPIPIDGTVLMHTLMLAAGIGVMPKLDETQTVGELIKGLLVANSGGIMNEALINLLAASQQDSSNGNAASLLLQQQQHQHQQQLNAFHHRLPKSETPETSSSLDPNEASEDPILKIPSFKVSGPVSISPSISHSHSHNLNHHQQQQQQQQHPHHHHHHNNHSSHSNSNRNGGREHSPHSASPMLAAAVSNSSASAAAAGLLSASPTSIQKMMASNIQRQINEQSSQEAAAIAAATSSSSLRNGSTSAGSDCSNNGPASGNNSSSSYKKPSISVAKIIGGTDTSRFGASPNLLSQHQHHHAHLPAGHHAAAAAAHSHQAQLSAQEAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGPANKICQEKLKPGNHINHTGNHHGVGGSKLSNALKSNSSSQAAAAAAAAAAAAASATAPNGLKLPLFDGAGPQSLAFQSNMFWAQPNAGSAFGMDLHRMAEAMRQQTNQTNAHERPMNSALEIAEHMYDGIIRKTLQSSGDGNGNGSGSSSSSNGHALGHGLGHGHGNALLDQLLVNKTPLPFTNNQSNDYRATCSSGGGGERIKRSASPLGVYADIKRERLSADSASSDDERERERDHDHSSNNNNNNSDLAHNKNKSSSSNNNGNSNNNGNGRSRMTSRDSDATDASSLKSEQSRHRHRHNKMMDLNGSNSSSSQNEGDGEGETTLPSPSPNPSGSPNPCPSRNRSPACSSSGVSGGGSILHEKLAQIKAEQLEQQQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00603266;
- 90% Identity
- iTF_00563822;
- 80% Identity
- -