Basic Information

Insect: Drosophila paulistorum
Gene Symbol: retn
Assembly: GCA_018152135.1
Location: JAECXG010000822.1:24464097-24493695[-]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 9.6e-26 9.2e-23 80.5 0.0 2 89 306 391 305 391 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	9.6e-26	9.2e-23	80.5	0.0	2	89	306	391	305	391	0.96

Sequence Information

Coding Sequence: ATGCAACTGCGTGTGCATCCTACTATGGATTGTAGCGGCCGTTCAAATAACATTGAACGCGATTCCGATTTGGGAGACGATTTGTCACACGGTGATCGAACTGATGACGAGATGAGGGACTGCGATTCGGTGGACGGTGAACAGCATCAGCATCAGCTTAGTGCCAAGGCGGCAATAGCAGCCCGTCTCAGTCACACAGTAGCCGGTGGCCAATTTGCTGCCACTGGCGGAGAACAGCAAGCGGAACTGGCCCTGGGTCATCATCATCCACAACTGCCGCCCAATCACCCGCTGAACGCATTGGGCAACTTTATGGGCATCGGTGGATTACACAGCATTCCAAATCTGCAGCATAGCGATGTGCTGGAGAAGCTCAAGATGCAGGTGCGTGACATGAAGGTTGGACTGATGGAGCAGGACTATGCCGCGGCGGCTCATGCTGCTGCCTTTGGGGCCAATATGCTGCCCACAACAATCAGCTCAGCTTTTCCACTGCCTCACACTTCAGTGGCTGCAGTAGCTGCAGCAGCGGCCACCTTTGCTCCCACATCGGTCAGCAATGGAGCCAGCTATAATGGAGGAGGCGGTGGGAATACCATCGCCAACAACACAACCACAAATGGAGCACCAGGGGGCGGCGGCGGCACTGGGTCCGGCACCGGGTCCATGTCCGGAGCTGGCGCAGGATCCGTTTCCACAGGCGGTGGGTCACATCCCTTTTCATTTGCCTCCCCCACAGCAGCACCCAGCGCCAAAGAAGCCACCTCCTCCTTACGACACTTTGCAGCTAATTCCGCTTCAAATTCATCGACATCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTATGAAATTAATGACGATCCCAAGCGCAAAGAGTTTCTCGATGATTTGTTCTCGTTTATGCAAAAGCGCGGCACGCCTATTAATCGATTGCCGATAATGGCCAAATCAGTATTGGATCTATATGAGCTATACAATCTGGTGATAGCTCGCGGCGGCTTGGTCGATGTTATCAATAAGAAGTTATGGCAGGAGATCATAAAGGGACTGCATCTTCCGTCGAGCATTACCAGTGCGGCATTCACCCTACGAACCCAATACATGAAATATCTGTACCCATACGAGTGCGAGAAAAAAAATCTGAGCACTCCAGCTGAACTCCAAGCGGCCATCGATGGGAATCGTCGAGAAGGACGTCGCTCCAGCTACGGTCAATACGAAGCCATGCACAGTCAGATGCCATTGACGCCCATTTCACGGCCACCTGGGATGCCCGGAGGCATGCAACAAATGTCGCCACTGGCCCTGGTCACGCATGCAGCGGCCGCCAACAATCAACAGGCTCAGGCTGCAGCCGCTGCGGCTGTGGCCCATCGCAGGCTGCTGAGTGCTCCTGGATTTGGTCAAATGCCCAATTTGGTAACTCAAGAGATAGAGAATCGTATGATGGAGTACCTACAGCTGATCCAGGCCAAAAAGGAGCAGAGTCTCACACCCATTCATCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCCAAAGCCCGGAGATAAGTACCCGCGAGGCACTTAGTGCTCAGGTCGCCCTGTGGCACATGTACCACAACAACAGCAGCTCGCCGGGTTCCGCCCACAACTCCCCGCAGCAAGGCGAGGCTCTCAACCTTTCAGACTCCCCTCCCAATCTCACAAACATAAAGCGGGAACGCGAACGCGAACCCACGCCTGAACACGTCGACCAAGAGGAGACGCCGCATCAGCCGCCCCCCGCCAAGCGTGTGGGCAGTGGCATAATGCCCCCCGGATTTCCGGCCAACTTCTACCTGAATCCCCACAACATGGCCGCTGTAGCCGCTGCAGCGGGATTCCACCATCAGGCCAACAGTGGGGCACACCATCATCATCAGCATCCAGATGCAGTGTCCGAGGGGGAGCCGGAGGATGATTACAGCCAAGCCGAGCATAATACGACGGGCAATTCTTCCACCATGCACGATGACAGTGAACCGCAACAGTTAAATGGCCATCACCATCATCAGAATCATTTGGACAAGTCAGATGACTCGGCCATTGAGAATTCGCCAAGCACATCAACCACCACAGCATCGGTGGGCCACCGGCACAGTTCGCCTGTGTCCACCAAGAAGAAGTGTTCCACCAAAAGTCAGTCTGGATGCAAGGATTCGCCAGCCAGCGGGAAAAGTTCAGTCGCAAGTAGTGGCAAGCTGAATGCCCTAGAGACACTGAGTCTGCTATCCAGCATGCAGTTCCAAGTGGCGCGCAATGGTACAGGCGAGAATGGCGAATCACAGCTAACTGTTAACTTGGAGCTGAATGGCATCAAGTATTCGGGCGTTCTTGTGGCCAATGTTAATTCCTCAGACGAAAGAACAGATGCTACAAGAGGTTCGGAGACATGCCAAGACAAGAACGATGAGCTACCGCATGCTGACTCTCAAAACGACAACGGCCCAGACGACCACGACGAGGCTAGGGAGGAGGACGACGACGATGAGCCGGCTGCGGTTGAATGTTCTCCTGCCAAGGAGATTGTCCTAAACGAAGCTTCTCTTGATCAGGATATGGATGCCACTGCCATTGTGAATGGTGGCAGCAATAGTGTGGGTATGGCTGTAGGTGTAGGTGGGGGAGTATCCTTGCTAAAGGATGCGGTGGTCAGTTCATAG
Protein Sequence: MQLRVHPTMDCSGRSNNIERDSDLGDDLSHGDRTDDEMRDCDSVDGEQHQHQLSAKAAIAARLSHTVAGGQFAATGGEQQAELALGHHHPQLPPNHPLNALGNFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISSAFPLPHTSVAAVAAAAATFAPTSVSNGASYNGGGGGNTIANNTTTNGAPGGGGGTGSGTGSMSGAGAGSVSTGGGSHPFSFASPTAAPSAKEATSSLRHFAANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHSQMPLTPISRPPGMPGGMQQMSPLALVTHAAAANNQQAQAAAAAAVAHRRLLSAPGFGQMPNLVTQEIENRMMEYLQLIQAKKEQSLTPIHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQSPEISTREALSAQVALWHMYHNNSSSPGSAHNSPQQGEALNLSDSPPNLTNIKREREREPTPEHVDQEETPHQPPPAKRVGSGIMPPGFPANFYLNPHNMAAVAAAAGFHHQANSGAHHHHQHPDAVSEGEPEDDYSQAEHNTTGNSSTMHDDSEPQQLNGHHHHQNHLDKSDDSAIENSPSTSTTTASVGHRHSSPVSTKKKCSTKSQSGCKDSPASGKSSVASSGKLNALETLSLLSSMQFQVARNGTGENGESQLTVNLELNGIKYSGVLVANVNSSDERTDATRGSETCQDKNDELPHADSQNDNGPDDHDEAREEDDDDEPAAVECSPAKEIVLNEASLDQDMDATAIVNGGSNSVGMAVGVGGGVSLLKDAVVSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00600091;
90% Identity: iTF_00503034;
80% Identity: -