Dstu010683.1
Basic Information
- Insect
- Drosophila sturtevanti
- Gene Symbol
- retn
- Assembly
- GCA_018150375.1
- Location
- JAECWJ010000564.1:2397386-2426384[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3e-26 7.1e-23 80.7 0.0 2 89 295 380 294 380 0.96
Sequence Information
- Coding Sequence
- ATGCAACTGCGTGTGCATCCGACTATGGATTGTAGCGGCCGTTCAAACAACATTGAACGCGATTCCGATTTGGGAGACGATTTGTCACACGGTGATCGAACTGATGACGAGATGAGGGACTGCGATTCGGTGGATGGGGAACAGCATCAGCATCAGCTGAGTGCAAAGGCGGCAATAGCAGCTCGTCTCAGTCACACAGTGGCTGGTGGTCAATTTGCTACCACTGGAGGAGGTGATCAACAGACCGAATTGGCCCTGGGTCATCATCATCCACAATTGCCACCAAATCATCCGTTGAATGCATTAGGCAGCTTCATGGGCATTGGTGGGCTACACAGCATTCCAAATCTACAGCATAGCGATGTCCTTGAGAAACTCAAAATGCAAGTCCGTGACATGAAGGTAGGATTAATGGAGCAGGATTATGCTGCAGCAGCACATGCTGCAGCTTTTGGGGCCAATATGCTACCCACAACCATCAGTTCAGCCTTTCCACTGCCTCATAATTCGGTGGCTGCAGCAGCAGCAGCTGCTACATTTGCACCCACATCAGCCAGTAATGGCGCCAGCTATAATGGTGGGACAGGACCAGGGGGTGGGGGATTACAGGGAAATTCCATTGGCAACACCCCAAATATAAATGGAGCAAATGGGGGCGGAAGCTCCGGTTCTGGCTCTGGATCCGCCTCAACTGGCGGCGGAACACATCCCTTTTCATTCGCCTCACCAACAGCAGCACCCAGCGCCAAAGAAGCTAATTCCGCATCAAATTCATCGACATCCAGCGAGGCATCCAATTCATCGCAACAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTATGAAATCAATGATGATCCGAAGCGAAAAGAGTTTCTCGACGATTTATTCTCGTTTATGCAAAAGCGCGGCACACCCATTAATCGATTGCCTATAATGGCCAAATCTGTATTGGATCTATATGAGCTATACAATCTAGTGATAGCACGCGGCGGCTTGGTCGACGTCATCAATAAGAAGTTGTGGCAGGAGATCATCAAGGGACTCCATTTGCCATCAAGCATCACCAGTGCGGCATTCACCCTGCGTACCCAATACATGAAATATCTCTACCCGTACGAGTGCGAGAAAAAGAATCTGAGCACTCCAGCTGAACTTCAGGCGGCCATTGATGGGAATCGTCGGGAAGGACGCCGCTCCAGCTATGGCCAATATGAGGCTATGCACACTCAGATGCCATTGACGCCCATAGCACGTCCTCCCGGTATGCCCGGAGGCATGCAACAGATGTCGCCTTTGGCCTTGGTCACACATGCAGCGGCCGCTAATAGTCAACAGGCTCAGGCTGCTGCCGCTGCAGCTGTCGCCCATCGTAGTGCACAGGTCGCCCTGTGGCATATGTATCACAACAATAGCAGTTCGCCGGGTTCCGCCCACAATTCCCCACAGCAAGGCGAGGCGCTTAATCTTTCCGACTCACCTCCAAATCTTGCAAACATTAAACGGGAACGGGAACGCGAACCAACGCCTGAGAATGTTGACCAAGAGGAGACGCCGCATCAGCCACCACCCGCCAAACGTGTCGGCAGTGGCCTAATGCCACCCGGTTTTCCGGCCAATTTCTATCTAAATCCCCACAATATGGCCGCAGTGGCAGCTGCAGCAGGCTTCCACCATCAGGCCAATAGTGGAGTACACCATCAACAGCATCATCAACATCCAGATGCCGTGTCAGAGGGTGAACCGGAGGATGAGTATTGCCAAGCCGAGCACAATACCACAGGCAATTCTTCATCTATGAACGATGACAGTGAGCCGCAGCGGTTGAATGGTCACCATCATCATCATCAGAATCATTTGGACAAATCGGATGACTCGGCCATTGAGAATTCGCCGAGTACATCGACAACTACAGCATCGGTGGGTCATCGTCATACCTCACCTGTGTCCACCAAGAAAAAAAATAGCACCAAATGTCAGTCTGGAGTGAAAGAATCGCCGGCCAGTGGGGACAGTGCAGACAGCAGCAACAGCAAACTAAATGCTCACGAAACTCTAAGTCTCCTGTCCAGCATGCAATTCCATGTGGCACGAAATGGTACAGGGGAGAATGGTGAACAGCAGCTGATGGTTAATTTGGAACTAAACGGCATCAAGTATTCGGGTGTTCTAGTGGCCAATGCCAATACTCCAACCGAAAAATCTGATTTAAATCAAGCTTCTACTACATGCAAAGATGAGAACGATGAGCAATCGCATGCTGACGAACAGATGAATGAGGAAGATGAGGATGAGGAGCATAGGGAAGGGCAAGAAGATGAAGATGATCAGGCGGCGGTTGAACGTTCGCCTGTCGAGGAGATTGCCCATAAAGAGGTGACACATGACCAGGATATGGATGCCACTACTGCCATTGTGAATGGCGGTAGCAGTAATGTGGGTGTTGGTGTTGGTGTCGGTGTCGGTGTCAGTGTAGGAGTATCCTTGCTAAAGGATGCTGTGGTCAGTTCATAG
- Protein Sequence
- MQLRVHPTMDCSGRSNNIERDSDLGDDLSHGDRTDDEMRDCDSVDGEQHQHQLSAKAAIAARLSHTVAGGQFATTGGGDQQTELALGHHHPQLPPNHPLNALGSFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISSAFPLPHNSVAAAAAAATFAPTSASNGASYNGGTGPGGGGLQGNSIGNTPNINGANGGGSSGSGSGSASTGGGTHPFSFASPTAAPSAKEANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHTQMPLTPIARPPGMPGGMQQMSPLALVTHAAAANSQQAQAAAAAAVAHRSAQVALWHMYHNNSSSPGSAHNSPQQGEALNLSDSPPNLANIKREREREPTPENVDQEETPHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQANSGVHHQQHHQHPDAVSEGEPEDEYCQAEHNTTGNSSSMNDDSEPQRLNGHHHHHQNHLDKSDDSAIENSPSTSTTTASVGHRHTSPVSTKKKNSTKCQSGVKESPASGDSADSSNSKLNAHETLSLLSSMQFHVARNGTGENGEQQLMVNLELNGIKYSGVLVANANTPTEKSDLNQASTTCKDENDEQSHADEQMNEEDEDEEHREGQEDEDDQAAVERSPVEEIAHKEVTHDQDMDATTAIVNGGSSNVGVGVGVGVGVSVGVSLLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00483462; iTF_00500825; iTF_00523465; iTF_00503034; iTF_00570902;
- 90% Identity
- -
- 80% Identity
- -