Basic Information

Insect: Drosophila emarginata
Gene Symbol: retn
Assembly: GCA_037075365.1
Location: JBAMCD010000324.1:7076380-7088646[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 0.045 1.3e+02 3.4 0.0 2 18 259 275 258 290 0.85

2 3 2.6e-19 7.7e-16 58.6 0.0 16 89 362 433 356 433 0.93

3 3 1.8 5.3e+03 -1.7 0.0 10 39 584 618 575 635 0.66

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	0.045	1.3e+02	3.4	2	18	259	275	258	290	0.85
2	3	2.6e-19	7.7e-16	58.6	16	89	362	433	356	433	0.93
3	3	1.8	5.3e+03	-1.7	10	39	584	618	575	635	0.66

Sequence Information

Coding Sequence: ATGAGGGACTGCGATTCGGTGGACGGGgaacagcatcagcatcagctcAGTGCAAAGGCGGCAATAGCAGCTCGTCTCAGCCACACAGTGGTCGGTGGTCAATTCGCCACCACTGGAGGTGGTGATCAGCAAACCGAATTGGCCCTGggtcatcatcatccacaaTTGCCACCAAATCATCCGTTGAATGCGTTGGGCAGCTTCATGGGTATCGGTGGACTACACAGCATTCCAAATCTTCAGCATAGCGATGTCCTAGAGAAGCTCAAGATGCAAGTACGCGACATGAAGGTGGGATTAATGGAGCAGGATTATGCCGCAGCAGCACATGCTGCTGCTTTCGGGGCCAATATGTTACCCACAACCATCAGTTCAGCCTTTCCACTGCCTCATAATTCGGTGgctgcagcagcggcagctgctGCCACCTTTGCACCCACATCGGCCAGTAATGGAGCCAGTTataatggtggtggtggaacTGGCGGAGGCGGATTACAGGGAAATTCCATTGGGAACACTTCAACCATAAATGGGGCAAACGGTGGCGGTGGATCCGGGTCCGGATCCGCCTCCGCTTCTACTGGTGGCGGCTCACATCCCTTCTCATTCGCCtcaccaacagcagcacctAGTGCCAAAGAAGCTAATTCCGCATCAAATTCATCGACATCCAGTGAGGCATCCAATTCATCGCAACAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTATGAAATCAATGATGATCCGAAGCGAAAAGAGTTTCTTGATGATTTGTTCTCGTTTATGCAAAAGCGCGATAGCATGTGCGTGTTAGGCTCAATGGATCCTTGGATATGGGATCGACGATGTACGAACTTCGATCAGCGATCTCTGATCTTGGATCTCCTCCAGGCAGCTCGATCAATGGTGCTGCTTTTAATGATTCAATTGGATCGGGAGGAGACTGCAACAAAGTTAATCATTAAATTGCCATTGattatgttgctgttgtttgtggCTCCAACTGTGGCTGTGGCTCGTGCAGTGATTGATCCTCACTTTTTGCTTACCTACAAAATAAATCGCACACCCATTAATCGATTGCCGATAATGGCCAAATCCGTATTGGATCTATATGAGCTATACAATCTGGTGATAGCACGCGGCGGTTTGGTCGACGTCATCAATAAGAAGTTGTGGCAGGAGATCATCAAGGGACTACATCTGCCATCGAGCATCACCAGTGCGGCATTTACCCTGCGTACCCAATACATGAAATATCTCTACCCATACGAGTGCGAGAAAAAGAATCTGAGCACTCCAGCTGAACTTCAGGCGGCCATTGATGGGAATCGTCGGGAAGGACGTCGCTCCAGCTATGGTCAATATGAGGCCATGCACAATCAGATGCCATTGACGCCCATTGCACGTCCCCCCGGGATGCCTGGCAGCATGCAACAAATGTCGCCCCTGGCCTTGGTCACGCATGCCGCGGCAGCCAACAGTCAACAGGCACaggctgcagcagctgctgctgtggcgCATCGTAGACTGATGAGTGCTCCTGGTTTCGGTCAAATGCCCAATCTGGTTACCCAAGAGATAGAGAATCGTATGATGGAATATCTCCAGTTGATACAGGCCAAGAAGGAGCAGAGTCTCACACCCATTCATccacatcagcagcagcagcaacagcagcaacagcagcagcaatcacAGCAACAGTCGCAGAcgacacagcagcaacatatccaccaacagcaacaacgtcAGCGTTCCCAAAGTCCGGAGATGAGCACCCGTGAGGCGCTTAGTGCACAGGTCGCCCTGTGGCATATGTatcacaacaacagcagttcGCCGGGTTCCGCCCACAATTCACCACAGCAAGGCGAGGCACTCAATCTTTCCGACTCACCTCCAAGTCTCACCAACATCAAACGTGAACGCGAGCGCGAGCCAACGCCTGAGAATGTGGATCAAGAGGAGACACCACATCAACCACCACCCGCCAAACGTGTGGGCAGTGGCCTCATGCCACCCGGTTTTCCGgccaatttctatttaaatccCCACAATATGGCCGCTGTAGCCGCCGCAGCGGGATTCCACCATCAGGCTAATAGTGGGGCAcaccatcatcagcatcatgaACATCCGGATGGAGTCTCAGAGGGTGAGCCGGAGGATGAGTATTGCCAAGCCGAGCACAATACCACAGGCAATTCCTCATCTATGCACGATGACAACGAACCGCAGCAATTGAAtggccaccaccaccatcatcatcatcagaatCATTTGGACAAATCAGATGACTCGGCCATTGAGAATTCGCCGAGTACATCGACAACCACAGCATCGGTGGGCCACCGTCACAGTTCGCCTGTATCcactaagaaaaaaactacCACCAAATGTCAGTCTGGAGTCAAGGAATCGCACCCCAGCGAGAAAAGTGGAGAGAGCAGTGGCAAACTGAATGCTCTGGAAACCCTAAGCCTCCTATCCAGCATGCAATTCCAAGTGGCACGCAATGGTACAGGCGAGAATGGTGAACAAGAGCTGATGGTTAACTTGGAGCTTAACGGCATTAAGTATACGGGTGTTCTAGTGGCCAATCCCAATGCTTCAACCGAAAAGGTGGACTCCAGTAGAGCTTCAACCACATGCAAAGATGAAAACGATGAGCAACCGCAGGCCGACGAACAGATGAATGacgaagatgaagatgaagagaaCAGGGAAGAGGAGGACGATGAAGATGATCAGACTACGGTTGAACGTTCGCCCATTAAGGATATAGCCCAAAAAGAGGTGACACATGACCAAGAAATGGATGCCACTGCTGCCATTGTAAATGGCGGTAATAGTAATTTGGGCGTTGGTGTCGGGGTCGGTGTCGGAGTCAGTGTGGGAGTGTCCTTGCTAAAGGATGCTGTCGTCAGTTCATAG
Protein Sequence: MRDCDSVDGEQHQHQLSAKAAIAARLSHTVVGGQFATTGGGDQQTELALGHHHPQLPPNHPLNALGSFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISSAFPLPHNSVAAAAAAAATFAPTSASNGASYNGGGGTGGGGLQGNSIGNTSTINGANGGGGSGSGSASASTGGGSHPFSFASPTAAPSAKEANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRDSMCVLGSMDPWIWDRRCTNFDQRSLILDLLQAARSMVLLLMIQLDREETATKLIIKLPLIMLLLFVAPTVAVARAVIDPHFLLTYKINRTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPIARPPGMPGSMQQMSPLALVTHAAAANSQQAQAAAAAAVAHRRLMSAPGFGQMPNLVTQEIENRMMEYLQLIQAKKEQSLTPIHPHQQQQQQQQQQQQSQQQSQTTQQQHIHQQQQRQRSQSPEMSTREALSAQVALWHMYHNNSSSPGSAHNSPQQGEALNLSDSPPSLTNIKREREREPTPENVDQEETPHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQANSGAHHHQHHEHPDGVSEGEPEDEYCQAEHNTTGNSSSMHDDNEPQQLNGHHHHHHHQNHLDKSDDSAIENSPSTSTTTASVGHRHSSPVSTKKKTTTKCQSGVKESHPSEKSGESSGKLNALETLSLLSSMQFQVARNGTGENGEQELMVNLELNGIKYTGVLVANPNASTEKVDSSRASTTCKDENDEQPQADEQMNDEDEDEENREEEDDEDDQTTVERSPIKDIAQKEVTHDQEMDATAAIVNGGNSNLGVGVGVGVGVSVGVSLLKDAVVSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00600091;
90% Identity: -
80% Identity: -