Daus012028.1
Basic Information
- Insect
- Drosophila austrosaltans
- Gene Symbol
- retn
- Assembly
- GCA_035045865.1
- Location
- JAWNOQ010000073.1:12083487-12096512[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6e-26 1.5e-22 80.5 0.0 2 89 318 403 317 403 0.96 2 2 2.6 6.3e+03 -1.7 0.0 10 39 554 588 545 606 0.66
Sequence Information
- Coding Sequence
- ATGCATAAAAAACCAAGAAGCCGTGATGAAGCTTACAGCTTGAATTCACTGGAGTTGGAGTCGTTCTCGGTCATGCGTGATGGACTTCTTGCACAACAGTCACGGCTAGTGCTGGGACTGTTGCTGGTCCTTTGCCAAGAAGCAGAATGGTCACACGGCGATCGAACTGATGACGAGATGAGGGACTGCGATTCGGTGGACGGGGAACAGCATCAGCACCAGCTCAGTGCAAAAGCGGCAATAGCCGCTCGTCTCAGTCACACAGTAGCCGGTGGTCAATTTGCCAACACTGGCGGTGGGGATCAGCAAACCGAATTGGCCCTGggtcatcatcatccacaATTGCCACCGAACCATCCGTTAAATGCATTGGGCAGCTTTATGGGCATTGGTGGACTTCACAGCATTCCAAATCTTCAGCATAGCGATGTACTGGAGAAGCTCAAGATGCAAGTGCGCGACATGAAGGTGGGATTAATGGAGCAGGATTATGCCGCAGCAGCTCATGCTGCTGCCTTTGGGGCCAATATGTTACCCACAACCATCAGTTCAGCCTTTCCACTGCCTCATAATTCGgtggctgcagcagcagcagccgctgcCACTTTTGCACCCACATCAGCCAGCAATGGAGCCAGTTATAATAATGGTGGTGGTCCTGGCGGACTACAGGGCAATTCCATTGGCAGCACTACAACCATTAACACAGCAAATGGTGGCGGCGGATCTGGATCTGGCTCTGGATCCGGATCCGTTTCGACTGGTGGCGTCTCACATCCCTTCTCATTCGCCTCTCCAACAGCAGCACCCAGTGCCAAAGAAGCTAATTCCGCATCAAATTCATCGACATCCAGCGAGGCATCCAATTCATCGCAACAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTATGAAATCAATGACGATCCCAAGCGAAAAGAGTTTCTTGATGACTTGTTCTCGTTTATGCAAAAGCGCGGCACACCCATTAATCGATTGCCGATAATGGCCAAATCGGTATTGGATCTATATGAGCTGTACAATCTGGTGATAGCGCGCGGCGGCTTGGTCGACGTCATCAATAAGAAATTGTGGCAGGAGATCATCAAGGGACTTCATCTGCCATCGAGCATCACCAGTGCGGCATTTACCCTGCGTACCCAATACATGAAATATCTCTACCCATACGAGTGCGAGAAGAAGAATCTGAGCACTCCAGCTGAACTTCAAGCGGCCATTGATGGGAATCGTCGGGAAGGACGTCGCTCCAGCTATGGTCAATATGAGGCCATGCACAATCAAATGCCATTGACGCCGATTGCGCGTCCGCCCGGAATGCCCGGCGGCATGCAACAAATGTCGCCCTTGGCCTTGGTCACACACGCCGCGGCAGCTAACAGTCAACAGGCTCAGGCTGCAGCCGCCGCAGCTGTGGCTCATCGGAGGTTGATGAGTGCTCCTGGTTTCGGCCAAATGCCCAATCTAGTTACCCAAGAGATAGAGAATCGTATGATGGAATACCTCCAGCTAATACAGGCCAAGAAGGAGCAGAGTCTTACACCCATTCATccacatcaacagcagcaacagcagcaacaacagcagcagcaatcgcAGCAACAGTCGCAGACGACCCAGCAACAACATAtccaccagcagcaacagcgtcAGCGCTCCCAAAGTCCAGAGATGAGTACCCGCGAGGCGCTTAGTGCACAGGTCGCCCTGTGGCACATGTATCACAACAATAGCAGTTCACCGGGTTCGGCCCACAATTCCCCACAGCAAGGcgaGGCGCTCAATCTTTCCGACTCACCTCCCAATCTCACCAACATCAAGCGGGAACGCGAACGCGAACCAACGCCTGAAAATGTGGACCAAGAGGAAACACCACATCAGCCACCACCCGCCAAGCGTGTGGGCAGTGGTCTTATGCCACCCGGTTTTCCGGCAAATTTCTATCTAAATCCCCACAATATGGCAGCAGTGGCCGCTGCAGCTGGTTTCCACCACCAGGCTAATAGTGGGACAcaccatcagcaacatcatGAACATCCTGATGCAGCATCAGAGGGTGAGCCCGAGGATGAGTATTGCCAAGCCGAGCACAATACCACAGGCAATTCCTCATCTATGCATGACGACAGTGAGCCGCAGCAGTTGAATGGCCACCACCATCATCAGAATCATTTAGACAAGTCGGATGACTCCGCCATTGAAAATTCGCCGAGTACATCGACAACCACTGCATCGGTGGGCCACCGTCACAGTTCACCTGTGTCCACCAAGAAAAAGAATACCACCAAATGTCAGTCTGGAGATAAGGAATCGCCAGTTGGTGAGAAAAGTGCAGACAGCAGTGGCAAACTGAATGCTCTGGAAACCTTAAGTCTCCTTTCCAGCATGCAATTCCAAGTGGCACGCAATGGTACAGGCGAGAATGGTGAACAAGAGCTGATGGTTAACTTGGAGCTTAATGGCATCAAGTATTCGGGTGTTCTAGTGGCCAATCCCAAAACTCAAACTGAAAAGGTAGATTCGAGTCGAGGCACAACCACATGCAAAGATGGCAAGGAAGAGCATCCGCATGCTGATGAACAGGCGCCAAATGACGAAGATGACGATGAGGAGAATAGGGATGAGGAGGACGAGGAAGATGATCAGGCAGCGGTCGAACGTTCGCCTCTTAAGGAGATTTCCCAAAAAGAGGTGACACTTGACCAGGATGTGGATGCCACTGCTGGCATTATAAATGGCGCCAACAGTAATGTGGGCGTTGGTGTCGGTGTCGGTGTCAGTGTAGGAGTATCCTTGCTAAAGGATGCTGTGGTCAGTTCATAG
- Protein Sequence
- MHKKPRSRDEAYSLNSLELESFSVMRDGLLAQQSRLVLGLLLVLCQEAEWSHGDRTDDEMRDCDSVDGEQHQHQLSAKAAIAARLSHTVAGGQFANTGGGDQQTELALGHHHPQLPPNHPLNALGSFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISSAFPLPHNSVAAAAAAAATFAPTSASNGASYNNGGGPGGLQGNSIGSTTTINTANGGGGSGSGSGSGSVSTGGVSHPFSFASPTAAPSAKEANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPIARPPGMPGGMQQMSPLALVTHAAAANSQQAQAAAAAAVAHRRLMSAPGFGQMPNLVTQEIENRMMEYLQLIQAKKEQSLTPIHPHQQQQQQQQQQQQSQQQSQTTQQQHIHQQQQRQRSQSPEMSTREALSAQVALWHMYHNNSSSPGSAHNSPQQGEALNLSDSPPNLTNIKREREREPTPENVDQEETPHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQANSGTHHQQHHEHPDAASEGEPEDEYCQAEHNTTGNSSSMHDDSEPQQLNGHHHHQNHLDKSDDSAIENSPSTSTTTASVGHRHSSPVSTKKKNTTKCQSGDKESPVGEKSADSSGKLNALETLSLLSSMQFQVARNGTGENGEQELMVNLELNGIKYSGVLVANPKTQTEKVDSSRGTTTCKDGKEEHPHADEQAPNDEDDDEENRDEEDEEDDQAAVERSPLKEISQKEVTLDQDVDATAGIINGANSNVGVGVGVGVSVGVSLLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00600091;
- 90% Identity
- -
- 80% Identity
- -