g979.t1
Basic Information
- Insect
- Drosophila pseudoobscura
- Gene Symbol
- Mblk-1
- Assembly
- GCA_009870125.2
- Location
- CM020868.1:7068894-7080986[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.24 5.4e+02 0.6 0.0 1 13 290 302 290 314 0.83 2 2 8.9e-19 2e-15 56.4 0.0 1 43 781 824 781 826 0.95
Sequence Information
- Coding Sequence
- ATGGGTCgcaggaaatggaaaaattatCAAGAGCAAGCGACGCGCAGCCAACTGAATATCGAGGAGCAACAGCCCATAGCGACAGCCGGTtccgacgaggacgaggacaacAAGGACAACAGAAACCACTGTAAGCCAGAGAACCAGCACCACCGTTTAGAGCAGCAGTTTGAGGAGGATTTTGATAACCAAACATCACAGGATTCATCACGTACAGCAACACCCATAAGTATACCATCACCACCGCCAGAACCCAACGATTGGAGACCGTCGGACAAGTGCAATTTCTGTGTCAACGGTCGCCTGCTAACGGTGAACGCCCAGGGCCAATTGGTGGCCGAAACGGTggcacccacagccacagtccacagcagcagcagcagcaccagcaaagGCCCCACATACCACAACGGTCaaCACGACAGTGACAGCAACTCGAGCGCATCGCTGCACCAGTCTGGGGCACGCAACATTGCCAACAGCGGCAACTCCCTGGAACTGTACAAGCTGCTCACCCAACGGGCAGCCAAAATGACATCCATGGACTCGATGGCCGCCCAGCTGGCCCAGTTCTCGCTGCTGGCCGACTTCAATCTGATAAACTCTctggccagccagcagcaacagcaacagcagcagcagcagcaacatccgCCACACAACTCGGTAACAACAACTACCTCAGAACTGCTATCGGCAGCCGCCATCAGTGCCCCACTCAAAGATacacccagtcccagtgccgaTGCCCCGCTCGATCTTAGCAGCAAGCCATCGCCAAATTCATCGATTAGCGGCGATGTAAAGTCCATCAGAGCCCTCTCGGACTGCCCCACGCCCACGCCTTCGTCGGGGCGAAGGACCTACAGCGAGGAGGACCTGAACAGGGCCCTGCAGGACGTAACGGCCAGCAAGCTggcaccccgcaaggtggCCGGTCAGCACCGCTCCAGCCTGATGAACAAGCTGGCGCACCACGAGCAGCGGCTCGAGCGACTCGAGCGGCTCGAGCAGGACGAGCCGGATGAGCCGGAGGACTCGGCGGACGAGGCCGAGGTGGACAGCAACGCCTCCACCCCGGCACCGGTCTATCCGGAGCTTGCCCAGCGCATCGCGGCCACGGCCCAGCTCCACAAGCTGAGCAGCCACCTGTCCGAGCACAATGGCAGCGAGGATCTGGGCGAGGACCTCGAGGGCGGGGGCCAGCACTCGCCGAAGCTGTCCAGGATACCAGGGCCCGCCAGTGCGGTGGCACCCATACCCATCGACACGAATGTGCTGCTGCACACGCTCATGCTGGCGGCGGGCATCGGGGTGATGCCCAAGGTGGACGAGACCCAGACGGTGGGGGACCTGATCAAGGGCCTGCTGGTGGCCAACACCGGGGGCATTGTGAACGATGCGCTCATCAACCTGCTCGCGGCCAGCCAGCAGGAGAccagcaatggcaatgccgccagcctgctcctccagcagcaccagcagcagttgaATGCCTTTCACCATCGCCTACCAAAGTCTGAAACGCCCGAGACGAGCTCCTCGCTGGATCCCAACGAGGCCAGCGAGGATCCCATACTGAAGATTCCGTCCTTCAAGGTCAGCGGGCCACCCAGCATCTCGCCCAGcatcagccacagccaccaccagcagcagcagcagcagcacctccttcagcagcagcaccaccaccagcacccaCACCACCACAACAATCATAGCTCCAGCAGCAACTCCCACGCCCACGGCCACGTCCACGCCcactccaacagcagcaatcggaacgggggcggtggcggggggAGAGAGCGCAGTCCGCACTCGGCCTCGCCGATGCTGGCCGCCGCTGTGTCCAACAGCAGCGccagtgccgccgccgccgccgccggcctGCTCTCGGCCTCGCCCACCTCCATCCAGAAGATGATGGCCAGCAACATCCAGCGGCAGATCAACGAGCAGAGCAGCCACGAGGCAGCCGCGGCCGCGGCGGcgacagccagcagcagcctgcgCAACGGCAGCACTAGCGCCGGCAGCGACTGCAGCAACAATGGGGCAGCAtccggcaacaacaacagcagcagcagcagcagctacaagAAGCCCAGCATCTCGGTGGCCAAGATCATTGGCGGCACGGACACGTCCCGCTTTGGGGCGTCGCCGAACCTGCTatcccagcaccagcaccagcaccaccatgCCCACCTGCCCGCCGGCCATCATgcggcggccgcggcggcGCACTCGCACCAGGCGCAACTGAGCGCCCAGGAGGCGGCCGCCCTGGCAGCGGGCAAGGGAACGCGCCCGAAGCGTGGCAAGTACCGCAACTACGACCGGGACAGCCTGGTGGAGGCCGTCAAGGCGGTGCAGCGCGGCGAGATGTCCGTGCATCGGGCTGGGAGCTACTACGGCGTGCCCCACTCCACGCTGGAGTACAAGGTGAAGGAGCGGCACCTGATGAGGCCCCGGAAGCGCGAGCCCAAGCCCCAGCCGGACCTGGTCGGCCTGACGGGACCCGCCAACAAGGTGTGTCCGGAGAAGCTGAAGCCCGGCAACCACATCAACCACACGGGCAACCACCACGGCGTCGGCGGCTCGAAGCTGAGCAATGCCCTCAAGAGCAACACCTCCTCccaggcggcagcggcagcggcggcggcggcggccgccgcagcagcggcctcAGCCACAGTGCCCAACGGCCTCAAGATCTTCGATGGGGTGGCGCCGCAGTTGGGCTTTCAGCCGAATATCTTTTGGACCCAGCAGAATGCCGGCAACGCGTATGGCCTGGACCTGCACCGCATGGCGGAGGCCATGCGCCAGCAGACCAACCAGACGAACGCCCACGAACGACCCATGAAGAGCGCCCTGGAGATAGCCGAGCACATGTACGACGGCATCATCCGCAAGACCCTGCAGTCCTCCGGCGATGGCAATGGAAAcgggagcggcagcggcagcggcagcagcagcaccagcaacggACACGCCCTGGGCCATGGGCTGGGCCACCATGGCAATGCGCTGCTCGATCAGCTGCTGGTGAATAAGACGCCCCTGCCGTTCACCAACAATCAGAGCAATGACTACCGGGGGGCCGCCTGTTCGAGCGGCGGTGGGGAGCGCATCAAGCGATCCGCCAGTCCCTTGGGCGTCTATGCGGATATCAAGAGGGAGCGTCTGAGTGCGGACAGTGCCAGCAGCGATGAGGAGAGGGATCGAGAGCGGGATAGGGATCGGGATCATGATCattccagcaacaacaacaacaacaacagcgacctGGCgcacaacaagaacaagagcagcagcagcaacaacaatggcaacagcagcagcaggaacaacaacaacaatggcaatggccgGAGCCGAATGACCTCCAGGGACTCGGACGCCACGGATGCCAGCAGCCTGAAGAGCGACCACAGCAGGCACCGGCACAGGCACAACAAAATGATGGATCTCAAtgggagcaacagcagcagcagccagaacgacggtgacggtgatggcgatggcgagggCGAGATGACCCACTCGCAGATgcccagtcccaatcccagtggcagtcccaatcccaatccctgccccagtcgcagtcgcagtcctggctgcagcagcagcgccgtcGGCGGCTCCATATTGCACGAGAAGCTGGCCCAGATCAAGGccgagcagctggagcagcagcagcagcagcagttatAG
- Protein Sequence
- MGRRKWKNYQEQATRSQLNIEEQQPIATAGSDEDEDNKDNRNHCKPENQHHRLEQQFEEDFDNQTSQDSSRTATPISIPSPPPEPNDWRPSDKCNFCVNGRLLTVNAQGQLVAETVAPTATVHSSSSSTSKGPTYHNGQHDSDSNSSASLHQSGARNIANSGNSLELYKLLTQRAAKMTSMDSMAAQLAQFSLLADFNLINSLASQQQQQQQQQQQHPPHNSVTTTTSELLSAAAISAPLKDTPSPSADAPLDLSSKPSPNSSISGDVKSIRALSDCPTPTPSSGRRTYSEEDLNRALQDVTASKLAPRKVAGQHRSSLMNKLAHHEQRLERLERLEQDEPDEPEDSADEAEVDSNASTPAPVYPELAQRIAATAQLHKLSSHLSEHNGSEDLGEDLEGGGQHSPKLSRIPGPASAVAPIPIDTNVLLHTLMLAAGIGVMPKVDETQTVGDLIKGLLVANTGGIVNDALINLLAASQQETSNGNAASLLLQQHQQQLNAFHHRLPKSETPETSSSLDPNEASEDPILKIPSFKVSGPPSISPSISHSHHQQQQQQHLLQQQHHHQHPHHHNNHSSSSNSHAHGHVHAHSNSSNRNGGGGGGRERSPHSASPMLAAAVSNSSASAAAAAAGLLSASPTSIQKMMASNIQRQINEQSSHEAAAAAAATASSSLRNGSTSAGSDCSNNGAASGNNNSSSSSSYKKPSISVAKIIGGTDTSRFGASPNLLSQHQHQHHHAHLPAGHHAAAAAAHSHQAQLSAQEAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGPANKVCPEKLKPGNHINHTGNHHGVGGSKLSNALKSNTSSQAAAAAAAAAAAAAAASATVPNGLKIFDGVAPQLGFQPNIFWTQQNAGNAYGLDLHRMAEAMRQQTNQTNAHERPMKSALEIAEHMYDGIIRKTLQSSGDGNGNGSGSGSGSSSTSNGHALGHGLGHHGNALLDQLLVNKTPLPFTNNQSNDYRGAACSSGGGERIKRSASPLGVYADIKRERLSADSASSDEERDRERDRDRDHDHSSNNNNNNSDLAHNKNKSSSSNNNGNSSSRNNNNNGNGRSRMTSRDSDATDASSLKSDHSRHRHRHNKMMDLNGSNSSSSQNDGDGDGDGEGEMTHSQMPSPNPSGSPNPNPCPSRSRSPGCSSSAVGGSILHEKLAQIKAEQLEQQQQQQL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00603266;
- 90% Identity
- iTF_00574732; iTF_00535965;
- 80% Identity
- -