Dequ012270.1
Basic Information
- Insect
- Drosophila equinoxialis
- Gene Symbol
- retn
- Assembly
- GCA_018150345.1
- Location
- JAECWI010000600.1:2254659-2280694[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.9e-26 8.6e-23 80.6 0.0 2 89 306 391 305 391 0.96
Sequence Information
- Coding Sequence
- ATGCAACTGCGTGTGCATCCTACTATGGATTGTAGCGGCCGTTCAAATAACATTGAACGCGATTCCGATTTGGGAGACGATTTGTCACACGGTGATCGAACTGATGACGAGATGAGGGACTGCGATTCGGTGGACGGTGAACAGCATCAGCATCAGCTTAGTGCCAAGGCAGCTATAGCAGCCCGTCTCAGTCACACAGTAGCCGGTGGCCAATTTGCTGCCACTGGCGGAGAACAGCAAGCGGAACTGGCCCTGGGTCATCATCATCCACAGCTGCCGCCCAATCACCCGCTGAACGCATTGGGCAACTTTATGGGCATCGGTGGATTACACAGCATTCCAAATCTGCAGCATAGCGATGTGTTGGAGAAGCTCAAGATGCAGGTGCGTGACATGAAGGTTGGACTGATGGAGCAGGACTATGCCGCGGCAGCTCATGCTGCTGCGTTTGGCGCCAACATGCTGCCCACAACAATCAGTTCAGCTTTTCCACTGCCTCACAATTCAGTGGCTGCAGTAGCTGCAGCAGCGGCCACTTTTGCTCCCACATCGGTCAGCAATGGAGCCAGCTATAATGGAGGAAGCGGTGGGAATTCCATCGCCAACAACACAACCGCAAATGGAGCACCAGGGGGCGGCGGCGGCACTGGGTCCGGCACCGTCTCCATGTCAGGAGCTGGCGCAGGATCCGTTTCCACTGGCGGTGGGTCCCATCCCTTTTCATTTGCCTCCCCCACAGCAGCACCCAGCGCCAAAGAAGCCACCTCCTCCTTACGACACTTTGCAGCTAATTCCGCTTCAAATTCATCGACATCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTATGAAATTAATGACGATCCCAAGCGCAAAGAGTTTCTCGATGATTTGTTCTCGTTTATGCAAAAGCGCGGCACACCTATTAATCGATTGCCGATAATGGCCAAATCAGTATTGGATCTATATGAGCTATACAATCTGGTGATAGCTCGCGGCGGCTTGGTCGATGTTATCAATAAGAAGTTATGGCAGGAGATCATAAAGGGACTGCATCTTCCGTCGAGCATTACCAGTGCGGCATTCACCCTACGAACCCAATACATGAAATATCTGTACCCATACGAGTGCGAGAAAAAGAATCTGAGCACTCCAGCTGAACTCCAAGCGGCCATCGATGGGAATCGTCGAGAAGGACGTCGCTCTAGCTACGGTCAATACGAGGCCATGCACAGTCAGATGCCATTGACGCCTATTTCACGGCCACCTGGGATGCCCGGAGGCATGCAACAAATGTCGCCACTGGCCCTGGTCACGCATGCAGCGGCCGCCAACAATCAACAGGCTCAGGCTGCAGCCGCTGCGGCTGTGGCCCATCGCAGGCTGCTGAGTGCTCCTGGATTTGGTCAAATGCCCAATTTGGTAACTCAAGAGATAGAGAATCGTATGATGGACCCGGAGATGAGTACCCGAGAGGCACTTAGTGCTCAGGTCGCCCTGTGGCACATGTACCACAACAACAGCAGCTCGCCGGGTTCCGCCCACAACTCCCCGCAGCAAGGCGAGGCTCTCAACCTTTCAGACTCACCTCCCAATCTCACAAACATAAAGCGGGAACGCGAGCGCGAACCCACGCCTGAACACGTCGACCAAGAGGAGACGCCGCATCAGCCGCCCCCCGCCAAGCGTGTGGGCAGTGGCATAATGCCCCCCGGATTTCCGGCCAACTTCTACCTGAATCCCCACAACATGGCCGCTGTGGCCGCTGCAGCGGGCTTCCACCACCAGGCCAACAGTGGGGCACACCATCACCATCACCATCCAGATGCAGTGTCCGAGGGGGAGCCGGAGGATGATTACAGCCAAGCCGAGCATAATACGACGGGCAATTCTTCCACCATGCACGATGACAGTGAGCCGCAACAGTTAAATGGCCATCACCATCATCAGAATCACTTGGACAAGTCAGATGACTCGGCCATTGAGAATTCGCCAAGCACATCAACCACCACAGCATCGGTGGGCCACCGGCACAGTTCGCCAGTGTCCACCAAGAAGAAGTGTTCCACCAAAAGTCAGTCTGGATGCAAGGATTCGCCAGCCAGCGGGAAAAGTTCAGTCGCAAGTAGTGGCAAGCTGAATGCCCTAGAGACACTAAGTCTGCTATCCAGCATGCAGTTCCAAGTGGCGCGCAATGGTACAGGCGAGAATGGCGAATCACAGCTAACTGTTAACTTGGAGCTGAATGGCATCAAGTATTCGGGCGTTCTTGTGGCCAATGTTAACCCCTCAGACGAAAGAACAGATGCTAGTAGAGGTTCGGAGACATGCCATGATAAGACCGATGAGCAACCGCATGCTGACGCTCAAAACGAGAACGGCGCAGACGACGACGACGATGCTAGGGAGGAGGACGACGACGATGAGCCGGCTGCGGTTGAATGTTCTTCTGCCAAGGAGATTGTCCTAAACGAAGCATCTCTTGATCAGGATATGGATGCCACTGCCATTGTGAATGGTGGCAGCAATAGTGTGGGTGTGGGTGTGGGTGTAGGTGTGGGAGTATCATTGCTAAAGGATGCGGTGGTCAGTTCATAG
- Protein Sequence
- MQLRVHPTMDCSGRSNNIERDSDLGDDLSHGDRTDDEMRDCDSVDGEQHQHQLSAKAAIAARLSHTVAGGQFAATGGEQQAELALGHHHPQLPPNHPLNALGNFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISSAFPLPHNSVAAVAAAAATFAPTSVSNGASYNGGSGGNSIANNTTANGAPGGGGGTGSGTVSMSGAGAGSVSTGGGSHPFSFASPTAAPSAKEATSSLRHFAANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHSQMPLTPISRPPGMPGGMQQMSPLALVTHAAAANNQQAQAAAAAAVAHRRLLSAPGFGQMPNLVTQEIENRMMDPEMSTREALSAQVALWHMYHNNSSSPGSAHNSPQQGEALNLSDSPPNLTNIKREREREPTPEHVDQEETPHQPPPAKRVGSGIMPPGFPANFYLNPHNMAAVAAAAGFHHQANSGAHHHHHHPDAVSEGEPEDDYSQAEHNTTGNSSTMHDDSEPQQLNGHHHHQNHLDKSDDSAIENSPSTSTTTASVGHRHSSPVSTKKKCSTKSQSGCKDSPASGKSSVASSGKLNALETLSLLSSMQFQVARNGTGENGESQLTVNLELNGIKYSGVLVANVNPSDERTDASRGSETCHDKTDEQPHADAQNENGADDDDDAREEDDDDEPAAVECSSAKEIVLNEASLDQDMDATAIVNGGSNSVGVGVGVGVGVSLLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00600091;
- 90% Identity
- iTF_00523465; iTF_00570902;
- 80% Identity
- -